prot_P-wetherbeei_contig9695.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9695.1.1
Unique Nameprot_P-wetherbeei_contig9695.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length387
Homology
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 8.040e-213
Identity = 304/392 (77.55%), Postives = 346/392 (88.27%), Query Frame = 0
Query:    4 LQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQ---VGGAEGL-----LANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            ++LC+FYE+YD NGSD+VMP GIYS+EDLK FGR++ WCPYFLARHVINHAN+LVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSV L+R  L+AA RCLG++SS+V ++K  DQ RLN EY RLVNGLA DNA      G +G+     LANPALPAD+L EAVPGNIRRAEHFV+F+RK++EHLK R+R  NVESETPLAFLHRLQQ T++E KPLRF YSRLNSLLRTLE+T LD++ PL AVADFATLV+TY++GFA+V EP GSVIPGVYEPV+QL CLD+SLAIKPV ERF SV+ITSGTLSPIDLYPKLL F PVVR+SLPMSTFR CICPLVVTRGSDQLA+STKFDLREDPSVVRNYGSL++ELA ++PDG
Sbjct:  190 IELCQFYEEYDANGSDSVMPSGIYSIEDLKDFGREKGWCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLA-DNAAGPLPAGVQGIADNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLVATYQEGFAIVIEPEGSVIPGVYEPVLQLACLDASLAIKPVFERFGSVVITSGTLSPIDLYPKLLNFHPVVRSSLPMSTFRRCICPLVVTRGSDQLAISTKFDLREDPSVVRNYGSLIIELAAAIPDG 580          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI)

HSP 1 Score: 597 bits (1539), Expect = 2.870e-206
Identity = 305/429 (71.10%), Postives = 344/429 (80.19%), Query Frame = 0
Query:    1 GGGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQD-----NAQVGG-------------------------------------AEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            GGG +LCEF+E Y  NGSDA MP GIYSL+DLK FG+++ WCPYFLARH+INHANVLVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV LD+R LDAA RCLGK+SS+V  +K +DQARLNAEY RLV+GLA       +  V G                                     A+ + ANPALPADILQEAVPGNIRRAEHFV+FMRK+VEH KTRVRVQ+VESETPLAF+HR+QQ T+LE KPL+FAYSRLNSLLRTLE+TGLD++ PL  VADFATLV TY +GFAVV EP GSV+PGVYEPVM+L CLD+SLAI+PV ERF SV+ITSGTLSP+DLYPKLLGFSPVVR +L MST R CICPLVVTRGSDQL MSTKFD R+DPSVVRNYG+L++ELA  VPDG
Sbjct:  149 GGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASVVITSGTLSPLDLYPKLLGFSPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALMIELAAIVPDG 577          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC)

HSP 1 Score: 535 bits (1378), Expect = 1.540e-180
Identity = 265/396 (66.92%), Postives = 323/396 (81.57%), Query Frame = 0
Query:    4 LQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEG----------LLANPA--LPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            ++LC++YE+Y++NG+DA +  GIYSL+DLK  G+ R WCPYFLARH+INHAN+L+YNYQY+LDPKVAGLVS+ELEAES+VVFDEAHNIDNVC EALSV LD R LD A RCLGKLS++V+ +K  D  +LN EY RLV GLA+  A +GGA G          +LANP   LP  + QEAVPGNIRRAEHF+ FM+K+VEHLKT +RV + + ++PLAFLH LQ +T+LE KPLRF YSRLNSLLRTLE+T LDE+NPLQ VADFATLV+TY +GF V+TEP GS IPG+ +PV+QL+CLD+SLAIKPV ERF+SVIITSGTLSP+DLYP LL F+PVVR S+ MS FR  ICPLVVT+GS Q  ++T+F+ R+DPSV R+YG LLVE+A  VPDG
Sbjct:  153 VELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGA-LGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDG 547          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A7S2GG08_9STRA (DNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GG08_9STRA)

HSP 1 Score: 518 bits (1334), Expect = 1.120e-178
Identity = 255/384 (66.41%), Postives = 311/384 (80.99%), Query Frame = 0
Query:    2 GGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRV----RVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELA 381
            G ++ C+FYE+YD+ GSDA +P GI+SL+DLKV GR++ WCPYFLARHVINHA VLVYNYQYMLDPKVAG+VSRELE+ESVV+FDEAHNIDNVC EALSV LDRR + AA + L  +S++V  +K  D +RL  EY RLV GL  ++   G  + +LANP+LPAD+L EAVPGNIRRAEHFV+F+R I+ HL+ R+        VE+ETPLAF+HRL   T  E KPL+FAYSRLNSLLRTLE+T LD+YNPLQ V D  TLV+TY  GFA+V EPNGS+IPGVYEP +QL CLD+S+AIKPV ERF SVIITSGTLSP+DLYP+LL F PV+R SL MS FR  ICPLV+T+GSDQ  +ST+F++R++P VVRNYG+LL++LA
Sbjct:  194 GSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGL--NDGAGGQTDTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLA 575          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA)

HSP 1 Score: 527 bits (1357), Expect = 6.690e-178
Identity = 258/390 (66.15%), Postives = 316/390 (81.03%), Query Frame = 0
Query:    2 GGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRV----RVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            G ++ C+FYE+YD+ GSDA +P GI+SL+DLKV GR++ WCPYFLARHVINHA VLVYNYQYMLDPKVAG+VSRELE+ESVV+FDEAHNIDNVC EALSV LDRR + AA + L  +S++V  +K  D +RL  EY RLV GL  ++   G  + +LANP+LPAD+L EAVPGNIRRAEHFV+F+R I+ HL+ R+        VE+ETPLAF+HRL   T  E KPL+FAYSRLNSLLRTLE+T LD+YNPLQ V D  TLV+TY  GFA+V EPNGS+IPGVYEP +QL CLD+S+AIKPV ERF SVIITSGTLSP+DLYP+LL F PV+R SL MS FR  ICPLV+T+GSDQ  +ST+F++R++P VVRNYG+LL++LA ++PDG
Sbjct:  194 GSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGL--NDGAGGQTDTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLASTIPDG 581          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A5D6XMP7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMP7_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 2.370e-174
Identity = 255/398 (64.07%), Postives = 317/398 (79.65%), Query Frame = 0
Query:    4 LQLCEFYEQYD-RNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQV-----GGAEG--------LLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            ++ C FYE+Y+ R G +AV+PPG+Y+++DLK  G QR WCPYFL R+ ++ A+V+VYNYQYMLDPKV+ +VSR  E ES+VVFDEAHNIDNVC EALSV LDRR LD A R L  +S+ V  +K +D ARL+AEY RLV GL   +A V     G A+         LLANP LP D+L EA+PGNIRRAEHF+AFMR+++E+L+TR+RV+NVESETP AFLH L Q  +++AKP++F Y+RLNSLLRTLE+T L+E+N L AVADFATLV+TY DGF ++ EP      GV++PV+QL CLD+SLAI+PV ERF SV+ITSGTLSPIDLYP+LL FSPVVR SLPMS +R+CICP+V+TRGSDQ+ +STKFDLR+D SVVRNYGSLL+ELA S PDG
Sbjct:  153 VETCSFYEKYESRKGDEAVLPPGVYAVDDLKALGAQRGWCPYFLTRYAVSFADVIVYNYQYMLDPKVSAMVSRTFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAHVARVKQADTARLDAEYRRLVEGLRSSDAVVAPTYMGAADRPIDTANDLLLANPVLPDDVLAEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLHQAIAMDAKPMKFCYTRLNSLLRTLEVTNLEEFNSLTAVADFATLVATYADGFMLIIEPFDGT-SGVHDPVLQLACLDASLAIRPVFERFASVVITSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGSLLLELAASCPDG 549          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A2P4X6T2_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6T2_9STRA)

HSP 1 Score: 506 bits (1304), Expect = 1.560e-173
Identity = 254/399 (63.66%), Postives = 310/399 (77.69%), Query Frame = 0
Query:    4 LQLCEFYEQYD-RNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGA--------------EGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            ++ C FYE YD R   D V+P G+YS+EDLK  G Q+ WCPYFL R+V+  A+V+VYNYQYMLDPKV+ LVSR  E ES+VVFDEAHNIDNVC EALSV LDRR LD A R L  LSSQVN LK +D++RL+AEY RLV GL   NA V                 + L+ANP LP D+L EA+PGNIRRAEHFVAFMR+++E+L+ R+RV+ VESETP AFLH L Q  ++E KP++F Y+RLNSLLRTLE+T L+EYN L  VADFATLV+TY +GF ++ EP  S   GV++PV+QL+CLD+SLAI+PV ERF SVIITSGTLSPIDLYP+LL F+PV+R SLPMS +R+ ICPLV+TRGSDQ+ +STKFDLR+D SVVRNYG+LL+E+A   PDG
Sbjct:  157 VETCSFYENYDARKSDDTVLPSGVYSVEDLKEIGAQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPTYTDPTTNNAIDTANDILIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDG 554          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA)

HSP 1 Score: 516 bits (1328), Expect = 6.160e-173
Identity = 254/391 (64.96%), Postives = 312/391 (79.80%), Query Frame = 0
Query:    1 GGGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGG----AEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            G  ++LCEFYEQYD NG+D  +P GIYSLEDL+  GR+R WCPYFLARHV+ HANVL+YNYQYMLDPKVAGLVS ELE +SVVVFDEAHNIDNVC EA+SV + R  LDA+ R LG L+S+V  +KASD  RLNAEY RLV+GLA      G      + +L+NP+LPADIL E+VPGNIR+AEHF+ FMRKIV HLK ++R    + ETP AFLH+L + T LEAKP++F YSRLNSLLRTLE+T LD+++ L  +ADFATL++TY++GFAVV EP+ S+IPG+ EPV++L+CLD+SLAIKPV +RF+SVIITSGTLSPIDLYP++L FSPVV +SLPMS FR+ ICPL+VTRG +   MS+ F +R D  V+ NYG LLV+    VPDG
Sbjct:  193 GASVELCEFYEQYDANGTDTAIPYGIYSLEDLRDLGRERGWCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPAPGSYTVATDSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLLATYQEGFAVVLEPDSSIIPGLTEPVLELSCLDASLAIKPVFKRFKSVIITSGTLSPIDLYPRILDFSPVVSSSLPMSIFRSSICPLIVTRGDNMTKMSSAFGVRNDDRVISNYGKLLVDTCRIVPDG 583          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: H3G8C6_PHYRM (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8C6_PHYRM)

HSP 1 Score: 510 bits (1314), Expect = 7.080e-173
Identity = 251/386 (65.03%), Postives = 311/386 (80.57%), Query Frame = 0
Query:    4 LQLCEFYEQYD-RNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEGLL-ANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            ++ C FYE+YD R   D V+PPG+YS++DLK  G Q+ WCPYFL R+V+  A+V+VYNYQYMLDPKV+ LVSR  E ES++VFDEAHNIDNVC EALSV LDRR LD A R L  LSSQV+ LK +D+A+L+AEY RLV GL   +A V     ++ ANP LP D+L EA+PGNIRRAEHFVAFMR+++E+L+ R+RV+ VESETP AFLH L Q  S+E KP++F Y+RLNSLLRTLE+T L+EYN L  VADFATLV+TY DGF ++ EP  S   GV++PV+QL+CLD+SLAI+PV ERF SV+ITSGTLSPIDLYP+LL F+PV+R SLPMS +R+ ICPLV+TRGSDQ+ +STKFDLR+D SVVRNYG+LL+E+A   PDG
Sbjct:  156 VETCSFYEKYDARKSDDTVLPPGVYSVDDLKDLGVQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIIVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVSKLKQADKAKLDAEYRRLVEGLRSSDAVVAPTHDIMIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAISMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLADVADFATLVATYADGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDG 540          
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: K3WFP6_GLOUD (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP6_GLOUD)

HSP 1 Score: 511 bits (1315), Expect = 7.380e-173
Identity = 252/401 (62.84%), Postives = 316/401 (78.80%), Query Frame = 0
Query:    2 GGLQLCEFYEQYDRNGSD-AVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGA--------------EGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 387
            G +++C FYE Y+   SD  V+P GIY+++DLK  G Q+ WCPYFL R+V++ A+V+VYNYQYMLDPKV+ +VSR  E ES+VVFDEAHNIDNVC EALSV LDRR LD A R L  +SSQVN +K +D+ARL+AEY RLV GL   +A V                 + L+ANP LP D+L EA+PGNIRRAEHF+AFMR+++E+L+TR+RV+NVESETP AFLH L Q  S+E KP++F Y+RLNSL+RTLE+T L+E+N L AVADFATLV+TY DGF ++ EP      GV++PV+QL CLD+SLAI+PV ERF SVIITSGTLSPIDLYP+LL F+PV+R SLPMS +R+CICP+V+TRGSDQ+ +STKFDLR+D SVVRNYG+LL+E+A S PDG
Sbjct:  150 GEVEVCSFYENYESRKSDETVLPAGIYNVDDLKELGVQKGWCPYFLTRYVVSFADVIVYNYQYMLDPKVSAMVSRSFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISSQVNRMKQADKARLDAEYRRLVEGLRSSDAVVAPTYTNPNTQQHIDTSNDILMANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAISMETKPMKFCYTRLNSLMRTLEVTNLEEFNSLAAVADFATLVATYADGFMLIIEPYDGQ-SGVHDPVLQLACLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGTLLLEMAASCPDG 549          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJZ4_9STRA8.040e-21377.55General transcription and DNA repair factor IIH he... [more]
D8LDN2_ECTSI2.870e-20671.10General transcription and DNA repair factor IIH he... [more]
K8YZX4_NANGC1.540e-18066.92General transcription and DNA repair factor IIH he... [more]
A0A7S2GG08_9STRA1.120e-17866.41DNA helicase (Fragment) n=1 Tax=Dictyocha speculum... [more]
A0A7S2D9H7_9STRA6.690e-17866.15General transcription and DNA repair factor IIH he... [more]
A0A5D6XMP7_9STRA2.370e-17464.07General transcription and DNA repair factor IIH he... [more]
A0A2P4X6T2_9STRA1.560e-17363.66General transcription and DNA repair factor IIH he... [more]
A0A7R9U4D1_9STRA6.160e-17364.96General transcription and DNA repair factor IIH he... [more]
H3G8C6_PHYRM7.080e-17365.03General transcription and DNA repair factor IIH he... [more]
K3WFP6_GLOUD7.380e-17362.84General transcription and DNA repair factor IIH he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001945RAD3/XPD familyPRINTSPR00852XRODRMPGMNTDcoord: 256..274
score: 60.9
coord: 345..362
score: 57.14
coord: 125..144
score: 52.86
coord: 186..207
score: 46.1
coord: 225..247
score: 53.42
coord: 161..179
score: 70.68
IPR001945RAD3/XPD familyPANTHERPTHR11472:SF1GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPDcoord: 6..387
IPR006554Helicase-like, DEXD box c2 typeSMARTSM00488deadxpdcoord: 1..132
e-value: 7.2E-5
score: -67.5
IPR010614DEAD2PFAMPF06733DEAD_2coord: 6..106
e-value: 2.8E-27
score: 95.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..140
e-value: 1.1E-22
score: 82.4
IPR010643Helical and beta-bridge domainPFAMPF06777HBBcoord: 122..266
e-value: 8.9E-32
score: 110.3
IPR013020ATP-dependent helicase Rad3/Chl1-likeTIGRFAMTIGR00604TIGR00604coord: 5..387
e-value: 2.7E-106
score: 354.7
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 6..387
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 81..90
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 1..137
score: 16.063667

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9695contigP-wetherbeei_contig9695:2..2337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9695.1.1mRNA_P-wetherbeei_contig9695.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9695 2..2337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9695.1.1 ID=prot_P-wetherbeei_contig9695.1.1|Name=mRNA_P-wetherbeei_contig9695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=387bp
GGGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHV
INHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALS
VTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQ
VGGAEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQ
NVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPL
QAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPV
LERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTR
GSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001945RAD3/XPD
IPR006554Helicase-like_DEXD_c2
IPR010614DEAD_2
IPR027417P-loop_NTPase
IPR010643HBB
IPR013020Rad3/Chl1-like
IPR045028DinG/Rad3-like
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3