prot_P-wetherbeei_contig964.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig964.2.1
Unique Nameprot_P-wetherbeei_contig964.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length336
Homology
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BLAST of mRNA_P-wetherbeei_contig964.2.1 vs. uniprot
Match: A9V8J1_MONBE (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V8J1_MONBE)

HSP 1 Score: 72.4 bits (176), Expect = 3.060e-10
Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 0 
Query:  121 EILPGIEKLLRVSTAEVYVDLGHQFATGCLLIDPLIEALGPALCMVRIRRQRLDVAYSLASGSHGPPCNPTQSYWWFVCRTRDAAL----YVDDDRWSALDPFQQHLWVTDEIEAQWQLLLLRQPQLRHFDLDWDAALEQRHFELVARLAG 267
            +++P +E+ L      ++   GH    G  L+  L+  LGPA+ +VR+RR R+ VA S        P  P ++   F C   D+ L    + D   ++ L  FQ+ L  +DE+E QWQ L    P  R F L+W  ++ +   + +A   G
Sbjct:  728 DMVPFMEQQLLAKNRSIFFSSGHDMTVG--LLPALVSYLGPAVSLVRVRRDRVRVAKSFTISV---PLGP-EAQRCFFCINPDSLLNRCPWRDRQAFAQLSSFQRFLHASDEMECQWQSLRHSFPHQRTFVLNWTTSISEEEMQALAYFVG 872
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig964.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A9V8J1_MONBE3.060e-1029.80Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig964contigP-wetherbeei_contig964:2768..4662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig964.2.1mRNA_P-wetherbeei_contig964.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig964 2614..5255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig964.2.1 ID=prot_P-wetherbeei_contig964.2.1|Name=mRNA_P-wetherbeei_contig964.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
MNRRRTRALAATLAAAAGVVQAGGDGNPPCSVILAWTHGHEGTTALARAD
KYECPSRRVEVRMQGQLRNRTRSTVVHKFEKNFKIPLLAHSNPACHNDTS
RMRAGSRDAWMNQSAYEIHSEILPGIEKLLRVSTAEVYVDLGHQFATGCL
LIDPLIEALGPALCMVRIRRQRLDVAYSLASGSHGPPCNPTQSYWWFVCR
TRDAALYVDDDRWSALDPFQQHLWVTDEIEAQWQLLLLRQPQLRHFDLDW
DAALEQRHFELVARLAGCAVRADADFSPTKRHVHGDAAERNASELRLRDA
AYRETVEYSAEQQRLAAPRQWWSLSAAAAAGRDLE*
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