mRNA_P-wetherbeei_contig9800.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9800.2.1
Unique NamemRNA_P-wetherbeei_contig9800.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A6J6CM82_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6CM82_9ZZZZ)

HSP 1 Score: 380 bits (975), Expect = 7.940e-131
Identity = 182/243 (74.90%), Postives = 212/243 (87.24%), Query Frame = 1
Query:    4 SGVIRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRL 732
            S ++R+ + A   GF V+++A +C+TV+LHRALSHRA++L  P  + FRF+ WITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGW+ VQM+NV LYRREA++P+T+ARYAKD+P TRADR FYD ALVGLAIG GVLVLVFG  +GLLAAF H+NLYL GSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSA+LSHRWFEIDPGWW++K+L    LA +RL + +L
Sbjct:    6 SPMVRLSLLAVLIGFAVSVVANLCTTVYLHRALSHRALTLKRPAAEVFRFLLWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWVTVQMKNVALYRREAKDPDTVARYAKDVPRTRADRWFYDRALVGLAIGTGVLVLVFGWQLGLLAAFAHLNLYLAGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSARLSHRWFEIDPGWWLVKLLVVTRLASLRLNERKL 248          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A7W0R1L2_9ACTN (Fatty acid desaturase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R1L2_9ACTN)

HSP 1 Score: 369 bits (946), Expect = 1.910e-126
Identity = 181/244 (74.18%), Postives = 206/244 (84.43%), Query Frame = 1
Query:   13 IRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQA 744
            + +++ A   G  V++IA + +T++LHR+LSHRA++L  PV + FRF+ WITTGIR RQWVAVHRKHHAFTDVEGDPHSPVL GW+KVQM NV +YRREA NPET+ARYAKDLP TR DR FYDHAL GLAIGV  LVL FG  +GLLA FVHVN+YLGGSAAVNAIGHHFGR+PY N AGNLQWLAF+TAGEGLHNNHHAAPTSAKL+HRWFEID GW++IKVL W  LAKVRL DLRLT  A
Sbjct:    2 LEIVLLALVVGAGVSLIANLATTIYLHRSLSHRALTLRRPVGEVFRFVIWITTGIRRRQWVAVHRKHHAFTDVEGDPHSPVLNGWIKVQMMNVAMYRREASNPETIARYAKDLPQTRVDRWFYDHALFGLAIGVLALVLAFGWQVGLLAGFVHVNIYLGGSAAVNAIGHHFGRQPYDNTAGNLQWLAFMTAGEGLHNNHHAAPTSAKLAHRWFEIDLGWYLIKVLLWCRLAKVRLADLRLTPAA 245          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: UPI000E340AE3 (fatty acid desaturase n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E340AE3)

HSP 1 Score: 358 bits (920), Expect = 9.150e-122
Identity = 175/245 (71.43%), Postives = 201/245 (82.04%), Query Frame = 1
Query:   16 RVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQAAA 750
            R ++ A   G  +++IA + +TV+LHRALSHRA++L  P   AFRF+ WI+TGIRPRQWVAVHRKHHAFTDVEGDPHSPVL GW+ VQM+N+ +YRREA NPET+ RYAKDLPA R DR+ YD ALVGL IGV +L LVFG  +GLLAAFVHVN+YLGGSAAVNAIGHHFGRRPY N AGNLQWLAFLTAGEGLHNNHHA PTSA+LSHRW+EIDPGWW+IK L+   LAKVR+        AAA
Sbjct:    2 RTVLVALVVGVGISLIANMATTVYLHRALSHRALTLRAPAAHAFRFVLWISTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLHGWVTVQMKNLVMYRREAHNPETIERYAKDLPADRLDRVLYDRALVGLGIGVALLCLVFGWQVGLLAAFVHVNMYLGGSAAVNAIGHHFGRRPYDNNAGNLQWLAFLTAGEGLHNNHHAKPTSARLSHRWYEIDPGWWLIKALTSMRLAKVRVMSGAANGFAAA 246          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A388NZF9_9ACTN (Delta-9 desaturase-like 2 protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A388NZF9_9ACTN)

HSP 1 Score: 352 bits (904), Expect = 4.220e-120
Identity = 169/245 (68.98%), Postives = 202/245 (82.45%), Query Frame = 1
Query:   10 VIRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQA 744
            V+++++ A   GF VT +A + +T++LHRAL+HRA++L P V    RF  W++TGIRPRQWVAVHRKHHAFTD EGDPHSPVLLGW  VQM+NV LYR  A +P+T+ RYAKDLP TR DRLF+D ALVGL +GV +LV+ FGP++GLLAAFVH+N YL GSAAVNAI HHFGRRPY NGAGNLQWLA LTAGEGLHNNHHAAPTSA+LSHRW+E+DPGWW+IK LS   LA+VRL  +RL + A
Sbjct:    4 VVKIIMLAVFVGFAVTTLANLGTTIYLHRALAHRALTLHPFVVFCARFTIWLSTGIRPRQWVAVHRKHHAFTDQEGDPHSPVLLGWKNVQMRNVVLYRSAANDPQTVERYAKDLPQTRLDRLFFDRALVGLGLGVALLVITFGPLVGLLAAFVHLNAYLAGSAAVNAIAHHFGRRPYANGAGNLQWLALLTAGEGLHNNHHAAPTSARLSHRWYELDPGWWLIKFLSSVRLARVRLATVRLKSSA 248          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A4V0X210_9ACTN (FA_desaturase domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4V0X210_9ACTN)

HSP 1 Score: 346 bits (888), Expect = 1.140e-117
Identity = 164/245 (66.94%), Postives = 201/245 (82.04%), Query Frame = 1
Query:   10 VIRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQA 744
            V+++++ +   GF VT IA + +T+++HRAL+H+A++L P VT A R   W++TGIRPRQWVAVHRKHHAFTD EGDPHSPVLLGW  VQ++NV LYR+ A +P T+ RYAKDLP TR D++F+D AL+GL +G+ +LV VFGP +GLLAAFVH+N YL GSAAVNAI HHFG+ PY NGAGNLQWLA LTAGEGLHNNHHAAPTSA+LSHRW+E+DPGWW+IKVLS   LAKVRL  +RL   A
Sbjct:    4 VVKLVLISIVVGFTVTTIANLGTTIYMHRALAHKALTLHPIVTFASRITIWLSTGIRPRQWVAVHRKHHAFTDQEGDPHSPVLLGWKNVQVRNVALYRKVANDPATVERYAKDLPQTRLDKIFFDRALLGLGLGIALLVFVFGPTVGLLAAFVHLNTYLAGSAAVNAIAHHFGKHPYANGAGNLQWLALLTAGEGLHNNHHAAPTSARLSHRWYELDPGWWLIKVLSTTRLAKVRLATVRLKNSA 248          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A6I3B9E1_9ACTN (Fatty acid desaturase n=2 Tax=root TaxID=1 RepID=A0A6I3B9E1_9ACTN)

HSP 1 Score: 344 bits (882), Expect = 9.350e-117
Identity = 165/245 (67.35%), Postives = 200/245 (81.63%), Query Frame = 1
Query:   10 VIRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQA 744
            V+++L+ A   GF VT +A + +TV++HRAL+H+A++L P      R   W++TGIRPRQWVAVHRKHHAFTD EGDPHSPVLLGW  VQM+NV LYR  A +P+T+ RYAKDLP TR D++F+D ALVGL +GV +LV VFGP++GLLAA VH+N+YL GSAAVNAI HHFGR+PY NGAGNLQWLA LTAGEGLHNNHHAAPTSA+LSHRW+E+DPGWW+I+VLS   LAKVRL  +RL   A
Sbjct:    4 VVKILLLAVLVGFSVTTLANLGTTVYMHRALAHKALTLHPLAVFCARLTIWLSTGIRPRQWVAVHRKHHAFTDQEGDPHSPVLLGWKNVQMRNVVLYRISANDPQTVERYAKDLPQTRLDKIFFDRALVGLGLGVALLVFVFGPMVGLLAAVVHLNVYLAGSAAVNAIAHHFGRKPYANGAGNLQWLALLTAGEGLHNNHHAAPTSARLSHRWYELDPGWWLIRVLSSVKLAKVRLATVRLKPSA 248          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A4V0X083_9ACTN (FA_desaturase domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4V0X083_9ACTN)

HSP 1 Score: 335 bits (859), Expect = 2.840e-113
Identity = 152/243 (62.55%), Postives = 197/243 (81.07%), Query Frame = 1
Query:    4 SGVIRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRL 732
            S ++R ++    AG +V  +A +C+TV+LHRALSHRA++L  P    FRF+ W++TGI+P++WVAVHRKHHAFTDVEGDPHSPVL GW  VQ++NV +YR+ A+NPET+A+YA+DLP  R DR F+ H   GL +G+  L++V GPV G++AA VH+N+YL GSAAVNA+GHHFGRRP+PN A NLQWLAF+T GEGLHNNHHAAP+S +LSHRW++IDPGWWVI+ L+   LAKVR +D+RL
Sbjct:    2 SEILRSIIIGSIAGLIVMALANICTTVYLHRALSHRALTLKKPAALVFRFVIWVSTGIKPKEWVAVHRKHHAFTDVEGDPHSPVLHGWKTVQIKNVAMYRKSAQNPETIAKYARDLPDDRWDRYFFGHNKTGLGLGIAFLIVVLGPVAGVVAALVHLNVYLAGSAAVNAMGHHFGRRPHPNQATNLQWLAFITMGEGLHNNHHAAPSSPRLSHRWYQIDPGWWVIRTLTTLRLAKVRFSDIRL 244          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A6I3HSS2_9ACTN (FA_desaturase domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3HSS2_9ACTN)

HSP 1 Score: 320 bits (819), Expect = 3.530e-107
Identity = 147/241 (61.00%), Postives = 186/241 (77.18%), Query Frame = 1
Query:   28 TAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQAAA 750
            TA A   VV   A  C+T++LHRALSHRA++L P     FR + W++TGI+P++WV+VHRKHHAFTD+ GDPHSPVLLGW  VQ +NV LYR   ++P+T++RYAKDLP  R D++F+ H   GL +G+ +L++  GP  GLLAAF+H N+YL G+AAVNA+GHHFGRRPY N A NLQWLAF T GEGLHNNHHAAP+S +LSHRWF+IDPGWW+IK+L+   LA +R  D+RLT  A A
Sbjct:   10 TAVAVAAVVNTAAMACTTIYLHRALSHRALALRPSAALVFRAILWLSTGIKPKEWVSVHRKHHAFTDIGGDPHSPVLLGWKTVQAKNVALYRATIKDPDTISRYAKDLPDDRWDKMFFGHNKTGLLLGIAILMVALGPWTGLLAAFIHANVYLAGNAAVNALGHHFGRRPYDNKATNLQWLAFFTMGEGLHNNHHAAPSSPRLSHRWFQIDPGWWIIKMLTILRLATLRFADIRLTPAAKA 250          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A6I2YSW9_9ACTN (FA_desaturase domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A6I2YSW9_9ACTN)

HSP 1 Score: 317 bits (811), Expect = 6.420e-106
Identity = 151/247 (61.13%), Postives = 193/247 (78.14%), Query Frame = 1
Query:    7 GVIRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQAA 747
            GV ++LV A   G  VT++A V +TV+LHRA +H+A+++ P     FR + W+ TGI+ R+WVAVHRKHHA+TD EGDPHSPVLLGW++VQ+ NV LYR+ A++PET+A+YAKD+P    DR   D +L+GL +G+ +L++  GP  GL+AAFVHVNLYL  SAAVN  GHHFGR+PYPNGAGN+QWLA+LTAGEGLHNNHHA P+SA+LSHR +E DPGWWVI  +    LAKVRLTD  + A+AA
Sbjct:    2 GVFKLLVLAPLVGLGVTLVANVLTTVYLHRAGAHKALTMRPEAAVVFRVLIWLMTGIKAREWVAVHRKHHAYTDEEGDPHSPVLLGWVRVQLTNVSLYRKSAKDPETVAKYAKDMPPDALDRYVLDKSLLGLGLGIAILMVSLGPWTGLIAAFVHVNLYLSTSAAVNGPGHHFGRKPYPNGAGNMQWLAWLTAGEGLHNNHHAVPSSARLSHRRWEFDPGWWVISSMKTIGLAKVRLTDAAVRAKAA 248          
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Match: A0A6L6DZ34_9ACTN (FA_desaturase domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6L6DZ34_9ACTN)

HSP 1 Score: 311 bits (798), Expect = 4.940e-104
Identity = 148/234 (63.25%), Postives = 180/234 (76.92%), Query Frame = 1
Query:   49 VVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFRFMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLYRREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIGLLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLHNNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQAAA 750
            VVT  A  C+TV+LHRALSHRA+++ P     FR + W++TGI+P++WVAVHRKHHAFTD++GDPHSPVLLGW KVQ  NV LYR    +P+T+ +YAKDLP    DR F+ H   GL +G+ +LV+  GPV GLLAAF+H N YL  +AAVNA+GH FGRRPY N A NLQWLAFLT GEGLHNNHHAAP+S +LSHRW +IDPGWWVI+ LS   LAK+R +D+RLT  A A
Sbjct:   17 VVTTAANTCTTVYLHRALSHRALTVHPLAAWFFRAVLWLSTGIKPKEWVAVHRKHHAFTDIDGDPHSPVLLGWKKVQKNNVALYRAALADPDTMNKYAKDLPDDAWDRAFFGHNKTGLLLGIAILVVTLGPVTGLLAAFIHANAYLAVNAAVNAMGHRFGRRPYANKATNLQWLAFLTMGEGLHNNHHAAPSSPRLSHRWHQIDPGWWVIRSLSLLGLAKLRFSDIRLTPTAKA 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9800.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J6CM82_9ZZZZ7.940e-13174.90Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A7W0R1L2_9ACTN1.910e-12674.18Fatty acid desaturase n=1 Tax=Acidimicrobiia bacte... [more]
UPI000E340AE39.150e-12271.43fatty acid desaturase n=1 Tax=Desertimonas flava T... [more]
A0A388NZF9_9ACTN4.220e-12068.98Delta-9 desaturase-like 2 protein n=1 Tax=Acidimic... [more]
A0A4V0X210_9ACTN1.140e-11766.94FA_desaturase domain-containing protein n=1 Tax=Ac... [more]
A0A6I3B9E1_9ACTN9.350e-11767.35Fatty acid desaturase n=2 Tax=root TaxID=1 RepID=A... [more]
A0A4V0X083_9ACTN2.840e-11362.55FA_desaturase domain-containing protein n=1 Tax=Ac... [more]
A0A6I3HSS2_9ACTN3.530e-10761.00FA_desaturase domain-containing protein n=2 Tax=ro... [more]
A0A6I2YSW9_9ACTN6.420e-10661.13FA_desaturase domain-containing protein n=4 Tax=ro... [more]
A0A6L6DZ34_9ACTN4.940e-10463.25FA_desaturase domain-containing protein n=2 Tax=ro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9800contigP-wetherbeei_contig9800:1408..2232 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1121877.JQKF01000007_gene981
Preferred namedesC
PFAMsFA_desaturase
Model size825
Max annot lvl201174|Actinobacteria
KEGG rclassRC00917
KEGG koko:K00507
KEGG ReactionR02222
KEGG Pathwayko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212
Hectar predicted targeting categorychloroplast
Exons1
Evalue1.88e-74
EggNOG OGsCOG1398@1|root,COG1398@2|Bacteria,2GJJF@201174|Actinobacteria
EC1.14.19.1
DescriptionPFAM Fatty acid desaturase
Cds size825
COG categoryI
BRITEko00000,ko00001,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187111.2785072-CDS-P-wetherbeei_contig9800:1407..22321683187111.2785072-CDS-P-wetherbeei_contig9800:1407..2232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9800 1408..2232 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9800.2.1prot_P-wetherbeei_contig9800.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9800 1408..2232 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9800.2.1

>prot_P-wetherbeei_contig9800.2.1 ID=prot_P-wetherbeei_contig9800.2.1|Name=mRNA_P-wetherbeei_contig9800.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
VSGVIRVLVTAFAAGFVVTMIAQVCSTVFLHRALSHRAVSLSPPVTQAFR
FMQWITTGIRPRQWVAVHRKHHAFTDVEGDPHSPVLLGWMKVQMQNVRLY
RREARNPETLARYAKDLPATRADRLFYDHALVGLAIGVGVLVLVFGPVIG
LLAAFVHVNLYLGGSAAVNAIGHHFGRRPYPNGAGNLQWLAFLTAGEGLH
NNHHAAPTSAKLSHRWFEIDPGWWVIKVLSWFHLAKVRLTDLRLTAQAAA
AQAASKAQAAATAATAPRRKAVSG*
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mRNA from alignment at P-wetherbeei_contig9800:1408..2232-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9800.2.1 ID=mRNA_P-wetherbeei_contig9800.2.1|Name=mRNA_P-wetherbeei_contig9800.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig9800:1408..2232- (Phaeothamnion wetherbeei SAG_119_79)
GTGTCGGGCGTGATTCGTGTGCTCGTCACCGCGTTCGCGGCCGGATTCGT CGTCACCATGATCGCCCAGGTCTGCAGCACCGTGTTCCTGCACCGGGCGC TCTCCCACCGTGCCGTGTCGCTGTCGCCGCCGGTCACCCAGGCCTTCCGC TTCATGCAGTGGATCACCACCGGGATCCGCCCCCGCCAGTGGGTGGCAGT GCACCGCAAGCACCACGCGTTCACCGATGTGGAGGGCGACCCGCACTCCC CCGTCCTGCTCGGTTGGATGAAGGTGCAGATGCAGAACGTGCGCCTCTAC CGGCGCGAGGCTCGCAACCCCGAGACCTTGGCCCGCTACGCCAAGGACCT CCCGGCCACGCGCGCCGACCGGCTGTTCTACGACCACGCACTGGTCGGCC TGGCCATCGGCGTGGGCGTGCTGGTGCTGGTGTTCGGTCCGGTGATCGGG CTGCTCGCGGCATTCGTGCACGTCAACCTGTACCTCGGCGGCAGCGCCGC AGTGAACGCGATCGGCCACCACTTCGGCCGTCGCCCGTACCCGAACGGCG CCGGCAACCTGCAGTGGCTGGCGTTCCTCACCGCGGGCGAGGGGCTGCAC AACAACCACCACGCCGCGCCGACGTCGGCGAAGCTGTCACACCGCTGGTT CGAGATCGATCCGGGCTGGTGGGTGATCAAGGTCCTCAGCTGGTTCCACC TGGCCAAGGTGCGGCTCACCGACCTGCGCCTCACAGCGCAAGCCGCCGCT GCGCAAGCGGCGTCGAAGGCACAGGCCGCGGCGACGGCAGCGACTGCCCC CCGCCGCAAGGCCGTGTCCGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9800:1408..2232-

>mRNA_P-wetherbeei_contig9800.2.1 ID=mRNA_P-wetherbeei_contig9800.2.1|Name=mRNA_P-wetherbeei_contig9800.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig9800:1408..2232- (Phaeothamnion wetherbeei SAG_119_79)
GTGTCGGGCGTGATTCGTGTGCTCGTCACCGCGTTCGCGGCCGGATTCGT
CGTCACCATGATCGCCCAGGTCTGCAGCACCGTGTTCCTGCACCGGGCGC
TCTCCCACCGTGCCGTGTCGCTGTCGCCGCCGGTCACCCAGGCCTTCCGC
TTCATGCAGTGGATCACCACCGGGATCCGCCCCCGCCAGTGGGTGGCAGT
GCACCGCAAGCACCACGCGTTCACCGATGTGGAGGGCGACCCGCACTCCC
CCGTCCTGCTCGGTTGGATGAAGGTGCAGATGCAGAACGTGCGCCTCTAC
CGGCGCGAGGCTCGCAACCCCGAGACCTTGGCCCGCTACGCCAAGGACCT
CCCGGCCACGCGCGCCGACCGGCTGTTCTACGACCACGCACTGGTCGGCC
TGGCCATCGGCGTGGGCGTGCTGGTGCTGGTGTTCGGTCCGGTGATCGGG
CTGCTCGCGGCATTCGTGCACGTCAACCTGTACCTCGGCGGCAGCGCCGC
AGTGAACGCGATCGGCCACCACTTCGGCCGTCGCCCGTACCCGAACGGCG
CCGGCAACCTGCAGTGGCTGGCGTTCCTCACCGCGGGCGAGGGGCTGCAC
AACAACCACCACGCCGCGCCGACGTCGGCGAAGCTGTCACACCGCTGGTT
CGAGATCGATCCGGGCTGGTGGGTGATCAAGGTCCTCAGCTGGTTCCACC
TGGCCAAGGTGCGGCTCACCGACCTGCGCCTCACAGCGCAAGCCGCCGCT
GCGCAAGCGGCGTCGAAGGCACAGGCCGCGGCGACGGCAGCGACTGCCCC
CCGCCGCAAGGCCGTGTCCGGCTGA
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