mRNA_P-wetherbeei_contig9856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A6H5KVI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI4_9PHAE) HSP 1 Score: 131 bits (330), Expect = 2.290e-33 Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 1 Query: 22 RDLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRRKQVGVSVTLRCVGRARLVGVSQSLPYLSAVASELVDVPDGDAPYPK------LSAEIHELHRQCRQLEAKI 423 R++G LPFP+ D + GET+ LHLYEARFL+LFE A+K H GC+ V+DG L+ V +C+++ W R++VGVSV LRC+GR + V+ PY+ A E+ DV D P + +S+++ LHRQC +LE K+ Sbjct: 66 REIGLLPFPIDDVMCPGETKALHLYEARFLSLFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIVAWEREEVGVSVALRCIGRCEIGDVTNVDPYIRANVREVRDVVGMDEPDEEGEDNGVVSSDVFSLHRQCVELEGKM 205
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S3Y7C9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7C9_HETAK) HSP 1 Score: 100 bits (249), Expect = 1.580e-22 Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 25 DLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGN---LLSVASICNVIRWRRKQVGVSVTLRCVGRARLVGVSQSLPYLSAVASELVDVPDGDAPYPKLSA---EIHELHRQCRQLEAKI 423 +LG LPFP+ D + +GE++ LHLYE+RFL LF+ AM +VE + LSVAS+ + W + VGV+ T++C GR RL GV+Q+ PYLSA + L D G++ + A E+ LH CR L ++ Sbjct: 84 ELGVLPFPIQDLMTLGESKTLHLYESRFLELFQDAMIDREELAVQAIIVEQPSGIGFLSVASLLKIEEWDKLAVGVTATVKCTGRVRLRGVTQAEPYLSADVAYLTDDAPGESQGDAIRALTEEVVGLHASCRGLHLRL 222
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S3X878_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X878_EMIHU) HSP 1 Score: 94.4 bits (233), Expect = 2.080e-20 Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 4 SGESLGRDLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRR--KQVGVSVTLRCVGRARLVGVSQS-LPYLSAVASELVD-VPDGD-APYPKLSAEIHELHRQCRQLEAKI 423 SG L +LG LPFP+ LL GETR +HLYEARF+ LF A HH C+ AV GN+ SV S+ + +R +++GV L+CVGR +L + + YLS D +P + A +AE+ ELH R++E ++ Sbjct: 47 SGSPL--ELGFLPFPLDQALLPGETRQVHLYEARFITLFSEAASKHHDCLGAVLFTPQGNVASVTSLLEIEEFRTGAEEIGVWANLKCVGRVKLKELETTEFDYLSGGVELFTDSLPTEERAEDDAAAAELRELHASVREMEERL 189
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S0TK28_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TK28_HEMAN) HSP 1 Score: 94.0 bits (232), Expect = 3.460e-20 Identity = 54/141 (38.30%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 10 ESLGRDLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRRKQVGVSVTLRCVGRARLVGVSQSLPYLSAVASELVDVP---DGDAPYPKLSAEIHELHRQCRQLEAKI 423 ++ G LGCLPFP+ D LL GET+ LHL+EARFL LFE A + G + + +V +LL+V VI W VGV V + CVGR ++ V PY SA+ D P D + + A+ E H C + +++ Sbjct: 84 DAEGMTLGCLPFPIQDLLLPGETKSLHLFEARFLKLFEEATGKNKGRLVQL-IVNGQDLLNVGCALEVIDWHPLDVGVKVKVVCVGRVQVTKVVGMAPYPSALVQAYSDTPLDVDQQEEFDQCLAQCFEAHDDCVTISSRL 223
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: R1E1S0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E1S0_EMIHU) HSP 1 Score: 94.0 bits (232), Expect = 1.220e-19 Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 25 DLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRR--KQVGVSVTLRCVGRARLVGVSQS-LPYLSAVASELVD-VPDGD-APYPKLSAEIHELHRQCRQLEAKI 423 +LG LPFP+ LL GETR +HLYEARF+ LF A HH C+ AV GN+ SV S+ + +R +++GV L+CVGR +L + + YLS D +P + A +AE+ ELH R++E ++ Sbjct: 360 ELGFLPFPLDQALLPGETRQVHLYEARFITLFSEAASKHHDCLGAVLFTPQGNVASVTSLLEIEEFRTGAEEIGVWANLKCVGRVKLKELETTEFDYLSGGVELFTDSLPTEERAEDDAAAAELRELHASVREMEERL 497
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S0LS06_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS06_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 1.610e-18 Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 28 LGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRRKQVGVSVTLRCVGRARLVGVSQS 297 LG LPFP+ + LL GET+ +HLYEARF LFE A + H GC+ + + GN+ +V S+ V RR+++GV L+CVGR RL + Q+ Sbjct: 79 LGLLPFPLSEALLPGETKQVHLYEARFTRLFEDAAREHGGCLGQLLLTPAGNVAAVTSLLEVEESRRQEIGVWAQLKCVGRVRLTSLRQT 168
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S3WM88_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WM88_9SPIT) HSP 1 Score: 86.3 bits (212), Expect = 2.440e-17 Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 22 RDLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRRKQVGVSVTLRCVGRARLVGVSQS-LPYLSAVASELVDVPDGDAPYPK-----------LSAEIHELHRQCRQLEAKI 423 R+LG LPF + + LL GET+ +HLYEARFL LF A + GC+ + + GN +++ + V RR+ VGV L+CV R RLV + + + A+A + D +G A + L A+I+ ++ C ++ K+ Sbjct: 56 RELGLLPFSIEEALLPGETKEVHLYEARFLKLFTDATQKQAGCLGQLLITPGGNAAAISPLLVVDESRRRDVGVWARLKCVARVRLVEIQGTDYDFAQAIAELIFDAYEGSAWTQEERCAEGDESIDLEAQIYSVYESCFNMQQKL 201
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S2BRE0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BRE0_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 3.300e-16 Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 28 LGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRRKQVGVSVTLRCVGRARLVGVSQS 297 LG LPFPV + LL GET+ +HLYEARF+ LF A + H C+ + + G + ++ + + +R+++ GV L+CVGRARL+ + Q+ Sbjct: 47 LGLLPFPVDEALLPGETKQVHLYEARFIELFANAAEHHGSCVGMLLFGDGGTVDAITPVLMIEEFRKQEFGVWAQLKCVGRARLLELRQT 136
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S4C4Z2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C4Z2_CHRCT) HSP 1 Score: 83.6 bits (205), Expect = 4.230e-16 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 19 GRDLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRRKQVGVSVTLRCVGRARLVGVSQS 297 G+ LG LPF V D +L GET+ +HLYEARF LFE A + +HGC+ + V D + +V S+ V RR+ +GV L+CV R RL + ++ Sbjct: 106 GQKLGLLPFGVADAMLPGETKQVHLYEARFTHLFESATR-NHGCLGQLLVTRDSGVAAVTSLLEVEESRRQDIGVWAQLKCVARVRLTSLEET 197
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Match: A0A7S4J6Y4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Y4_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.670e-16 Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 22 RDLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCMAAVTVVEDGNLLSVASICNVIRWRRKQ--VGVSVTLRCVGRARLVGVSQSLPYLSAVASELVDVPDGDAPYPKLSA 375 R++ LPFP D LL GET+ L LYE RF LFE AM H G + A+ ++ D ++ +C + + R G+ +T+R VGRARLV ++Q PY+ AV E+ D D P + A Sbjct: 119 REICVLPFPYTDVLLQGETKELRLYEDRFTRLFEDAMDRHGG-VVAMGLLADSGIVQTVPVCEIEAFNRMGDGFGIFLTMRAVGRARLVELTQQEPYIKAVCVEVSDGVPADLELPTVVA 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9856.1.1 >prot_P-wetherbeei_contig9856.1.1 ID=prot_P-wetherbeei_contig9856.1.1|Name=mRNA_P-wetherbeei_contig9856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp MSGESLGRDLGCLPFPVGDTLLIGETRHLHLYEARFLALFERAMKTHHGCback to top mRNA from alignment at P-wetherbeei_contig9856:507..1074- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9856.1.1 ID=mRNA_P-wetherbeei_contig9856.1.1|Name=mRNA_P-wetherbeei_contig9856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=568bp|location=Sequence derived from alignment at P-wetherbeei_contig9856:507..1074- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9856:507..1074- >mRNA_P-wetherbeei_contig9856.1.1 ID=mRNA_P-wetherbeei_contig9856.1.1|Name=mRNA_P-wetherbeei_contig9856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig9856:507..1074- (Phaeothamnion wetherbeei SAG_119_79)back to top |