mRNA_P-wetherbeei_contig9893.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9893.3.1
Unique NamemRNA_P-wetherbeei_contig9893.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: A0A835ZEM3_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM3_9STRA)

HSP 1 Score: 296 bits (759), Expect = 2.570e-99
Identity = 140/198 (70.71%), Postives = 172/198 (86.87%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYDLS+TTFSPDGK+FQVEYATKAVENSGTAIG++CKDG+L+AVEKLLLSK+LVPG+N+RVH V    G A TG  AD RQIV RARDE  +++++YG  I P+LL +R+S YVHYFT+HG+LRPFGA+TL+A YD++ K A+L+MVEPSGV YRYFGCA+GKG+QGAKTE+EKLK+ EMT   A+KH+AK+
Sbjct:    1 MSSTGAGYDLSATTFSPDGKIFQVEYATKAVENSGTAIGIKCKDGILLAVEKLLLSKLLVPGTNKRVHHVTPRIGVAVTGLTADTRQIVNRARDEAANYKESYGDYISPKLLTERVSNYVHYFTMHGSLRPFGASTLIAGYDDETKEAQLHMVEPSGVSYRYFGCAVGKGRQGAKTEIEKLKVMEMTCRVAMKHVAKI 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: D8LT05_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT05_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 6.220e-98
Identity = 143/198 (72.22%), Postives = 167/198 (84.34%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYDLS+TTFSPDGK+FQVEYATKAVENSGTA+GVRCKDGVL+AVEKLL+SKMLV GSNRRVHGV  H G A  G  ADARQIV R RDE   + +NYGS++PP +LADR++QYVHYFTLHG+LRPFGA+ L+A YD + K  ELY+VEPSGV YRYFG A+GKG+Q AKTE+EKLK  +MT  EA+K + K+
Sbjct:    1 MSSTGAGYDLSATTFSPDGKIFQVEYATKAVENSGTAMGVRCKDGVLLAVEKLLISKMLVAGSNRRVHGVSKHVGMAVAGLSADARQIVYRGRDEVAGYIENYGSQMPPSMLADRLAQYVHYFTLHGSLRPFGASVLVAGYDVELKKHELYVVEPSGVMYRYFGAAVGKGRQAAKTEMEKLKFDDMTCKEAMKQVCKI 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: A0A7S4E6P3_9STRA (Proteasome subunit alpha type n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6P3_9STRA)

HSP 1 Score: 279 bits (714), Expect = 2.190e-92
Identity = 132/198 (66.67%), Postives = 165/198 (83.33%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            M+STGAGYDLS TTFSPDG++FQVEYATKAVENSGT +G+RC DGV++ VEK++LSKML+P SNRRV  V  HAG A  G+ AD RQ+V RARDEC S+ D YG  IPP +LA R+++YVHYFT+HGALRPFGA+T++AAYD  +K  ELY++EP+GVC RYFG A+GKG+Q AK+E+EKL L+++T  EALK +AKM
Sbjct:    1 MASTGAGYDLSPTTFSPDGRIFQVEYATKAVENSGTVVGIRCADGVVLGVEKVMLSKMLLPSSNRRVAAVAPHAGVAQAGSTADGRQVVARARDECDSYDDTYGIEIPPSVLAQRLAEYVHYFTIHGALRPFGASTMIAAYDARKKTHELYVLEPTGVCLRYFGAALGKGRQSAKSEIEKLDLTKLTCREALKEIAKM 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: F0YJF1_AURAN (Proteasome subunit alpha type n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJF1_AURAN)

HSP 1 Score: 274 bits (700), Expect = 2.840e-90
Identity = 129/198 (65.15%), Postives = 165/198 (83.33%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            M+STGAGYDLS TTFSPDG++FQVEYATKAVEN+GT +G++CKDGV++ VEK++LSKML+P SNRRV  V AHAG A  G  AD RQ+V RAR+EC ++ + YG  IPP +LA R+S+YVHYFT+HGALRPFG +T++AAYDE EK  +LY++EP+GVC RYFG A+GKG+Q AK+E+EKL L+ +T  +ALK +AKM
Sbjct:    1 MASTGAGYDLSPTTFSPDGRIFQVEYATKAVENAGTVVGMKCKDGVVLGVEKVMLSKMLLPSSNRRVATVSAHAGVAQAGLAADGRQVVARAREECDNYEEVYGIPIPPTVLAQRLSEYVHYFTIHGALRPFGTSTMIAAYDEREKAHQLYVLEPTGVCLRYFGAALGKGRQSAKSEIEKLDLTTLTCRDALKEIAKM 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: K3W7I2_GLOUD (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7I2_GLOUD)

HSP 1 Score: 272 bits (695), Expect = 1.530e-89
Identity = 128/198 (64.65%), Postives = 161/198 (81.31%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYDLS+ TFSPDG++FQVEYA KAVENSGTAIG++C DG+++ VEK LLSKMLV G++RRV+ +D H G +  G +AD RQ+V RAR+E  S++ NYGS IPP +LADR+ QYVHY+TL+G++RPFG + +LA YD DEK   LY VEPSGV Y Y GCAIGKG+Q AKTE+EK KL +MT  EA+K++AK+
Sbjct:    1 MSSTGAGYDLSAGTFSPDGRIFQVEYAKKAVENSGTAIGIKCTDGIIMGVEKTLLSKMLVAGTHRRVYAIDRHVGLSMAGLVADGRQLVNRAREEALSYKKNYGSAIPPHVLADRMGQYVHYYTLYGSIRPFGTSIMLAGYDADEKKPSLYCVEPSGVTYSYRGCAIGKGQQAAKTEIEKYKLFDMTCREAMKYVAKI 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: A0A8K1FFN8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFN8_PYTOL)

HSP 1 Score: 268 bits (685), Expect = 4.880e-88
Identity = 122/198 (61.62%), Postives = 164/198 (82.83%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYD S+ TFSP+G++FQVEYA KAVENSGT IG++CKDG+++AVEK LLSKMLVPG++RR++ +D H G +  G +AD RQ+V RAR+E  S++ NYGS +PP +LA+R+ QYVHY+TL+G++RPFGA+ +L+ YD DE+   L+M+EPSGV Y Y GCAIGKG+Q AKTE+EK KL ++T  EA+K++AK+
Sbjct:    1 MSSTGAGYDWSAGTFSPEGRIFQVEYAKKAVENSGTTIGIKCKDGIIMAVEKTLLSKMLVPGTHRRIYAIDRHIGLSMAGLVADGRQLVNRAREEALSYKKNYGSPVPPHILAERMGQYVHYYTLYGSVRPFGASIILSGYDADEEKTTLHMIEPSGVTYSYRGCAIGKGQQAAKTEIEKYKLFDLTCREAMKYVAKI 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: A0A7S2UY62_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY62_9STRA)

HSP 1 Score: 269 bits (687), Expect = 5.880e-88
Identity = 127/200 (63.50%), Postives = 163/200 (81.50%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDE--KHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYD S TT+S DG+++QVEYA+KAVEN GTA+G+ CKDGV++ VEK L+SKMLVPGSNRR+H V  +AG A  G +AD RQI+ RARDEC S++D+Y   IPP +L++R+SQYVHYFTLHG+LRPFGAA L+A+ D D   +   L+M+EPSG+ YRYFGCA+GKG+QGAKTE+EKLKL +++  + LK  AK+
Sbjct:   23 MSSTGAGYDFSPTTYSTDGRIYQVEYASKAVENRGTALGLNCKDGVVLVVEKPLVSKMLVPGSNRRIHNVGTNAGIALAGLLADGRQIINRARDECRSYKDSYDVAIPPNVLSERLSQYVHYFTLHGSLRPFGAAALIASVDPDNAAQGGALHMIEPSGISYRYFGCAVGKGRQGAKTEIEKLKLQDLSCRDGLKEAAKI 222
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: A0A6V1PKB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PKB9_HETAK)

HSP 1 Score: 266 bits (680), Expect = 3.000e-87
Identity = 131/198 (66.16%), Postives = 157/198 (79.29%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYDLS TTFSP+GKLFQ EYATKAVENSGTAIG+ C+DGV++AVEK+L  K+L  GS +RVH +  HAG A TG +AD RQ+V RAR+E  S +DNYG  +PP +L DR++QYVHYFTL GALRPFG   LLAA+DE+   A L+M+EPSGV YRYFG A GKG+Q AKTE+EKL L  +T  EALK +AK+
Sbjct:    1 MSSTGAGYDLSPTTFSPEGKLFQTEYATKAVENSGTAIGINCRDGVVLAVEKVLKDKLLKAGSAKRVHTLSNHAGLAMTGLVADGRQVVNRAREEIQSFKDNYGYDMPPDVLTDRLAQYVHYFTLSGALRPFGCQVLLAAHDEEAGRARLHMIEPSGVSYRYFGAAAGKGRQAAKTEIEKLNLETLTCREALKEVAKI 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: H3G9D2_PHYRM (PROTEASOME_ALPHA_1 domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G9D2_PHYRM)

HSP 1 Score: 265 bits (678), Expect = 6.030e-87
Identity = 122/198 (61.62%), Postives = 161/198 (81.31%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYD S+ TFSP+G++FQVEYA KAVENSGT IG++C DG+++ VEK LLSKMLVPG++RRV+ +D H G +  G +AD RQ+V RAR+E  ++R NYG  IPP+LLA+R+ Q+VHY+TL+G++RPFG A +LA YD+D   + LY+VEPSGV Y Y GCA+GKG+Q AKTE+EK KL +MT  EA+K++AK+
Sbjct:    1 MSSTGAGYDYSAGTFSPEGRIFQVEYAKKAVENSGTTIGIKCTDGIIMGVEKTLLSKMLVPGTHRRVYAIDRHVGLSMAGLVADGRQLVNRAREEALNYRKNYGCSIPPQLLAERMGQFVHYYTLYGSIRPFGTAIMLAGYDQDTNKSSLYVVEPSGVTYSYRGCALGKGQQSAKTEIEKYKLFDMTCREAMKYVAKI 198
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BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Match: A0A1W0AAI8_9STRA (Proteasome subunit alpha type-3 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0AAI8_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.100e-86
Identity = 125/198 (63.13%), Postives = 161/198 (81.31%), Query Frame = 1 
Query:    1 MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAVEKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHRDNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAELYMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM 594
            MSSTGAGYDLS+ TFSPDG++FQVEYA KAVE+SGTAIG+ C DGV++ VEK+LLSKMLVPG++RR+H VD H G A  G +AD RQ+V RAR+E   ++ NYGS IPP++LADR+SQYVHYFTL+G++RPFG + +LA  D D     L ++EPSGV YR+ GCA+GKG+Q AKTE+EK K+ +MT  EA+K++AK+
Sbjct:    1 MSSTGAGYDLSAGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLVPGTHRRIHAVDRHVGLAMAGLVADGRQLVNRAREEASGYKKNYGSAIPPQILADRMSQYVHYFTLYGSVRPFGTSIMLAGRDVDTGKCYLNVIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKIFDMTCREAIKYIAKI 198
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9893.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEM3_9STRA2.570e-9970.71Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
D8LT05_ECTSI6.220e-9872.22Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
A0A7S4E6P3_9STRA2.190e-9266.67Proteasome subunit alpha type n=1 Tax=Pelagomonas ... [more]
F0YJF1_AURAN2.840e-9065.15Proteasome subunit alpha type n=1 Tax=Aureococcus ... [more]
K3W7I2_GLOUD1.530e-8964.65PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A8K1FFN8_PYTOL4.880e-8861.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2UY62_9STRA5.880e-8863.50Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A6V1PKB9_HETAK3.000e-8766.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3G9D2_PHYRM6.030e-8761.62PROTEASOME_ALPHA_1 domain-containing protein n=22 ... [more]
A0A1W0AAI8_9STRA1.100e-8663.13Proteasome subunit alpha type-3 n=2 Tax=Saprolegni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9893contigP-wetherbeei_contig9893:1283..2120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT05
Preferred namePSMA3
PFAMsProteasome,Proteasome_A_N
Model size597
Max annot lvl2759|Eukaryota
KEGG koko:K01537,ko:K02727,ko:K03868
KEGG TC3.A.3.2
KEGG Pathwayko03050,ko03420,ko04066,ko04110,ko04111,ko04114,ko04120,ko04141,ko04310,ko04341,ko04350,ko04710,ko05200,ko05211,map03050,map03420,map04066,map04110,map04111,map04114,map04120,map04141,map04310,map04341,map04350,map04710,map05200,map05211
KEGG ModuleM00337,M00340,M00379,M00380,M00381,M00382,M00383,M00384,M00385,M00386,M00387,M00407,M00411
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000502,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005839,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0007088,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009888,GO:0009896,GO:0009987,GO:0010035,GO:0010038,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016579,GO:0019222,GO:0019538,GO:0019773,GO:0019899,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030071,GO:0030154,GO:0030162,GO:0030163,GO:0030707,GO:0030855,GO:0031090,GO:0031331,GO:0031597,GO:0031625,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0042802,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045202,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046686,GO:0048046,GO:0048468,GO:0048477,GO:0048518,GO:0048522,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051246,GO:0051247,GO:0051336,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060255,GO:0060429,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0090068,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
Exons2
Evalue1.02e-98
EggNOG OGsCOG0638@1|root,KOG0184@2759|Eukaryota
Ec32 ortholog descriptionProteasome, subunit alpha/beta
Ec32 orthologEc-08_004350.1
EC2.3.2.32,3.4.25.1,3.6.3.8
DescriptionThe proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
Cds size597
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko03400,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187115.1121058-CDS-P-wetherbeei_contig9893:1282..13031683187115.1121058-CDS-P-wetherbeei_contig9893:1282..1303Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9893 1283..1303 +
1683187115.1269238-CDS-P-wetherbeei_contig9893:1544..21201683187115.1269238-CDS-P-wetherbeei_contig9893:1544..2120Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9893 1545..2120 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9893.3.1prot_P-wetherbeei_contig9893.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9893 1283..2120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9893.3.1

>prot_P-wetherbeei_contig9893.3.1 ID=prot_P-wetherbeei_contig9893.3.1|Name=mRNA_P-wetherbeei_contig9893.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=199bp
MSSTGAGYDLSSTTFSPDGKLFQVEYATKAVENSGTAIGVRCKDGVLVAV
EKLLLSKMLVPGSNRRVHGVDAHAGFATTGNIADARQIVQRARDECFSHR
DNYGSRIPPRLLADRISQYVHYFTLHGALRPFGAATLLAAYDEDEKHAEL
YMVEPSGVCYRYFGCAIGKGKQGAKTELEKLKLSEMTVAEALKHLAKM*
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mRNA from alignment at P-wetherbeei_contig9893:1283..2120+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9893.3.1 ID=mRNA_P-wetherbeei_contig9893.3.1|Name=mRNA_P-wetherbeei_contig9893.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=838bp|location=Sequence derived from alignment at P-wetherbeei_contig9893:1283..2120+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCAGCACAGGAGCAGGGGTGAGCTGACCGCCGATCACTATGCGACG
CTTGCTCTTGCTTTGCACACGCTCAACGCGGCTGCCGCATTGTGCATGAT
AGTGCCAGGTTGCCGGCGGCTCAAAGCGCAAAGCTTCGTAATCAACGTTG
CCAAGTCAGGATGCGCTTTCCTCCTTGTCTTTAACTAACAGTCTAACTCT
GCTTCCACGGCGCCGTTCTGCCATTTTCGTCAATTCGCTGCCTTATTACC
ACCGCGACGCAGTATGACTTGTCGTCGACGACGTTTTCCCCGGACGGCAA
GCTCTTCCAAGTGGAGTACGCCACCAAAGCCGTGGAGAACAGCGGGACGG
CCATCGGCGTCCGCTGCAAGGATGGGGTGCTCGTGGCCGTGGAGAAACTG
CTGCTCTCCAAGATGCTCGTGCCGGGCAGCAACCGGCGCGTCCACGGCGT
TGACGCACACGCCGGCTTCGCAACGACAGGCAACATCGCCGACGCACGGC
AGATCGTGCAGCGCGCCCGCGACGAGTGCTTCTCCCACCGCGACAACTAC
GGCAGCCGCATCCCGCCGCGCCTACTGGCCGACCGTATCAGCCAGTATGT
GCATTACTTCACGCTGCACGGCGCACTCCGGCCGTTTGGCGCGGCGACGC
TCCTCGCCGCATACGACGAGGACGAGAAGCACGCCGAGCTGTACATGGTG
GAGCCATCGGGCGTGTGCTACCGGTATTTTGGGTGCGCTATCGGCAAGGG
CAAGCAGGGCGCCAAGACGGAGCTGGAGAAGCTCAAATTGTCGGAGATGA
CCGTCGCCGAGGCCCTCAAGCACCTCGCAAAGATGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9893:1283..2120+

>mRNA_P-wetherbeei_contig9893.3.1 ID=mRNA_P-wetherbeei_contig9893.3.1|Name=mRNA_P-wetherbeei_contig9893.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=597bp|location=Sequence derived from alignment at P-wetherbeei_contig9893:1283..2120+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCAGCACAGGAGCAGGGTATGACTTGTCGTCGACGACGTTTTCCCC
GGACGGCAAGCTCTTCCAAGTGGAGTACGCCACCAAAGCCGTGGAGAACA
GCGGGACGGCCATCGGCGTCCGCTGCAAGGATGGGGTGCTCGTGGCCGTG
GAGAAACTGCTGCTCTCCAAGATGCTCGTGCCGGGCAGCAACCGGCGCGT
CCACGGCGTTGACGCACACGCCGGCTTCGCAACGACAGGCAACATCGCCG
ACGCACGGCAGATCGTGCAGCGCGCCCGCGACGAGTGCTTCTCCCACCGC
GACAACTACGGCAGCCGCATCCCGCCGCGCCTACTGGCCGACCGTATCAG
CCAGTATGTGCATTACTTCACGCTGCACGGCGCACTCCGGCCGTTTGGCG
CGGCGACGCTCCTCGCCGCATACGACGAGGACGAGAAGCACGCCGAGCTG
TACATGGTGGAGCCATCGGGCGTGTGCTACCGGTATTTTGGGTGCGCTAT
CGGCAAGGGCAAGCAGGGCGCCAAGACGGAGCTGGAGAAGCTCAAATTGT
CGGAGATGACCGTCGCCGAGGCCCTCAAGCACCTCGCAAAGATGTGA
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