prot_P-wetherbeei_contig9858.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9858.3.1
Unique Nameprot_P-wetherbeei_contig9858.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length170
Homology
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BLAST of mRNA_P-wetherbeei_contig9858.3.1 vs. uniprot
Match: D7G994_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G994_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.870e-17
Identity = 71/193 (36.79%), Postives = 90/193 (46.63%), Query Frame = 0 
Query:    8 EDFGLPFIIPG--TLAPYETSYVKERCHAGMNVLCARIHPAHSDLIASGGVDMTVQFSTFAP---------DDARYASSSVR--------LPAPVLSMDFRPTS-----------GGGLLAGCMDGSSHLLSWGRLGNAIAAYGSTGAEDENDDDYGGDGGGSEGEPRIVASFKDHAKYVVCNRWSADGQLFA 170
            +D   PF++PG  T    + S     CH G NVLCAR  P    ++ASGG DM++Q S  A          D    ASSS R        L APVLSMDF P+S            G LLAG MDGSSHL+S         ++G         ++  G          ++AS K+HAKYVV  R+S   + FA
Sbjct:   66 DDPAAPFVVPGDRTACVRQVSDTLVGCHGGTNVLCARACPGLPGIVASGGADMSLQVSRLAQGLGDNEGNADSGGSASSSSRSTELHRLKLAAPVLSMDFCPSSVPFRGGXXXXXXGLLLAGGMDGSSHLVS------IDGSHGGDAXXXXXXEETNG--------VALLASMKNHAKYVVVCRYSTYRRTFA 244
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9858.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G994_ECTSI2.870e-1736.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 20..170
e-value: 1.5E-9
score: 39.1
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 36..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9858contigP-wetherbeei_contig9858:1877..2386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9858.3.1mRNA_P-wetherbeei_contig9858.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9858 1877..2386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9858.3.1 ID=prot_P-wetherbeei_contig9858.3.1|Name=mRNA_P-wetherbeei_contig9858.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
MTDPAEDEDFGLPFIIPGTLAPYETSYVKERCHAGMNVLCARIHPAHSDL
IASGGVDMTVQFSTFAPDDARYASSSVRLPAPVLSMDFRPTSGGGLLAGC
MDGSSHLLSWGRLGNAIAAYGSTGAEDENDDDYGGDGGGSEGEPRIVASF
KDHAKYVVCNRWSADGQLFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf