mRNA_P-wetherbeei_contig9806.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9806.1.1
Unique NamemRNA_P-wetherbeei_contig9806.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A6H5KY11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY11_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 6.250e-206
Identity = 289/378 (76.46%), Postives = 328/378 (86.77%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNK----EAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKA----ARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGVDSLAGYADVFQRNVDASG +PQLS+IMG CAGGAVYSPAMTDFIFMV+R+SYMFVTGP VVKTVTQEEVTQE LGGA++H TVSGVAH A++ND+EALRA RE + FLPLS K    E PPVR+T D RDR D  LR  +PQD N PYDMK+V++KVVDDN YFEIMPD+ARNITVGFARMEG  VG+V NNP++LAGCLDI SS KA    ARFVRFCDAFN+P+LTFVDVPGFLPGT QEH GIIR G+KLLFA+AEA+VPK+TV+TRKAYGGAYDVMSSKHLRGDMNYAWP+ EVAVMGAKGAVEIIFRG+D+ + E +Y + FCNPM AA RGF+DD+IDPA TRR++C DL++L
Sbjct:  147 GCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTVSGVAHAAYDNDLEALRAARELYGFLPLSCKGDVDEKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKARGGAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKLLFAFAEASVPKLTVITRKAYGGAYDVMSSKHLRGDMNYAWPSGEVAVMGAKGAVEIIFRGKDVGEREKEYTELFCNPMVAARRGFVDDIIDPALTRRILCQDLQLL 524          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A836CAR6_9STRA (Propionyl-CoA carboxylase beta chain mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR6_9STRA)

HSP 1 Score: 584 bits (1505), Expect = 8.870e-206
Identity = 282/370 (76.22%), Postives = 321/370 (86.76%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGVDSLAGYA+VFQRNVDASG++PQLS+IMGPCAGGAVYSPA+TDFI MVR +SYMFVTGPDVVKTVTQE VTQE LGGA+THC+VSGVAH A +ND+ AL+A RE FDFLPLSN+EA PVR T D R+R    LR  IPQDPN PYDM  +++KV+DDNN+++IMPDYA+NI VGF RMEGRTVGVV NNP  LAGCLDI SS K ARFVRFCD+FN+P+LTFVDVPGFLPGTDQE+ GIIR GAKLL+AYAEATVPK+TV+TRKAYGGAYDVMSSKHLRGD+NY+WP  E+AVMGAKGAVEIIFRG+D+A  E +Y D FCNP+ AA RGF+D VIDPA+TR  +C DLE L
Sbjct:  135 GAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVDASGLIPQLSLIMGPCAGGAVYSPALTDFIMMVRNSSYMFVTGPDVVKTVTQETVTQEALGGADTHCSVSGVAHVARDNDLAALKAARELFDFLPLSNREAVPVRSTCDTRERAIPALRRIIPQDPNIPYDMVEIVSKVLDDNNFYQIMPDYAKNIVVGFGRMEGRTVGVVANNPSSLAGCLDINSSTKGARFVRFCDSFNIPLLTFVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYSWPGGEIAVMGAKGAVEIIFRGKDVAAREAEYADLFCNPLNAAKRGFLDAVIDPASTRARLCEDLEAL 504          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A7S3LK18_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK18_9STRA)

HSP 1 Score: 569 bits (1466), Expect = 1.400e-199
Identity = 275/370 (74.32%), Postives = 319/370 (86.22%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGVDSLAGYADVFQRNV+ASGV+PQLSVIMGPCAGGAVYSPA+TDFI MVR TSYMFVTGP+VVKTVT EEVTQEELGGA++H   SGV+H AF+NDVEAL+ TRE FD+LPLSN+E PP R T DP +R D  L   IP DPN PYDM  VI+K+VDD+ +++IMPDYA+NI  GFAR++G T+GVVGN PL +AGCLDI +SVKAARFVRFCDAFN+PILT VDVPGFLPGTDQEHNGIIRQGAKLL+AYAE TVPK+TV+TRKAYGGAYDVMSSKHL+GD NYAWP+AE+AVMGAKGAVEIIFRG+++ +   +Y + F NPM AA RGF+DD+I P++TR+ V  DL +L
Sbjct:  153 GAPVIGLNDSGGARIQEGVDSLAGYADVFQRNVEASGVIPQLSVIMGPCAGGAVYSPAITDFIMMVRDTSYMFVTGPEVVKTVTNEEVTQEELGGAKSHTQKSGVSHLAFDNDVEALKMTRELFDYLPLSNREEPPSRPTKDPIERADPTLDLIIPSDPNVPYDMVTVISKIVDDSTFYQIMPDYAKNIITGFARIDGSTIGVVGNQPLVMAGCLDIDASVKAARFVRFCDAFNIPILTMVDVPGFLPGTDQEHNGIIRQGAKLLYAYAECTVPKITVITRKAYGGAYDVMSSKHLKGDFNYAWPSAEIAVMGAKGAVEIIFRGKNIEEETKNYTERFANPMVAAQRGFVDDIITPSSTRQRVAKDLVIL 522          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A6V1TKP2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TKP2_HETAK)

HSP 1 Score: 566 bits (1459), Expect = 2.210e-198
Identity = 279/370 (75.41%), Postives = 311/370 (84.05%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            GV V+G NDSGGARIQEGVDSL GYADVFQ+NV ASGVVPQ+S+IMGPCAGGAVYSPAMTDF FM++ TSYMFVTGP+VVKTVT E VTQEELGGA TH T SG AH AF+NDVE LRA R+FFDFLPL+NKE  P R + D  +R +  LR  +P DPN PYDM++V+ KVVD+ N FEI P +A+NI   F RMEGRTV ++GNNP  LAGCLDI SS+KAARFVRF DAF +PILTFVDVPGFLPGTDQE+NGIIR GAKLLFAYAEATVPKVTV+TRKAYGGAYDVMSSKHLR D+NYAWPTAEVAVMGAKGAVEIIFRG+D+ +    Y D FCNPM AA RGFIDDVIDPA TR  +C DLE+L
Sbjct:  162 GVPVIGLNDSGGARIQEGVDSLGGYADVFQKNVLASGVVPQISMIMGPCAGGAVYSPAMTDFTFMIKNTSYMFVTGPEVVKTVTNETVTQEELGGAMTHNTKSGCAHAAFDNDVEGLRALRDFFDFLPLNNKEGVPQRASRDDPNRREESLRYLVPDDPNMPYDMRDVVRKVVDEGNIFEIQPHFAKNILCCFGRMEGRTVAIIGNNPTTLAGCLDINSSIKAARFVRFADAFGIPILTFVDVPGFLPGTDQEYNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRADVNYAWPTAEVAVMGAKGAVEIIFRGRDVEENTEKYTDLFCNPMVAAQRGFIDDVIDPADTRMRICEDLEIL 531          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A7S2RD78_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD78_9STRA)

HSP 1 Score: 563 bits (1450), Expect = 3.510e-197
Identity = 275/370 (74.32%), Postives = 317/370 (85.68%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEG+DSLAGYADVFQ+NV ASGVVPQ+S++MGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVT EEVTQEELGGA+TH  +SGVAH AFENDV+ALRATR   D+LPLSN++  PV +T D RDR +  L+  +P DPN  YDM +VI KVVD ++ FEIMP++A+NI   FARMEGRTV V+ NNP +LAGCLDI +SVKAARF+RF +AFN+PI+TFVDVPGFLPGTDQEHNGIIR G+KLLFAYAEATVPK+TV+TRKAYGGAYDVMSSKHLRGD NYAWP+AEVAVMGAKGAVEIIFRG+D+    + Y + F NP+ AA RGF+D +IDP  TRR +C DLE+L
Sbjct:  151 GAPVIGLNDSGGARIQEGIDSLAGYADVFQQNVIASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTNEEVTQEELGGADTHTALSGVAHGAFENDVDALRATRALLDYLPLSNRDKVPVVQTEDTRDRLEPSLQHLVPDDPNLGYDMTSVIQKVVDRSSMFEIMPNFAKNILCAFARMEGRTVAVIANNPSHLAGCLDIDASVKAARFIRFANAFNIPIVTFVDVPGFLPGTDQEHNGIIRHGSKLLFAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDTNYAWPSAEVAVMGAKGAVEIIFRGKDVEAETNKYTERFANPLLAAQRGFVDAIIDPQETRRRICEDLEML 520          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: UPI001E1D35CE (propionyl-CoA carboxylase beta chain, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D35CE)

HSP 1 Score: 563 bits (1450), Expect = 4.630e-197
Identity = 269/370 (72.70%), Postives = 318/370 (85.95%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGV+SLAGYAD+FQRNV+ASGV+PQ+S+IMGPCAGGAVYSPA+TD+ FMV+ TSY+F+TGPDVVK+VT E+VTQEELGGA+TH T+SGVAHRAFENDV+ L   REFFDFLPLSN++  P+RE  DP DR+  GL + +P +    YD+K+V+T V DD+++FEIMP+YA+NI VGF+RM GRTVG+VGN P   AGCLDI +SVK ARFVRFCD+FN+PI+TFVDVPGFLPGT QE+ GIIR GAKLLFAYAEATVPK+TV+TRKAYGGAYDVMSSKHLRGD NYAWPTAEVAVMGAKGAV IIFRG+D AK E +YV+ F NP  AA RGF+DD+I+P  TRR +C DL+VL
Sbjct:  159 GAPVIGLNDSGGARIQEGVESLAGYADIFQRNVNASGVIPQISLIMGPCAGGAVYSPALTDYTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTISGVAHRAFENDVDGLLQVREFFDFLPLSNQDPAPIRECYDPWDRDVPGLDTVVPLETTAAYDIKDVMTSVADDSHFFEIMPNYAKNIVVGFSRMNGRTVGMVGNQPKVAAGCLDINASVKGARFVRFCDSFNIPIVTFVDVPGFLPGTSQEYGGIIRHGAKLLFAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDTNYAWPTAEVAVMGAKGAVSIIFRGKDQAKNEAEYVEKFANPFPAAVRGFVDDIIEPRTTRRRICLDLDVL 528          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A0S7KBE4_9TELE (PCCB (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KBE4_9TELE)

HSP 1 Score: 557 bits (1436), Expect = 2.150e-196
Identity = 274/371 (73.85%), Postives = 319/371 (85.98%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQD-LAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGV+SLAGYAD+F RNV ASGVVPQ+S+IMGPCAGGAVYSPA+TDF FMV+ TSY+F+TGPDVVK+VT E+VTQEELGGA+TH TVSGVAHRAFENDVEAL   REFF+FLPLSN++  PVRE  DP DR    L + +P +  + YDM ++I  +VD+ ++FEIMP+YA+NI VGFARM GRTVG+VGN P   +GCLDI SSVK ARFVRFCDAFN+PI+TFVDVPGFLPGT QE+ GIIR GAKLL+AYAEATVPK+TV+TRKAYGGAYDVMSSKHLRGD+NYAWPTAEVAVMGAKGAV+IIFRG++  A+AE +YVD F NP  AA RGF+DD+I+PA TRR +CSDLEVL
Sbjct:   62 GAPVIGLNDSGGARIQEGVESLAGYADIFLRNVLASGVVPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTVSGVAHRAFENDVEALLNLREFFNFLPLSNQDPAPVRECHDPSDRLVKSLDTIVPFESTKAYDMLDIIHAIVDERDFFEIMPNYAKNIVVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPIITFVDVPGFLPGTAQEYGGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYAWPTAEVAVMGAKGAVQIIFRGKENQAEAEAEYVDKFANPFPAAVRGFVDDIIEPATTRRKICSDLEVL 432          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A0S7KCB0_9TELE (PCCB n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KCB0_9TELE)

HSP 1 Score: 557 bits (1436), Expect = 3.170e-196
Identity = 274/371 (73.85%), Postives = 319/371 (85.98%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQD-LAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGV+SLAGYAD+F RNV ASGVVPQ+S+IMGPCAGGAVYSPA+TDF FMV+ TSY+F+TGPDVVK+VT E+VTQEELGGA+TH TVSGVAHRAFENDVEAL   REFF+FLPLSN++  PVRE  DP DR    L + +P +  + YDM ++I  +VD+ ++FEIMP+YA+NI VGFARM GRTVG+VGN P   +GCLDI SSVK ARFVRFCDAFN+PI+TFVDVPGFLPGT QE+ GIIR GAKLL+AYAEATVPK+TV+TRKAYGGAYDVMSSKHLRGD+NYAWPTAEVAVMGAKGAV+IIFRG++  A+AE +YVD F NP  AA RGF+DD+I+PA TRR +CSDLEVL
Sbjct:   73 GAPVIGLNDSGGARIQEGVESLAGYADIFLRNVLASGVVPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTVSGVAHRAFENDVEALLNLREFFNFLPLSNQDPAPVRECHDPSDRLVKSLDTIVPFESTKAYDMLDIIHAIVDERDFFEIMPNYAKNIVVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPIITFVDVPGFLPGTAQEYGGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYAWPTAEVAVMGAKGAVQIIFRGKENQAEAEAEYVDKFANPFPAAVRGFVDDIIEPATTRRKICSDLEVL 443          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: A0A5A8EFN3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFN3_CAFRO)

HSP 1 Score: 560 bits (1442), Expect = 9.330e-196
Identity = 277/370 (74.86%), Postives = 313/370 (84.59%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGVDSLAGYA+VFQRNVDASGVVPQL++IMGPCAGGAVYSPAMTDF FMVR TSYMFVTGPDVVKTVTQE VTQE LGGA+TH + SGV+H AF+NDVEALR  REF  FLP SN+   P  +  D   R    L   +P DPN PYDMK V+ +V+D+ N+FEIMPDYA+NI VGF RM+GRTVGVVGN P+ LAGCLDI SSVKAARFVRFCDAFN+P+LTFVDVPGFLPGT QEH GIIR GAKLL+AYAEA+VPK+TV+TRKAYGGAYDVMSSKHLRGD NYAWP+A++AVMGAKGAVEIIFRG+DL K E +Y + F NP+RAA RGF+D VI PAATRR++C DL +L
Sbjct:  165 GAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVDASGVVPQLTLIMGPCAGGAVYSPAMTDFTFMVRDTSYMFVTGPDVVKTVTQETVTQEVLGGAKTHTSKSGVSHLAFDNDVEALRGMREFVSFLPSSNRVPAPHVDPNDSATRSCDMLEGLVPTDPNVPYDMKVVVREVLDERNFFEIMPDYAKNIIVGFGRMDGRTVGVVGNQPMELAGCLDIDSSVKAARFVRFCDAFNIPLLTFVDVPGFLPGTGQEHGGIIRHGAKLLYAYAEASVPKLTVITRKAYGGAYDVMSSKHLRGDGNYAWPSAQIAVMGAKGAVEIIFRGKDLEKRELEYTEKFANPLRAAERGFVDAVISPAATRRVLCEDLAIL 534          
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Match: H3G8A8_PHYRM (Uncharacterized protein n=6 Tax=Oomycota TaxID=4762 RepID=H3G8A8_PHYRM)

HSP 1 Score: 557 bits (1436), Expect = 1.910e-195
Identity = 272/370 (73.51%), Postives = 314/370 (84.86%), Query Frame = 1
Query:    1 GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHCTVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVGLRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRTVGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGTDQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDMNYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFIDDVIDPAATRRLVCSDLEVL 1110
            G  V+G NDSGGARIQEGV SLAGYAD+FQ NV ASGVVPQL+++MGPCAGGAVYSPAMTDFIFM R +SYMFVTGPDVVKTVT EEVTQEELGGA TH   SGVAH AF+NDVEA+R  R FFDFLPL+NKE PPVR++ D R+R    L S +P DPN PY+MK++I ++VD  ++FEIMPDYA+NI VGF RMEGR VG+V N P+ LAGCLDI SSVK ARFVRFCD+FN+PI+T VDVPGFLPGTDQE+ GIIR GAKLL+AYAEATVPK+T++TRKAYGGAYDVMSSKHLRGD+NYAWP+AE+AVMGAKGAVEIIFRGQ++ +   DY   F NPM AA RGF+DD+I+P  TRR +C DL+VL
Sbjct:  125 GAPVIGLNDSGGARIQEGVASLAGYADIFQLNVLASGVVPQLTMVMGPCAGGAVYSPAMTDFIFMCRDSSYMFVTGPDVVKTVTNEEVTQEELGGAATHTKTSGVAHCAFDNDVEAIREMRRFFDFLPLNNKEKPPVRKSDDDRNRPVPTLESIVPPDPNVPYNMKDIIHQLVDSFDFFEIMPDYAKNILVGFGRMEGRVVGIVANQPMELAGCLDINSSVKGARFVRFCDSFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDVL 494          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9806.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY11_9PHAE6.250e-20676.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAR6_9STRA8.870e-20676.22Propionyl-CoA carboxylase beta chain mitochondrial... [more]
A0A7S3LK18_9STRA1.400e-19974.32Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A6V1TKP2_HETAK2.210e-19875.41Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RD78_9STRA3.510e-19774.32Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
UPI001E1D35CE4.630e-19772.70propionyl-CoA carboxylase beta chain, mitochondria... [more]
A0A0S7KBE4_9TELE2.150e-19673.85PCCB (Fragment) n=2 Tax=Poeciliopsis prolifica Tax... [more]
A0A0S7KCB0_9TELE3.170e-19673.85PCCB n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
A0A5A8EFN3_CAFRO9.330e-19674.86Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
H3G8A8_PHYRM1.910e-19573.51Uncharacterized protein n=6 Tax=Oomycota TaxID=476... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9806contigP-wetherbeei_contig9806:5..2467 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQL0
PFAMsCarboxyl_trans
Model size1110
Max annot lvl2759|Eukaryota
KEGG rclassRC00097,RC00367,RC00609,RC00942
KEGG koko:K01966,ko:K01969
KEGG ReactionR01859,R04138
KEGG Pathwayko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200
KEGG ModuleM00036,M00373,M00741
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.77e-212
EggNOG OGsCOG4799@1|root,KOG0540@2759|Eukaryota
EC2.1.3.15,6.4.1.3,6.4.1.4
DescriptionCoA carboxylase activity
Cds size1110
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9806.1.1prot_P-wetherbeei_contig9806.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9806 5..2467 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187111.4089258-CDS-P-wetherbeei_contig9806:4..1991683187111.4089258-CDS-P-wetherbeei_contig9806:4..199Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9806 5..199 +
1683187111.4192338-CDS-P-wetherbeei_contig9806:554..6201683187111.4192338-CDS-P-wetherbeei_contig9806:554..620Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9806 555..620 +
1683187111.427592-CDS-P-wetherbeei_contig9806:851..11031683187111.427592-CDS-P-wetherbeei_contig9806:851..1103Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9806 852..1103 +
1683187111.4358935-CDS-P-wetherbeei_contig9806:1384..16521683187111.4358935-CDS-P-wetherbeei_contig9806:1384..1652Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9806 1385..1652 +
1683187111.444013-CDS-P-wetherbeei_contig9806:1898..20921683187111.444013-CDS-P-wetherbeei_contig9806:1898..2092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9806 1899..2092 +
1683187111.4521759-CDS-P-wetherbeei_contig9806:2332..24671683187111.4521759-CDS-P-wetherbeei_contig9806:2332..2467Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9806 2333..2467 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9806.1.1

>prot_P-wetherbeei_contig9806.1.1 ID=prot_P-wetherbeei_contig9806.1.1|Name=mRNA_P-wetherbeei_contig9806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=370bp
GVSVVGGNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVIMGPCA
GGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEEVTQEELGGAETHC
TVSGVAHRAFENDVEALRATREFFDFLPLSNKEAPPVRETLDPRDREDVG
LRSFIPQDPNQPYDMKNVITKVVDDNNYFEIMPDYARNITVGFARMEGRT
VGVVGNNPLYLAGCLDIASSVKAARFVRFCDAFNVPILTFVDVPGFLPGT
DQEHNGIIRQGAKLLFAYAEATVPKVTVVTRKAYGGAYDVMSSKHLRGDM
NYAWPTAEVAVMGAKGAVEIIFRGQDLAKAEHDYVDTFCNPMRAAARGFI
DDVIDPAATRRLVCSDLEVL
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mRNA from alignment at P-wetherbeei_contig9806:5..2467+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9806.1.1 ID=mRNA_P-wetherbeei_contig9806.1.1|Name=mRNA_P-wetherbeei_contig9806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2463bp|location=Sequence derived from alignment at P-wetherbeei_contig9806:5..2467+ (Phaeothamnion wetherbeei SAG_119_79)
GGGGTGTCTGTCGTAGGGGGGAACGACTCGGGCGGCGCCCGCATCCAGGA AGGGGTGGATTCGCTGGCCGGCTACGCCGACGTGTTCCAGCGCAACGTGG ACGCGTCAGGCGTGGTACCACAGCTGAGCGTCATCATGGGGCCGTGCGCG GGCGGCGCCGTCTACTCGCCCGCCATGACTGACTTCATCTTCATGGTCAG TCGTCGTTTCTGATCTTTCTTTTCGTTGTCAGTTTAGATTCCTTGATTTT TGTCATTTTACCAGCCTTTCTGGATTTCCTTTTGGTGTTTGACTTGATTT GCGGTAGCGCCGCAGCCTGTGCCATAATTGATGAGTCGAGGCTTAGGATT TGTAGAGTTCTTATAGCCTTCCTTGTTTCTGATGGACCTTCTACGCTTCC TGCACGTATAGTTTCGTGGTTGTCTACTTGCTATGCTTCGAACAGTAAGA AGATGCCTCGCTCCCTTGAATTCGGCCTCAGAAGCTCAATTGTTCTCTCC TCGACTCGCCACGCCACCAATATCTCTTGCCCTGTCCCGACGCAATGCAG GTGAGACGAACGAGCTACATGTTCGTGACGGGGCCAGACGTCGTCAAGAC CGTGACGCAGGAAGAGGTGGGTAAGGGGGGCTTTGAGGGCTTTTCTGTTT CTGCGGCATTGGCTTTTAAAAGGGAGAAGGCGGGAACTGGAAAGAAGTGC CACTCAAGAACCCTGTCTTCTTCCAAGAGCATCTGAAGCCCTGCTTCAAA ACAACTGAGACCGCCTTTTCCGACTTTTAAAACCGGAACCGCAAGCCGAC AACCGCCACTTCCTCCGCCCGTAATACAAACATCAAAACCTGTGCAGGTG ACCCAAGAGGAGCTGGGGGGCGCCGAGACGCACTGCACCGTGTCGGGCGT CGCCCACCGCGCCTTCGAGAACGACGTGGAAGCCCTCCGTGCCACGCGCG AGTTCTTCGACTTTCTGCCGCTCTCCAACAAGGAAGCGCCGCCGGTGCGT GAGACGCTCGACCCGCGGGACCGCGAGGACGTCGGGCTGCGATCTTTCAT CCCGCAGGACCCCAACCAGCCCTACGACATGAAGAACGTCATCACCAAGG TGAGTAGTTCCGTGCTTTGGATTTCAAGGCGGGAGGGGTGTGAAAGCGGA TAAGTTTGTTTTCTTTGGTTTGCGTTTAGGCTTTGTGCGGGTTCACCTCC TTTCAGAAACGACTTTTCACCTGGGGTTTACAAACCTTTGCTTGCTTAGA TGTTATTCGCTTTTGGTTGGGTTTTAAGGTGACGGAAGTGCTGCCAAAAC TTCCTCTAGGGCTCATTGTCGCGCTTTCAACAGTAAACAAAGGTGAACCT AACCGGAAAAGCCGAAAATGCTACATGCAGGTGGTTGATGACAACAACTA TTTCGAGATCATGCCGGACTACGCACGCAACATCACCGTCGGTTTCGCCC GCATGGAGGGCCGCACCGTCGGGGTGGTCGGCAACAATCCGCTCTACCTG GCCGGCTGCCTCGATATCGCATCGAGCGTCAAGGCGGCGCGCTTCGTGCG CTTCTGCGACGCATTCAACGTGCCCATCCTGACGTTCGTGGACGTTCCCG GCTTTTTGCCGGGAACGGACCAGGAGCACAACGGCATAATCCGCCAGGGT GAGCGAAGGATGAGACACTTGGGTTCCCTTTTTCTGTATTCTGTCCTTCC ATCTCTCTTCATTGCATATTTCGGTCTCTGTCTGAGCAGCTTGGATTCGT AGTTGCGCCTCTGTTGATGCATGCCTCTTCTGCATTCGGCCGTTTACCTC TTTCTTTCGCTGCTTCTAATATTCCTTTCCGTTTTTTCCCGCCGCTTCTG CTCCCGCTTGCTGACTTGGCCTGCTGCACCAAAAACCCTACCAGGCGCCA AGCTGCTGTTCGCGTACGCCGAGGCGACAGTGCCCAAGGTGACGGTGGTG ACGCGCAAGGCGTATGGCGGCGCCTATGACGTCATGTCCTCCAAGCACCT GCGGGGCGACATGAACTACGCGTGGCCCACCGCCGAGGTCGCTGTCATGG GCGCCAAGGGTGCCGTAGAGATCATCTTCCGCGGACAGGTCAGCAGCGGG CCGTGCCGGTTTGGTGTTGGGGATTTGCGGTTTGTCGGTTTGGCGCAGTT GGTTGGGTTGGAGTTAGAGTTTGGAAGGAGAGGGTGGTTCAGGACAGCAG GCTTTTTGCATCACAGATTGAGAGGTGTGGTTCCGTCGCCGTCCTTACAC TTCTTATCTTGTCTCTTTCTCTTTTCCTCTTGCTTCTTCCTTCACTGTTC CTTCCCTTTCCCCTGTTTTCCCTGGCAGGACCTGGCGAAGGCGGAGCACG ACTACGTGGACACATTCTGCAACCCGATGCGGGCGGCGGCACGCGGCTTC ATCGACGACGTCATCGACCCGGCCGCCACGCGTCGCCTCGTCTGCTCCGA CCTCGAGGTGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9806:5..2467+

>mRNA_P-wetherbeei_contig9806.1.1 ID=mRNA_P-wetherbeei_contig9806.1.1|Name=mRNA_P-wetherbeei_contig9806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1110bp|location=Sequence derived from alignment at P-wetherbeei_contig9806:5..2467+ (Phaeothamnion wetherbeei SAG_119_79)
GGGGTGTCTGTCGTAGGGGGGAACGACTCGGGCGGCGCCCGCATCCAGGA
AGGGGTGGATTCGCTGGCCGGCTACGCCGACGTGTTCCAGCGCAACGTGG
ACGCGTCAGGCGTGGTACCACAGCTGAGCGTCATCATGGGGCCGTGCGCG
GGCGGCGCCGTCTACTCGCCCGCCATGACTGACTTCATCTTCATGGTGAG
ACGAACGAGCTACATGTTCGTGACGGGGCCAGACGTCGTCAAGACCGTGA
CGCAGGAAGAGGTGACCCAAGAGGAGCTGGGGGGCGCCGAGACGCACTGC
ACCGTGTCGGGCGTCGCCCACCGCGCCTTCGAGAACGACGTGGAAGCCCT
CCGTGCCACGCGCGAGTTCTTCGACTTTCTGCCGCTCTCCAACAAGGAAG
CGCCGCCGGTGCGTGAGACGCTCGACCCGCGGGACCGCGAGGACGTCGGG
CTGCGATCTTTCATCCCGCAGGACCCCAACCAGCCCTACGACATGAAGAA
CGTCATCACCAAGGTGGTTGATGACAACAACTATTTCGAGATCATGCCGG
ACTACGCACGCAACATCACCGTCGGTTTCGCCCGCATGGAGGGCCGCACC
GTCGGGGTGGTCGGCAACAATCCGCTCTACCTGGCCGGCTGCCTCGATAT
CGCATCGAGCGTCAAGGCGGCGCGCTTCGTGCGCTTCTGCGACGCATTCA
ACGTGCCCATCCTGACGTTCGTGGACGTTCCCGGCTTTTTGCCGGGAACG
GACCAGGAGCACAACGGCATAATCCGCCAGGGCGCCAAGCTGCTGTTCGC
GTACGCCGAGGCGACAGTGCCCAAGGTGACGGTGGTGACGCGCAAGGCGT
ATGGCGGCGCCTATGACGTCATGTCCTCCAAGCACCTGCGGGGCGACATG
AACTACGCGTGGCCCACCGCCGAGGTCGCTGTCATGGGCGCCAAGGGTGC
CGTAGAGATCATCTTCCGCGGACAGGACCTGGCGAAGGCGGAGCACGACT
ACGTGGACACATTCTGCAACCCGATGCGGGCGGCGGCACGCGGCTTCATC
GACGACGTCATCGACCCGGCCGCCACGCGTCGCCTCGTCTGCTCCGACCT
CGAGGTGCTG
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