mRNA_P-wetherbeei_contig9809.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: D7FL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL55_ECTSI) HSP 1 Score: 119 bits (298), Expect = 1.710e-29 Identity = 60/82 (73.17%), Postives = 69/82 (84.15%), Query Frame = 1 Query: 1 LLLLYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 L LLYGPAVA FTYC+SF F S ++AQN +L +NF+TGLALMVTSFVL L++ TR NA LK +YRLFPGFCLGDGLAQLVL Sbjct: 1625 LFLLYGPAVAPFTYCISFFFKSASSAQNMVLFINFVTGLALMVTSFVLNLVESTRDINASLKWIYRLFPGFCLGDGLAQLVL 1706
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A835ZC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC34_9STRA) HSP 1 Score: 117 bits (294), Expect = 5.940e-29 Identity = 63/92 (68.48%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 10 LYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLY-------------RLFPGFCLGDGLAQLVL 246 LYGPAVA FTYCLSF F SH++AQN +LLLNF+TGLALMVTSFVL+L+D TRATN L+ Y RLFPGFCLGDGLAQLVL Sbjct: 1623 LYGPAVAPFTYCLSFAFDSHSSAQNVVLLLNFLTGLALMVTSFVLSLLDSTRATNLRLRWFYSMXXXXXXXXXXXRLFPGFCLGDGLAQLVL 1714
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A7S1UE30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE30_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.550e-25 Identity = 54/81 (66.67%), Postives = 64/81 (79.01%), Query Frame = 1 Query: 4 LLLYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 LLLYGPA AAFTY LS+ FSSH+ AQN +L NFITGL LM+TSFVL +I+ T+ N L+ LYRLFPGFCLGD LAQ+ + Sbjct: 799 LLLYGPATAAFTYILSYGFSSHSTAQNFVLFFNFITGLCLMITSFVLNIIENTQEVNYSLRFLYRLFPGFCLGDALAQIAV 879
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A7S3YL20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL20_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 7.740e-25 Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 1 LLLLYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGD 225 L++ +GPA A+ TYC+SFLF SH+ AQN L NF+TGLALM+TSFVL L+D TRA N LK L+RLFP FCLGD Sbjct: 88 LIVSFGPAAASLTYCMSFLFDSHSTAQNLTLFFNFLTGLALMITSFVLDLLDSTRAANLALKHLWRLFPPFCLGD 162
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A7R9U9S9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9S9_9STRA) HSP 1 Score: 105 bits (263), Expect = 8.980e-25 Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 7 LLYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 LLYGPA AAFTY LS+ F SH++AQN +L NFITGL LM+TSFVL L++ T+A N +LK ++R+FP FCLGDGLAQL + Sbjct: 419 LLYGPASAAFTYMLSYAFKSHSSAQNVVLFFNFITGLCLMITSFVLNLLESTQAINYYLKYVFRIFPIFCLGDGLAQLAV 498
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A7S2S251_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S251_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.190e-23 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 LLLLYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 L LLYG A+ FTY +SFLF SH+ AQN +L+LNFITGL L++ SFV+++I+ T+ATN LK LYRLFPG+ LGDGL L + Sbjct: 1303 LFLLYGCAIIPFTYLVSFLFESHSTAQNIVLILNFITGLVLLIASFVMSVIESTKATNNTLKYLYRLFPGYTLGDGLLSLTV 1384
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A1Y1HQP2_KLENI (ABC transporter A family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQP2_KLENI) HSP 1 Score: 100 bits (250), Expect = 5.200e-23 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 1 LLLLYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 LLL YGPAVAA TYCL+F F+ H AAQNA+LL++ TGL L + SF+++LI TR T+ LK +RLFPGFCL DGL+ L L Sbjct: 1262 LLLAYGPAVAALTYCLTFAFTHHAAAQNAVLLVHLFTGLLLSLASFIMSLIKNTRHTSHTLKAFFRLFPGFCLADGLSSLAL 1343
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A7J6H8P5_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6H8P5_CANSA) HSP 1 Score: 93.6 bits (231), Expect = 1.920e-22 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 13 YGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 YG AVA+ TYCLSF FS HT AQN +LL+NF +GL LMV SF++ LI + N++LK +RL PGFC DGLA L L Sbjct: 52 YGLAVASSTYCLSFFFSDHTMAQNVVLLINFFSGLILMVISFIMGLIKSIVSANSFLKNFFRLSPGFCYADGLASLAL 129
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A2P5AGA1_PARAD (ABC transporter A, ABCA n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AGA1_PARAD) HSP 1 Score: 99.0 bits (245), Expect = 2.460e-22 Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 13 YGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 YG AVA+ TYCLSF FS HT AQN +LL+NF TGL LMV SF++ LI T + N++LK +RL PGFC DGLA L L Sbjct: 1275 YGLAVASSTYCLSFFFSDHTMAQNVVLLINFFTGLVLMVISFIMGLIKTTASANSFLKNFFRLSPGFCFADGLASLAL 1352
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Match: A0A097P9N9_HEVBR (ABC transporter family protein n=3 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A097P9N9_HEVBR) HSP 1 Score: 99.0 bits (245), Expect = 2.460e-22 Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 13 YGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALIDRTRATNAWLKGLYRLFPGFCLGDGLAQLVL 246 YG A+A+ TYCL+FLFS HT AQN +LL++F TGL LMV SF++ LI+ TR+ N +LK ++R+ PGFC DGLA L L Sbjct: 1271 YGLAIASSTYCLTFLFSDHTMAQNVVLLVHFFTGLVLMVISFIMGLIETTRSANNFLKNIFRISPGFCFADGLASLAL 1348 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9809.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9809.1.1 >prot_P-wetherbeei_contig9809.1.1 ID=prot_P-wetherbeei_contig9809.1.1|Name=mRNA_P-wetherbeei_contig9809.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp LLLLYGPAVAAFTYCLSFLFSSHTAAQNAILLLNFITGLALMVTSFVLALback to top mRNA from alignment at P-wetherbeei_contig9809:1410..1890+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9809.1.1 ID=mRNA_P-wetherbeei_contig9809.1.1|Name=mRNA_P-wetherbeei_contig9809.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=481bp|location=Sequence derived from alignment at P-wetherbeei_contig9809:1410..1890+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9809:1410..1890+ >mRNA_P-wetherbeei_contig9809.1.1 ID=mRNA_P-wetherbeei_contig9809.1.1|Name=mRNA_P-wetherbeei_contig9809.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig9809:1410..1890+ (Phaeothamnion wetherbeei SAG_119_79)back to top |