mRNA_P-wetherbeei_contig978.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig978.2.1
Unique NamemRNA_P-wetherbeei_contig978.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: D7FJM9_ECTSI (Utp12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM9_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 2.660e-112
Identity = 255/663 (38.46%), Postives = 360/663 (54.30%), Query Frame = 3
Query:    9 TSSELTVFDP-SKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRPQGRKRSSSGQPK-ALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADA--SAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDL----VTALVGCDSGTLSVLQVRREA--AGGVVHKPQECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIAPKFATVGFLDPANGALLAEARVEGAAAAATANDAAKKMRVKGADTTPEAGHVTGPGEMGLRGTEVDLGAANAADADE------------DAGRAAATAGGDAGDDSAAAALADERSLPLGERLEALSRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAAKAEEVSAE-----PENVYNE 1916
            +S +L +FDP S EL A VS+DNRLR+W+  SG LRQQYVE ++  ++YTC+ WHR   +  KR SSG  K +  LG+IALGT++G+V++WDL+RG ++ SLGEG   P +T+  F              +   +LF+AS+   V+EW+V  G + RKL+G KHGAT +CLHP GK LA+A +++R+L+L T K  R   +GHA +V  + FS  GRYLA++A  +RF  ++D A ++   S  + T      P ++ L   +S+             GG GD+    VT + G D+G +SV++ RR+    GG V K  + R  + G  +  A L   R         +L+A GS  +P F    F D A G+LL+ + V  A   A   +  +    KG        HV GPGE+G+RG E D  A   A  DE             A +     GG+           +E  + + +RLE      +  + Q                     P  ES++TVL QALQS D++LLEQCL++ D  V+EATV++LPS  VL FL RVV+K EKRP RA  L  WIRA+L+ H GYL+SVPGL  +LA L Q++  R+ASFPK + L GRLDL+LA     +   + +       PE+VY E
Sbjct:    8 SSGQLCIFDPASGELYASVSSDNRLRIWNTASGDLRQQYVEPRHLAKQYTCIAWHRRSSKKSKRGSSGASKPSSSLGMIALGTDKGSVSVWDLKRGALAYSLGEGEGFPSVTSGGFS-------------ADGSSLFSASSGKEVVEWNVETGTVARKLKGFKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFANVFDVAASEVPPSEPVCTLGFAATPAFLSLHAASSS-------------GGGGDVSTDQVTVVAGFDTGGVSVMRTRRQTDGKGGAVSK-LDIRGAAGGPSSSPAALHG-RLSSERPSSAILLATGSAASPGFVEASFEDEA-GSLLSSSSVATAGGHADGEEDEEGTGDKGGPA-----HVVGPGELGIRGVEKDSVAGEGARGDEMEXXXXXXXXDSRAPKRLKAGGGE-----------EEAGMTIADRLEXXXXGGEGGAVQ---------------------PRAESLSTVLTQALQSGDESLLEQCLDVVDQGVIEATVERLPSSKVLQFLLRVVAKLEKRPNRAASLGRWIRALLSCHLGYLVSVPGLPDKLALLHQLIDRRVASFPKLIQLHGRLDLLLARAKAESSRRDAAGARAMDTPESVYRE 604          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A7R9U6H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6H1_9STRA)

HSP 1 Score: 243 bits (619), Expect = 3.670e-67
Identity = 204/622 (32.80%), Postives = 305/622 (49.04%), Query Frame = 3
Query:   21 LTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRPQGRKRSSSGQPKALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAGGVVHKPQECRVVSAGVKAGGAPLEVVRAC-FALSGDE---LLVAHGSPIAPKFATVGFLDPANGALLAEARVEGAAAAATANDAAKKMRVKGADTTPEAGHVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEALSRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAAK 1874
            L +FD +   LA++SAD+R+R+WDA  G LR    E ++F ++Y+C  W RP             K   LGL+A G+  GT ++WDLQRGVV  + GE     ++TA+AF                   L TAS +  +  + V  GQL++ L GLK G +++C+HP    + V G ++R+++L + K++R+  +G A  V+A+  S  GRYL  AAE SR V ++D +      A+AT++L D P  + L   A               G    +  A     S       +  +  GG   +       S+   A GA    VRA  F    D+   L++A GS  AP F  V F D A G LL +     +  A   ++ A + R K      E  HV    + G RG E +      A AD    ++A                  E    LGERL+ L   L Q SA    Q++ ++   TAA         ES+ +VL QAL+SSD  L+E CL   D  V++AT+ +L + LVLPFLQ VV++ E+RPAR   L  W++AV+T HT Y++SVP +  +LA + Q++  R  +    + ++GRLDL+L+    +A+
Sbjct:    5 LRIFDGNARNLAVLSADSRIRVWDAVRGKLRFALAEKEHFLKQYSCTAWFRP------------AKGTKLGLLACGSRSGTSSVWDLQRGVVVSTCGEAGQ--EVTAVAFA-------------KNGTQLLTASREKEICVYDVKSGQLLQTLAGLKSGGSAMCIHPHQDAVVVGGVNIRVVSLESGKKIRSLVAGQASRVSALVLSSNGRYLGVAAEASRDVSVFDLSR-KGKEALATFSLGDVPDSIALATLAPP-------------GKEESVFVAATTSTSKCFLCQVIPAQGDGGPSQRVVLLGSSSSPRGATGADAAAVRAASFEQVADDRVRLVLALGSLEAPVFEEVSFYD-AEGKLLDQCT---STTALNGSNDAPRPRAKNQQANGEY-HVVAASQQGKRGREQEASEKEVA-ADPKRQKSA------------------EPEPTLGERLKVLREELAQRSASENEQQRRKQ---TAAE--------ESLQSVLTQALKSSDRKLVELCLQTTDSGVIDATIKRLSASLVLPFLQEVVNRLERRPARLPELCPWLQAVMTHHTSYVLSVPAVHEKLAVVHQVLEERTRTLHSLMSISGRLDLILSQARASAE 550          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A5D6XKP2_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKP2_9STRA)

HSP 1 Score: 246 bits (628), Expect = 4.700e-66
Identity = 212/632 (33.54%), Postives = 308/632 (48.73%), Query Frame = 3
Query:    9 TSSELTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRPQGRK--RSSSGQPKALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAGGVVHKP----QECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIAPKFATVGFLDPANGAL--LAEARVEGAAAAATANDAAKKMRVKGADTTPEAGHVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEAL-SRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAAKA 1877
            T + L +F PS+E  A VS DNRLR+WD +SG+L+    E  +   +YTC+ W    P  +K  + +     A PLGL+ALGT  G V +WDLQ+G V ++L            A G AV       A  S    L+++S++ HVLEW+V DG + RK R    GA  L +    + LAV G+++R  +LA+ K+ R   +G + +V+ + FS C R+L ++  G RFV +YD A  ++      +++   PV +  R  A                   D++ A V   SG+L V   ++  +G    KP     +  V  +G  A    L V  +  A +  ELLV  GS + P F  V  +D        LA A +      A A  A+KK+++       E   V    E G     +D+  A+A                  G +  AA  AD+  L L ER+EAL  RV +  +A+  R     +A E AA  G K P   S+++VL+QALQS D+A+LE CL   D   +  T+ ++ +V VL  L+ +V KFEK P R   L  WIR++L  HT YLM+ P L   L+ L Q++  RL    +   LAGRL LV+  V  AA A
Sbjct:  341 TETMLQLFAPSQEYFAAVSEDNRLRVWDVSSGALQHDLRERDHLSYKYTCITWTLSSPLLKKSAKRAKASGSAAPLGLVALGTSAGAVVVWDLQKGEVVQTLASDKDKD-----AHGAAVTD----VAFNSQGSLLYSSSSEKHVLEWNVKDGAVTRKFR--TDGAHKLAVSANDEVLAVGGSAIRTFDLASGKKARKLVAGLSSSVSQLLFSACARFLFSSTVGGRFVNMYDLAATESDEPAVNFSMPSAPVALVARADAGRKKST-------------DVLLAAV-ATSGSLFVW-TQKYKSGAKSTKPVAPDSKSVVADSGASASAGVLAVQAS--AETKTELLVVRGSLLKPVFERVSIVDEQRQLKPELAFAAISEHLLLAGAETASKKLKLAAEAAEKETARVPTLAERGGLAKALDVVDASA------------------GFEDLAADGADDNDLTLAERVEALRERVENDLAAELVRA----DASELAAQGGEK-PDASSLSSVLEQALQSKDNAMLEYCLRTRDAKTIGNTIKRVSAVKVLELLEILVLKFEKSPGRCARLCPWIRSILLHHTAYLMTQPDLVQSLSALYQILENRLKVHDQLQKLAGRLSLVIGQVHEAAAA 921          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A4D9D9A1_9STRA (Utp12 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A1_9STRA)

HSP 1 Score: 233 bits (593), Expect = 3.760e-63
Identity = 204/648 (31.48%), Postives = 303/648 (46.76%), Query Frame = 3
Query:   45 ELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRPQGRKRSSS-GQPKALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASA-DTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKW-LAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAGGVVHKPQECRVVSAGVKAGG-------APLEVVRACFALSGDE------------------------LLVAHGSPIAPKFATVGFLD-PANGALLAEARVEGAAAAAT--------ANDAAKKMRVKGADTTPEAGHVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEALSRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHV 1859
            ELL  V+ DNR+R++ A +G+LRQ+Y+E  +F  +YTC+ W +      K  +      +  +GL+ALGT++G V++WDL RGV+++ LGEG SL + T +AF              +    L+T++A D  VLEWS+  G+  R+L G KHGA++L + P G   LAVA   + +++L + +R +   SGHA AV  M FS  G +LA A+ GSR + ++ C   +  A I T  L   P ++ LR   S                   ++T L  CD+G++ +L+    AA    H P  C    +G  AG        AP   +R      G E                        + +A+G+  AP F +           LL    +EG+   +         A++  K+  VK  +    A   T   E G+ G     G             A     GD  DD             +G RL+ ++  L Q              +  A + G K    +S+ TVL QAL+S D+ LLEQCL + D  ++  TV  L + LV PF+  +V K EKRP RAV L  WIR VL  HT YL+  PGL  +LA L ++ + R+   P+ L L+GRL+L+LA +
Sbjct:    9 ELLVHVATDNRIRVYSAAAGTLRQKYIEKDHFAFQYTCLAWMQGLAWNDKNLTKVAHNPSNAMGLLALGTDRGCVSVWDLTRGVLARRLGEGQSLKRFTGMAFS-------------ADGSRLYTSNAGDEDVLEWSLGTGECRRRLIGDKHGASALVVGPAGSAILAVARTRIHLIDLVSGERRKKISSGHAAAVTHMAFSEDGHFLATASVGSRHINIFSCQGKNKEAVITT-ALDGCPTWLALRADPSGREKGAV------------VLTLLACCDTGSVRLLRQSWAAA----HAPP-CDSAGSGEDAGALARAGTRAPPTTLRVFTVTDGKESENVSALAACFLPWAGRKGSIAWRVGLAYGAESAPVFTSFSIASGEETDELLPRVLLEGSRLTSEKAKQEDGLASNKRKRREVKAVEMQDPASKRTALDEHGISGLNHAAGVG-----------AMIEMRGDTEDDDT-----------MGRRLQKMAEGLSQGLEGHGALVAAGPVETAAKSVGFK---ADSLFTVLSQALKSGDEELLEQCLAVQDTQILSKTVRLLTAPLVFPFINTLVRKLEKRPNRAVSLCPWIRFVLLHHTSYLIGTPGLDQRLAGLHKVATRRVTVLPRLLGLSGRLELMLAQI 600          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A2D4BWN2_PYTIN (Utp12 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWN2_PYTIN)

HSP 1 Score: 228 bits (582), Expect = 7.740e-62
Identity = 208/627 (33.17%), Postives = 287/627 (45.77%), Query Frame = 3
Query:   21 LTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRPQGRKRSSSGQPKALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRRE---AAGGVVHKPQECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIAPKFATVGFLDPANG--ALLAEARVEGAAAAATANDAAKKMRVKGADTTPEAGHV-TGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEAL-SRVLDQASAQRQRQRQPREAQETAAAAG---RKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAA 1871
            + V   + E  A VS DNRL++WD +SG++     E  +   +YTC+ W +  P    ++ S + KA   GLIALGT  G + IWDLQRG V + L      P+   L                     L++ S D HVLEW+V DG + R+ R    GA  + + P  + LA+ G ++R  +L++ K+ R   +G + AV  +CFSPC RYL +A  G RFV +YD A AD          +D PV      ++SA                 D++   V   +G+L V  VR +   AA      P    VV     + G  L  +         +LLV  GS   P F T   LD      A L  A +           A KK +V       E  HV T     GL   +  + A  A D +ED             DD      ADE +  L ER+EAL  RV  + +A+  R     +A+ T  AAG    + P   S++T+L QALQS D+A+LE CL   D  V+  T+ ++ SV VL  L  +V KFEK P R   L  WIRA+L  HT YLM+ P L   L+ L Q++  RL        LAGRL LV+  +  A+
Sbjct:    1 MQVLSATHEYFAAVSEDNRLKVWDVSSGAIEHDLKERDHLKYKYTCIAWTQTSPL--LKAGSKRAKASGQGLIALGTSTGAIVIWDLQRGEVVQRLASEKEGPRRGHL---------------------LYSCSNDKHVLEWNVQDGSIARRFRCGSEGAQKVTVSPQDEILAIGGTTIRTYDLSSGKKARKLVAGLSSAVNQLCFSPCKRYLFSATVGGRFVNMYDLAHAD----------KDEPVLNFAMPSSSASLLVHTKSGKKKT----DVLLGAVST-TGSLFVWSVRHKPGSAARAQPLTPDAKSVVGDKDHSAGVXLAALATESDAQPSQLLVVRGSTAKPVFETTALLDDQQQLRAELEFAAISEHLLLGDKTSAQKKQKVLADAAEQEKTHVPTLAHRSGLAAAKAVVDATAAGDDNED-------------DD------ADEPT--LAERVEALRERVESELAAEMARV----DAEATGDAAGPARSERPDASSLSTLLDQALQSKDNAMLEYCLRTRDAKVIANTIKRVSSVKVLELLDILVLKFEKSPGRCGRLCPWIRAILLHHTAYLMTQPDLVQSLSALYQVLENRLKVHDALQRLAGRLSLVIGQIHEAS 564          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A485LGV1_9STRA (Aste57867_21150 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGV1_9STRA)

HSP 1 Score: 226 bits (575), Expect = 5.050e-61
Identity = 202/641 (31.51%), Postives = 300/641 (46.80%), Query Frame = 3
Query:   18 ELTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPR-----PQGRKRSSSGQPKALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAGGVVHKPQECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIAPKFATVGFLDPANGALLAEARVEGAAAAATANDAAKKMRVKGADTTPEAGHVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEALSRVLDQASAQRQRQRQPR---EAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAAKAEEVSAEPENVYNE 1916
            +L  F P +     +S DNR+++WD  +GSLRQ+  E  +   +YT + W +        +G KR++SG+     LG++ALGT  G + +W+L++G V++ L    S     A    I  A         S+  TLF+AS + +VLEW+V DG + RK +    GA+ L L      LAV  + +++ ++A+ K+ +   SGH+ ++A + FS CGRYL +A    RFV ++D A ADA A +  ++     V +  RV  +            VA  NG L+    G  + T  +L V +     VV         S                       L+VA GS   P F TV  L   +GA++A   +     +AT   A KK +   +  TP            L  T V+ G A A+        A ATA GD                 L ER+EAL   +D                   +T  A  +   T  S+ +VL+QALQS D+ALLE CL + DP V++ T  +L +  V PFL  +V KFEKRP R   +  WI+ ++  HT YLM+VP +  +L+ L Q +  R+  FP+   L+GRL+LVL  +   +  E V   P+ VYNE
Sbjct:    8 KLAAFSPCQSFFISISDDNRVKIWDVAAGSLRQELKERDHLNYKYTSLAWTKTSVWSSGKKGNKRAASGE-----LGMLALGTTTGAIVVWNLEKGEVAQRLSRDNSENGHAAAVTDIVFA---------SSGATLFSASTEKNVLEWNVKDGSVARKFKVGAEGASKLALSASDDVLAVGSSHIKLFDVASGKKSKKLTSGHSTSIATLFFSACGRYLFSATH-ERFVNVFDVA-ADADAPLYNFSADSSVVSVVGRVAVAKKAKHSTATVAAVAD-NGALLVWQHGLAASTKPILPVTKFTDASVVLSAFSVEHAS---------------------SALVVARGSIHNPHFETV--LYEKDGAIVAAHALAALDTSATVL-ATKKAKTTDSSKTPA-----------LVPTLVERGTAKAST------MADATAEGDXXX------XXXXXEATLEERIEALRDEIDAGDXXXXXXXXXXLTTTTHKTTRAKAQASST--SLVSVLEQALQSKDNALLENCLRVHDPKVIDETCRRLNTTRVFPFLLLLVEKFEKRPTRGATMCQWIKYLMLNHTAYLMTVPDVIEKLSTLYQSLDARVKVFPQLHKLSGRLNLVLGQIAGRSNVEVVDDAPQVVYNE 582          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: W4H0X9_9STRA (Utp12 domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0X9_9STRA)

HSP 1 Score: 217 bits (553), Expect = 7.810e-58
Identity = 200/655 (30.53%), Postives = 303/655 (46.26%), Query Frame = 3
Query:   15 SELTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRPQGRKRSSSGQP-----KALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAGGVVHKPQECRVVSAGVKAGG----APLEVVRACFALSG-DELLVAHGSPIAPKFATVGFLDPANGALLAEARVEGAAAAATANDAAKKMRV-KGADTTPEAG--HVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEALSRVLD-----QASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAAKAEEVSAEPENVYNESDD 1925
            ++L  F P +     +S DNR+++WD  SGSLRQ+  E  +   +YT + W +  P     SSS +          LG++ALGT  G + +W+L++G V   L    S     A    I  A         S+  TLF++S + +VLEW+V D  + RK +    GA+ L L      LAV  +S+++ ++A+ K+ +   SGHA AV+ + FS C RYL ++  G RF+ ++D +                P+Y     T+ A                  LVT ++       SV  V   A  G V   Q    +S+          A   V  A F++   + ++VA GS   P F TV F    +GA+++ A V  +A   ++   AKK +V K A+   + G  HV    E G   T   + A   A  DE               +       D+    L +RL+ L   +D     +  A      +P       A A     +  S+ +VL+QALQS D+ALLE CL + DP V++ T  +L +  V PFL  +V KFEKRP R   +  WI+ ++  HT YLM+VP +  +L+ L Q +  R+  FP+   L+GRL+LVL  +   +  E V   P+ VYNE+DD
Sbjct:    8 AKLAAFSPCQSFFVSISDDNRVKVWDVASGSLRQELKERDHLTYKYTSLAWTKASPWAASSSSSSKKGTKRSATSDLGVLALGTTTGAIVVWNLEKGEVGVRLARETSENGHAAAVTDIVFA---------SSGATLFSSSNEKNVLEWNVKDASVTRKFKVGSDGASKLALSKSDDVLAVGSSSIKLFDVASGKKSKKLTSGHATAVSQLAFSDCARYLFSST-GERFINVFDVSAESTD-----------PLYNFAADTSLAT-----------------LVTRVLVAKKAKHSVATVASVADNGSVFVWQHAMTLSSKPVLAATQITASAAVQLAAFSVDNTNAVIVARGSIHKPHFETVAF--EKDGAIVS-AHVTLSALDTSSLLVAKKSKVEKNAEDVAKKGDAHVPTLVERGTAKTSTMVDATAGAVVDEA--------------EETXXXXXDDEEATLEDRLQLLRDDIDDNEDIEDDALTTVTPRPHTLSRAKAQA-----SSTSLVSVLEQALQSKDNALLEHCLRIHDPKVIDETCRRLNTTRVFPFLLLLVEKFEKRPTRGATMCQWIKFLMLNHTAYLMTVPDVIDKLSTLYQSLDARVKVFPQLHKLSGRLNLVLGQIAGRSNVEVVDDAPDVVYNEADD 602          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A067BZW6_SAPPC (Utp12 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZW6_SAPPC)

HSP 1 Score: 217 bits (552), Expect = 8.010e-58
Identity = 198/656 (30.18%), Postives = 302/656 (46.04%), Query Frame = 3
Query:   21 LTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRPQGRKRSSSGQPKALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAGGVVHKP--QECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIAPKFATVGFLDPANGALLAEARVEGAAAAATANDAAKKMRVKGADTTPEAG-----HVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADE----------RSLPLGERLEALSRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAAKAEEVSAEPENVYNESDDMGSE 1937
            L+ F P +     VS DNR++LWDA SG+LR +  E  +   +YTC+ W    P       + +  A  LG+IALGT  G + +W+L++G      G G ++   T + F              S   +LF+++A+ +V EW+V D ++VRK++    GAT L L      LAV  +S+++ ++ + K+ +    GHA AV  + FS CGRYL +++   RFV ++D A +D+   +  ++    PV++  RVT +             A  +  +V A    ++G + V      AA     KP     +V+S+ V        +V +  + +   ++VA G+ I P F TV  +D A+GA   +  ++    A        +   K A TT E       HV    E G   T   + +    +ADED     AT G          ALADE              L ++  + SRV  QAS+                          S+ +VL+QALQS D+ LLE CL + D  V++ T  +L    V PF+  +V K EKRP R   +  WI+ +L  HT YLM+VP +  +L+ L Q +  RL  FP+   L GRL+LVL  +   A A  V   P   Y E D+   E
Sbjct:    9 LSAFSPCQASFVTVSDDNRVKLWDAASGALRSELKERDHLSYKYTCLAWSSTSPWAASGKKAKRSAAGDLGIIALGTSTGAIIVWNLEKG--ENDHGHGSAV---TDIVFS-------------STGTSLFSSAAEKYVFEWNVKDAKMVRKIKVGSDGATKLALSSNDDVLAVGASSIKLFDVVSGKKSKRLTFGHASAVTQLFFSACGRYLFSSS-AERFVNVFD-ATSDSEDPLYNFSCDSTPVHVHGRVTVAKK-----------AKNSTAIVVATT--EAGAVFVWTHAMTAA----SKPIAAVAKVLSSAV--------LVASLTSATETSVIVARGAAIKPHFETVALVD-ADGAFRGDITLD----ALDNTGLLLEKPSKKAKTTDETEVVAKTHVPSLLERGSAKTSTAIDSTVEHNADEDXXXXEATLG------ERVQALADELXXXXXXXXXXDTVLTDQYRSTSRVKAQASST-------------------------SLVSVLEQALQSKDNVLLENCLRVHDLKVIDETCRRLSPTKVFPFVLLLVEKLEKRPTRGATMCVWIKYLLLNHTAYLMTVPDVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIAGRANAIAVDETPLVTYREDDEDAGE 583          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A7S2MLY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MLY1_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.980e-57
Identity = 182/567 (32.10%), Postives = 275/567 (48.50%), Query Frame = 3
Query:  234 LIALGTEQGTVTIWDLQRGVVSKSLGEGM-SLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGS-RFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAGGVVHKPQECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIAPKFATVGFLDPANGALLAEARVEGAAAAATANDAAKKMRVKGADTTPEAG--HVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEALSRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHV--GPAAKAEEVSAEPENVYNE 1916
            ++A+GT+ G +++WDL+RGVV   LGE   ++  +  L F              S   +L++ S++  + +W V  G++VR+ +G KHG   +        LAV  ++VR+++L T KR+R F +GHA  V  M FS  G+YLA A EG  RFV ++D  +A   AAI + ++   P  + L +                 G       +L  C   ++SV++   EA             +    K G       R         L VA G   AP F TV + +   G L     +E            ++ + K +  TPE G  HV G G++G+   E+D   A A                     S  A   D+  L LGERLEALS+ L          + P E ++ A       P  +S ATVL QALQSSDD+LLEQCL + D  V+E ++D+L    VLP + ++  K E+ P R   L  W+RA++T+HT YLMS+P L ++L+ L Q ++ R++ FPK L L+GRL+L LA+V       AE+ ++ P+ VY++
Sbjct:    1 MVAVGTDSGHISVWDLERGVVVVKLGENQKNMAAVKDLDFS-------------SDGKSLYSCSSEKDIFDWDVESGKIVRRFKGDKHGTAVVVASRDRAVLAVGSSTVRLVDLETGKRIRKFSTGHAATVRCMAFS--GKYLATACEGDVRFVNIFDT-EAAGEAAIQSISVSAPPSSLALCI-----------------GSLSQTAHSLFCCCENSVSVVKWSSEAGSLTESTHFSAAKLFYPAKTGSFSALAARPVVGRESSHLAVACGESSAPNFVTVCYAE--EGHLKTSIELE------------EQQKPKSSAKTPETGKPHVIGVGKVGVGERELDDLTAPA---------------------SKRAKEGDKNQLTLGERLEALSQSL----------KPPIEEKQEA-------PKADSFATVLAQALQSSDDSLLEQCLGMQDQKVIETSIDRLALDRVLPLVLKIHEKMERTPTRN--LHVWLRAIVTKHTSYLMSIPDLQTKLSGLYQTLNQRISLFPKLLSLSGRLELALANVMCSNDDSAEDAASIPQAVYDD 480          
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Match: A0A1W0A0L7_9STRA (Utp12 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0L7_9STRA)

HSP 1 Score: 211 bits (538), Expect = 7.350e-56
Identity = 191/646 (29.57%), Postives = 298/646 (46.13%), Query Frame = 3
Query:    6 MTSSELTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYTCVDWHRPRP---QGRKRSSSGQPKALPLGLIALGTEQGTVTIWDLQRGVVSKSLGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVADGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFESGHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDYPVYMQLRVTASAXXXXXXXXXXXVAGGNGDLVTALVGCDSGTLSVLQVRREAAG---GVVHKPQECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIAPKFATVGFLDPANGALLAEARVEGA-AAAATANDAAKKMRVKGADTTPEAGHVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALADERSLPLGERLEALSRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVESMATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVSKFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLASFPKFLDLAGRLDLVLAHVGPAAKAEEVSAEPENVYNESD 1922
            M    LT F P       VS DNR+++WDA SG+LR +  E  +   +YTC+ W    P   QG K++   +P +  LG++ALGT  GT+ +WDL++G V   L       +      G AV   D   +  S   +L++ +++ ++LEW+V +  +VRK++    GAT L L    + LA   +S+++ ++A+ K+ +    GHA AV  + FS CGRY+ +++   RFV ++D   +D +     +     P+++  RV  +                     T +   D+G   V Q    ++      V K  +  VV A + A  + + V             VA G+ + P F TV   D   GA + E  +E     +   N + KK +   A ++     +   G      T VD    +  DA++        A                    L ER++AL++ LD+A             + T+ A  R   +  S+ TVL+QALQS D ALLE CL + D  V++ T  +L +  V PFL  +V KFEKRP R   +  WI+ ++  HT YLM+VPG+  +L+ L Q +  RL  FP+   L GRL+LVL  +   A    V   P   +NE D
Sbjct:    4 MNKERLTAFSPCLASFVHVSDDNRVKVWDAASGALRVELKERDHLNYKYTCLAWSAKSPWAVQGGKKNK--RPASSGLGIVALGTSTGTIVVWDLEKGEVVARLAR-----ENNDHGHGSAV--QDIVFS--STGSSLYSCASEKYLLEWNVKEATMVRKIKIGSEGATKLALSSNDEVLAAGSSSIKLFDVASGKKSKRLTFGHASAVTQLFFSECGRYVFSSSS-ERFVNVFDT-KSDENDPFFNFACDSTPIHVNGRVVVAKKS-------------KNSTATVVATTDAGAAFVWQHTMTSSSKPIAPVAKIIQSSVVIAALTADASSVAVT------------VARGAVMKPHFETVAAQDD-EGAFIGEITLEALDTTSLLMNKSNKKAKQDEASSSTHVPSLIERGGSTKTSTMVD----DTYDAEDXXXXXXXXA-------------------TLEERVQALAQELDEAEDADIDPVLTENYKSTSRA--RAQASSSSLVTVLEQALQSKDSALLESCLRVHDIKVIDETCRRLSATKVFPFLLLLVEKFEKRPTRGATMCVWIKYLMLNHTAYLMTVPGVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIAGRATNVAVDETPAITFNEED 585          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig978.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJM9_ECTSI2.660e-11238.46Utp12 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7R9U6H1_9STRA3.670e-6732.80Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A5D6XKP2_9STRA4.700e-6633.54Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
A0A4D9D9A1_9STRA3.760e-6331.48Utp12 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A2D4BWN2_PYTIN7.740e-6233.17Utp12 domain-containing protein n=1 Tax=Pythium in... [more]
A0A485LGV1_9STRA5.050e-6131.51Aste57867_21150 protein n=1 Tax=Aphanomyces stella... [more]
W4H0X9_9STRA7.810e-5830.53Utp12 domain-containing protein n=6 Tax=Aphanomyce... [more]
A0A067BZW6_SAPPC8.010e-5830.18Utp12 domain-containing protein n=2 Tax=Saprolegni... [more]
A0A7S2MLY1_9STRA2.980e-5732.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1W0A0L7_9STRA7.350e-5629.57Utp12 domain-containing protein n=1 Tax=Thraustoth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig978contigP-wetherbeei_contig978:2452..6303 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FJM9
Preferred nameWDR43
PFAMsUtp12,WD40
Model size2217
Max annot lvl2759|Eukaryota
KEGG rclassRC00097,RC00609
KEGG koko:K01966,ko:K14546
KEGG ReactionR01859
KEGG Pathwayko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,ko03008,map00280,map00630,map00640,map01100,map01120,map01130,map01200,map03008
KEGG ModuleM00373,M00741
Hectar predicted targeting categoryother localisation
GOsGO:0000462,GO:0000785,GO:0000792,GO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0006139,GO:0006355,GO:0006356,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0033553,GO:0033554,GO:0034455,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045893,GO:0045935,GO:0045943,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0071496,GO:0071704,GO:0071840,GO:0080090,GO:0090069,GO:0090070,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2000232,GO:2000234,GO:2001141
Exons9
Evalue2.09e-113
EggNOG OGsKOG4547@1|root,KOG4547@2759|Eukaryota
EC2.1.3.15,6.4.1.3
Descriptionpositive regulation of rRNA processing
Cds size2133
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig978.2.1prot_P-wetherbeei_contig978.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig978 2457..6224 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187109.851278-UTR-P-wetherbeei_contig978:2451..24561683187109.851278-UTR-P-wetherbeei_contig978:2451..2456Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig978 2452..2456 +
1683187109.9574163-UTR-P-wetherbeei_contig978:6224..63031683187109.9574163-UTR-P-wetherbeei_contig978:6224..6303Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig978 6225..6303 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187109.8614137-CDS-P-wetherbeei_contig978:2456..25461683187109.8614137-CDS-P-wetherbeei_contig978:2456..2546Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 2457..2546 +
1683187109.8731863-CDS-P-wetherbeei_contig978:2714..28041683187109.8731863-CDS-P-wetherbeei_contig978:2714..2804Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 2715..2804 +
1683187109.881627-CDS-P-wetherbeei_contig978:2916..30451683187109.881627-CDS-P-wetherbeei_contig978:2916..3045Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 2917..3045 +
1683187109.8904092-CDS-P-wetherbeei_contig978:3205..38121683187109.8904092-CDS-P-wetherbeei_contig978:3205..3812Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 3206..3812 +
1683187109.9012046-CDS-P-wetherbeei_contig978:4154..44171683187109.9012046-CDS-P-wetherbeei_contig978:4154..4417Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 4155..4417 +
1683187109.9115663-CDS-P-wetherbeei_contig978:4540..49421683187109.9115663-CDS-P-wetherbeei_contig978:4540..4942Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 4541..4942 +
1683187109.9218237-CDS-P-wetherbeei_contig978:5111..51701683187109.9218237-CDS-P-wetherbeei_contig978:5111..5170Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 5112..5170 +
1683187109.9344301-CDS-P-wetherbeei_contig978:5379..56481683187109.9344301-CDS-P-wetherbeei_contig978:5379..5648Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 5380..5648 +
1683187109.9460244-CDS-P-wetherbeei_contig978:6000..62241683187109.9460244-CDS-P-wetherbeei_contig978:6000..6224Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig978 6001..6224 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig978.2.1

>prot_P-wetherbeei_contig978.2.1 ID=prot_P-wetherbeei_contig978.2.1|Name=mRNA_P-wetherbeei_contig978.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=711bp
MTSSELTVFDPSKELLAIVSADNRLRLWDATSGSLRQQYVEGKNFGRRYT
CVDWHRPRPQGRKRSSSGQPKALPLGLIALGTEQGTVTIWDLQRGVVSKS
LGEGMSLPKMTALAFGIAVAGDDAAAAAVSAAPTLFTASADTHVLEWSVA
DGQLVRKLRGLKHGATSLCLHPGGKWLAVAGASVRILNLATEKRVRTFES
GHAKAVAAMCFSPCGRYLAAAAEGSRFVELYDCADADASAAIATYTLQDY
PVYMQLRVTASAAAAGAAVAAGAVAGGNGDLVTALVGCDSGTLSVLQVRR
EAAGGVVHKPQECRVVSAGVKAGGAPLEVVRACFALSGDELLVAHGSPIA
PKFATVGFLDPANGALLAEARVEGAAAAATANDAAKKMRVKGADTTPEAG
HVTGPGEMGLRGTEVDLGAANAADADEDAGRAAATAGGDAGDDSAAAALA
DERSLPLGERLEALSRVLDQASAQRQRQRQPREAQETAAAAGRKLPTVES
MATVLQQALQSSDDALLEQCLNLGDPMVVEATVDKLPSVLVLPFLQRVVS
KFEKRPARAVVLSTWIRAVLTRHTGYLMSVPGLASQLARLSQMVSYRLAS
FPKFLDLAGRLDLVLAHVGPAAKAEEVSAEPENVYNESDDMGSEDGDEDG
EEDDDEDDGGEEGEVAEADDGAGAAPGAAGAGGEEEAVDDADGADDDVED
DEGGDGTDSE*
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mRNA from alignment at P-wetherbeei_contig978:2452..6303+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig978.2.1 ID=mRNA_P-wetherbeei_contig978.2.1|Name=mRNA_P-wetherbeei_contig978.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3852bp|location=Sequence derived from alignment at P-wetherbeei_contig978:2452..6303+ (Phaeothamnion wetherbeei SAG_119_79)
CTAAAATGACTTCGAGTGAGTTGACCGTGTTTGATCCATCGAAGGAGCTC TTGGCCATCGTATCTGCAGACAATCGCCTTCGCCTGTGGGATGCGGTGAG TTCGCCGGAATAGCAATAAAGGCACTTAACTACTTTGCTTGAGAGCACCA GCGATATTCGCCATTCGTTTCCTCTGTGGCGAAATTTGGGCAAATTTGCC GTGCGGCTCTGGCTGCCTTCTCCTCACTTCAAACTCTTCCTCTCTCTGTG ACGGCAAAAGCAGACTTCTGGATCGCTGCGACAACAATATGTCGAGGGAA AGAACTTTGGGAGACGCTACACATGCGTGGACTGGCATCGCCCGAGACCA CAGGTGACTGCCTTGTCAAGCCGTTTCCGCTGCGATACTAACGTCTCTTC AATCATTTGAAGCAAGGTTACGAGGCTATTCATGATGTCTTTTGGACTTT CGCTGGCTTTTGCAGGGAAGGAAGCGGTCAAGCTCTGGACAGCCAAAAGC GTTGCCGCTCGGGCTCATCGCGCTGGGGACCGAGCAGGGCACCGTCACGA TCTGGGACCTGCAGCGCGGCGTCGTGTCGAAGTCTCTGGGCGAGGTATGC TCTCGCCGCCGCTACGCGCCTTTTTGGGGAGTAGCTTCAGCAGCACGCGA TGTCGCCACCGTGATAGACCGGGCGATCACCTGCAACCATTGACCTACTG GGCCTCCTTCTCCTTACAAGTCGGTCTTGTTTTCTTCCCTTCGTTGCAAA ACAGGGAATGAGCCTCCCCAAGATGACGGCGCTGGCCTTTGGCATTGCCG TCGCCGGCGATGACGCTGCCGCGGCTGCTGTCTCCGCCGCGCCGACGCTC TTCACGGCGTCGGCGGATACGCACGTCCTCGAGTGGAGCGTCGCGGACGG CCAGCTCGTGCGCAAGCTGCGGGGCCTTAAGCACGGCGCCACCTCCCTCT GCCTGCACCCTGGTGGCAAGTGGCTGGCCGTCGCTGGCGCCAGCGTGCGA ATCCTCAACCTAGCCACGGAGAAGCGCGTCCGCACGTTTGAAAGCGGCCA CGCCAAGGCCGTCGCCGCCATGTGCTTCTCGCCGTGCGGTCGCTACTTGG CAGCTGCAGCCGAGGGCAGCCGCTTTGTCGAGCTCTATGACTGCGCCGAC GCCGACGCGTCCGCGGCGATCGCCACCTACACGCTGCAGGACTACCCTGT CTACATGCAGCTGCGGGTGACGGCTTCGGCTGCGGCGGCAGGAGCTGCCG TGGCAGCGGGGGCGGTGGCGGGAGGCAATGGGGACCTGGTTACGGCGCTG GTGGGCTGCGACTCGGGGACGCTGAGCGTGCTCCAGGTGCGGCGAGAGGC GGCCGGAGGAGGTGAGCGACATGTCGGGCAGCACTGCTCTGCGAGTTTTG AAATCTTGTGAAAGTCTGTGCTTTTGTATGTTAGGTTGGGTCGGGTGCTT TCTGCCGCCTGGTACGTATCGGCCTTGTTAGAAACGGCTGGCCTTATCTT AGCCGACTCAATCTTTAGCCGAAGATAGCCTCTTGGTGTCGTTTTCTCTG ATGGTCGAAAATTGTAGACATTCGCTGGCTTTCTACTCTCTTTTCCCTTT TGAGTACTTGTTTCCTCTTGCGTGCCAGAATCACGTCAATTTATGCCTTA AACACATTCTTTTTCTGCTCGATGCTGGCCCCGCTTCCCCACCGGCATCA CAGTGGTCCACAAGCCGCAGGAGTGCCGCGTGGTCAGCGCCGGCGTGAAA GCCGGCGGGGCACCCCTCGAGGTCGTCCGGGCGTGCTTCGCGCTGTCGGG AGACGAGCTGCTGGTGGCTCACGGCTCGCCCATCGCGCCGAAATTTGCGA CGGTCGGATTTTTAGACCCTGCGAACGGAGCGCTGCTCGCAGAGGCACGG GTCGAAGGGGCAGCGGCGGCGGCGACGGCCAACGACGCGGCGAAAAAGAT GCGCGTCAAGGGCGCGGTGAGTTCGCTTGGGCAAAAGCGTTTCGTTTTCG TCTTTTCATCGTGTTTCGCTTATCCAGGTTTCACCATTTCTTAAACTAAT ACTACAATTGATTTCTCTCGATCTGCCGAACGGGTGCAGGATACTACGCC CGAGGCCGGACATGTGACTGGGCCCGGCGAGATGGGACTCCGGGGCACCG AGGTCGATTTGGGAGCCGCCAACGCCGCCGACGCCGATGAAGACGCCGGC AGGGCGGCGGCAACGGCGGGTGGCGACGCAGGTGACGACAGTGCCGCGGC GGCGCTAGCGGATGAGCGGTCGCTGCCCCTTGGGGAGCGGCTCGAGGCGC TGAGCCGGGTGCTGGACCAGGCGTCGGCGCAGCGCCAGCGGCAGCGGCAG CCGCGGGAGGCACAGGAGACGGCGGCGGCGGCGGGGCGCAAGCTGCCGAC GGTGGAGTCGATGGCGACGGTGCTGCAACAGGCGCTGCAGTCGTCGGACG ACGCACTGCTGGAGCAGTGCCTCAACCTCGGCGACCCTATGGTGAGCTGA GGCGAGAGAGGATTTGCAGAGCGATACAGCCGCAGCGAGCTTAAATTGGA AGATTTGCCGTTAGTTTTATGATCGCGAGATGAAGGCAGAGATGCTCTTC TGCGGACTGTGGGAAATAGCGAAATTAAATCAGATGTGTTTTTTTCTTTC CCTCCTGCAGGTAGTGGAGGCGACGGTGGACAAGCTCCCTTCGGTCCTCG TCCTCCCCTTCTTGCAAAGGTGCGTTGGGGCCAGAGGGAGTTCTGCACTG GTGCTGGGTCTCTCGAGATGGAACAAGACGCGAGGCTGTTTTCTCGCTGA AGTGCACTATTGCAGGTTGCGCTGTGGATCCGCCCGCCTTGGCCATTGAT AGGACTAAAGTGTCTCGTTTCTGTTCCTAAACGTCAGACTTCTGACTTCT GTTCTGCCATTCTTCCGTCCGTCTGCAGGGTGGTGAGCAAGTTCGAGAAG CGGCCAGCGCGCGCTGTGGTGCTGTCCACGTGGATCCGGGCCGTGCTGAC GCGCCACACGGGCTACCTAATGAGCGTGCCGGGGCTGGCATCGCAGCTGG CGCGCCTCTCCCAGATGGTCAGCTACCGCCTGGCGTCCTTTCCTAAATTT CTGGACCTGGCGGGCCGCCTGGACCTCGTCCTGGCGCACGTCGGCCCCGC TGCCAAGGCCGAGGAGGTGTCGGCCGAGCCCGAAAACGTCTACAACGGTG AGTTTGGGAGTCAGCCAAGCAGAGAATGAATTGCGGGGGTGGTCGCCGTT TCCACAACAGCCGTTCGCTGACTTAGTTTCAGCAGCGCTTGTTACCCGCT CGCAGCGTCGGGGTGTCATGCTTTCACCTCCTCTCCTTGGCGATGTTACG AGTGCGGTCGCTGGTGCGGTCGCGGGCCACTGAACGAGATAGTGTTCTTG AAAAGCTCTTGGTGCCGCAGTCTTTTTCGCTTTGTCCGCGCCAGGCATTT TCACACGTAGCCAACATTTGAAATGTGTCATTGCTATGAAAGTGTTCCTT TGACTTAAGCTGACTCATCCTGCACGTACCGCGCTGCCGCTCGCCGCAGA GAGCGACGACATGGGGAGCGAAGACGGCGATGAGGATGGGGAGGAGGACG ACGACGAAGACGACGGCGGCGAGGAGGGAGAGGTGGCCGAGGCAGATGAC GGAGCGGGAGCGGCGCCGGGTGCTGCTGGCGCTGGTGGAGAGGAAGAGGC GGTTGACGACGCCGACGGCGCTGACGATGACGTCGAAGACGACGAAGGTG GCGATGGCACCGATTCAGAATGATTAGCCAGCGAAAATGTATTGGGAATA AAGAATACACTCACAGATTCTTGGTCGAACTCGTGTAAAGCGGCCACAGC GG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig978:2452..6303+

>mRNA_P-wetherbeei_contig978.2.1 ID=mRNA_P-wetherbeei_contig978.2.1|Name=mRNA_P-wetherbeei_contig978.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2133bp|location=Sequence derived from alignment at P-wetherbeei_contig978:2452..6303+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTTCGAGTGAGTTGACCGTGTTTGATCCATCGAAGGAGCTCTTGGC
CATCGTATCTGCAGACAATCGCCTTCGCCTGTGGGATGCGACTTCTGGAT
CGCTGCGACAACAATATGTCGAGGGAAAGAACTTTGGGAGACGCTACACA
TGCGTGGACTGGCATCGCCCGAGACCACAGGGAAGGAAGCGGTCAAGCTC
TGGACAGCCAAAAGCGTTGCCGCTCGGGCTCATCGCGCTGGGGACCGAGC
AGGGCACCGTCACGATCTGGGACCTGCAGCGCGGCGTCGTGTCGAAGTCT
CTGGGCGAGGGAATGAGCCTCCCCAAGATGACGGCGCTGGCCTTTGGCAT
TGCCGTCGCCGGCGATGACGCTGCCGCGGCTGCTGTCTCCGCCGCGCCGA
CGCTCTTCACGGCGTCGGCGGATACGCACGTCCTCGAGTGGAGCGTCGCG
GACGGCCAGCTCGTGCGCAAGCTGCGGGGCCTTAAGCACGGCGCCACCTC
CCTCTGCCTGCACCCTGGTGGCAAGTGGCTGGCCGTCGCTGGCGCCAGCG
TGCGAATCCTCAACCTAGCCACGGAGAAGCGCGTCCGCACGTTTGAAAGC
GGCCACGCCAAGGCCGTCGCCGCCATGTGCTTCTCGCCGTGCGGTCGCTA
CTTGGCAGCTGCAGCCGAGGGCAGCCGCTTTGTCGAGCTCTATGACTGCG
CCGACGCCGACGCGTCCGCGGCGATCGCCACCTACACGCTGCAGGACTAC
CCTGTCTACATGCAGCTGCGGGTGACGGCTTCGGCTGCGGCGGCAGGAGC
TGCCGTGGCAGCGGGGGCGGTGGCGGGAGGCAATGGGGACCTGGTTACGG
CGCTGGTGGGCTGCGACTCGGGGACGCTGAGCGTGCTCCAGGTGCGGCGA
GAGGCGGCCGGAGGAGTGGTCCACAAGCCGCAGGAGTGCCGCGTGGTCAG
CGCCGGCGTGAAAGCCGGCGGGGCACCCCTCGAGGTCGTCCGGGCGTGCT
TCGCGCTGTCGGGAGACGAGCTGCTGGTGGCTCACGGCTCGCCCATCGCG
CCGAAATTTGCGACGGTCGGATTTTTAGACCCTGCGAACGGAGCGCTGCT
CGCAGAGGCACGGGTCGAAGGGGCAGCGGCGGCGGCGACGGCCAACGACG
CGGCGAAAAAGATGCGCGTCAAGGGCGCGGATACTACGCCCGAGGCCGGA
CATGTGACTGGGCCCGGCGAGATGGGACTCCGGGGCACCGAGGTCGATTT
GGGAGCCGCCAACGCCGCCGACGCCGATGAAGACGCCGGCAGGGCGGCGG
CAACGGCGGGTGGCGACGCAGGTGACGACAGTGCCGCGGCGGCGCTAGCG
GATGAGCGGTCGCTGCCCCTTGGGGAGCGGCTCGAGGCGCTGAGCCGGGT
GCTGGACCAGGCGTCGGCGCAGCGCCAGCGGCAGCGGCAGCCGCGGGAGG
CACAGGAGACGGCGGCGGCGGCGGGGCGCAAGCTGCCGACGGTGGAGTCG
ATGGCGACGGTGCTGCAACAGGCGCTGCAGTCGTCGGACGACGCACTGCT
GGAGCAGTGCCTCAACCTCGGCGACCCTATGGTAGTGGAGGCGACGGTGG
ACAAGCTCCCTTCGGTCCTCGTCCTCCCCTTCTTGCAAAGGGTGGTGAGC
AAGTTCGAGAAGCGGCCAGCGCGCGCTGTGGTGCTGTCCACGTGGATCCG
GGCCGTGCTGACGCGCCACACGGGCTACCTAATGAGCGTGCCGGGGCTGG
CATCGCAGCTGGCGCGCCTCTCCCAGATGGTCAGCTACCGCCTGGCGTCC
TTTCCTAAATTTCTGGACCTGGCGGGCCGCCTGGACCTCGTCCTGGCGCA
CGTCGGCCCCGCTGCCAAGGCCGAGGAGGTGTCGGCCGAGCCCGAAAACG
TCTACAACGAGAGCGACGACATGGGGAGCGAAGACGGCGATGAGGATGGG
GAGGAGGACGACGACGAAGACGACGGCGGCGAGGAGGGAGAGGTGGCCGA
GGCAGATGACGGAGCGGGAGCGGCGCCGGGTGCTGCTGGCGCTGGTGGAG
AGGAAGAGGCGGTTGACGACGCCGACGGCGCTGACGATGACGTCGAAGAC
GACGAAGGTGGCGATGGCACCGATTCAGAATGA
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