mRNA_P-wetherbeei_contig13117.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A6H5KIP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP7_9PHAE) HSP 1 Score: 151 bits (382), Expect = 2.030e-40 Identity = 70/104 (67.31%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 1 EQVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAEL 312 EQV L VL RG +WCLNAGENY V L TWW+F + ++ TNVTHAYLSEHV+T ELK +R IR NR KHTRHKSA+N +I RCTN WWNP NSK LQAEL Sbjct: 734 EQVGALAKVLRRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSAANLEVIRRCTNMWWNPINSKFLQAEL 837
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: D7FZY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY3_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.020e-33 Identity = 60/91 (65.93%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 1 EQVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCW 273 EQV L VL RG +WCLNAGENY V L TWW+F + ++ TNVTHAYLSEHV+T ELK +R IR NR KHTRHKSASN +I RCTN W Sbjct: 362 EQVEALAKVLGRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSASNLEVIRRCTNMW 452
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A6H5JNB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB8_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.590e-33 Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 1 EQVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAELAA 318 EQ+ +L VL RG +WCLNAGEN + TWW F +++Q TNVTHAYLSE + LKN ++ IR NR KH RH SASN +I+RCT+ WWNP SK+LQAEL A Sbjct: 646 EQLMRLAEVLRRGLIWCLNAGENSEIKASTWWNFVEEIQNTNVTHAYLSEGSVPSGLKNAMQKAIRRNRLKHDRHLSASNVDVIQRCTHMWWNPIRSKKLQAELKA 751
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A7S2G2D6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2D6_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.570e-32 Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 4 QVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAELAA 318 Q++KL+ VL G +WCLN GENY ++ W +FAD L TNVTH Y SEHV++ E K +R +IRANRAKH+RH S N +I+RCTNCWWNP S+ L AA Sbjct: 124 QLQKLSKVLQLGRIWCLNIGENYRITPGAWNQFADSLLATNVTHMYASEHVISVEQKTRMRDIIRANRAKHSRHNSIDNIAVIKRCTNCWWNPIQSRSLMGLRAA 228
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A835ZG86_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG86_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.820e-32 Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 1 EQVRKLTAVL-LRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAE 309 +Q+ L A+L +WCLN GE Y V+LD WWKF ++L+ T+VTH YLSEHVLT +LK +R IRANRAKH HK N +IERCTN WWNP N+++LQ + Sbjct: 688 DQIDALAAILRTHDRLWCLNLGELYKVTLDRWWKFCEELRGTHVTHMYLSEHVLTADLKTAMRDAIRANRAKHALHKDVDNLAVIERCTNMWWNPINARDLQGD 791
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A6H5K7R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R7_9PHAE) HSP 1 Score: 127 bits (319), Expect = 6.620e-32 Identity = 61/106 (57.55%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 1 EQVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAELAA 318 EQ+ L VL +G +WCLNAGEN + TW F ++ T VTHAYLSE + LK +R IRANR KHTRHKSASN +I RCTN WWNP KELQAEL A Sbjct: 841 EQLMMLAKVLRKGNIWCLNAGENSKIKPSTWCDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIRRCTNMWWNPILCKELQAELKA 946
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A6H5KUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR8_9PHAE) HSP 1 Score: 124 bits (312), Expect = 5.800e-31 Identity = 59/106 (55.66%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 1 EQVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAELAA 318 EQ+ L VL +G +WCLNAGEN + TW F +++ T VTHAYLSE + LK +R IRANR KHTRHKSASN +I +CTN WWNP KE QAEL A Sbjct: 781 EQLMMLARVLRKGNIWCLNAGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPVGLKKAMRTAIRANRVKHTRHKSASNVKVIRQCTNMWWNPVLCKESQAELKA 886
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A7S3Y3X2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3X2_HETAK) HSP 1 Score: 115 bits (288), Expect = 3.730e-29 Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 4 QVRKLTAVLLRG-GVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAEL 312 Q+ +L VL RG VW +N GEN+ W +FA+ L+ T+VTH Y+SE ++ LK + R +IR NR KH RHKS N +IERCTNCWWNPSN +ELQ L Sbjct: 145 QLERLAQVLRRGLSVWSVNLGENWRPCAAAWERFAEALRYTHVTHLYISEKAISAGLKTKFRDIIRENRKKHDRHKSVDNLDVIERCTNCWWNPSNGRELQEAL 248
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: D8LFH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH6_ECTSI) HSP 1 Score: 112 bits (280), Expect = 1.610e-27 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 1 EQVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCW 273 EQ+R L VL RG +WCLNAGEN ++ WW F ++++ T+VTHAYLSE + L ++ IRANRAKHTRHKSASN +I RCTN W Sbjct: 276 EQLRMLAKVLRRGNIWCLNAGENSGITPSAWWWFVEEIKTTSVTHAYLSEECIPCGLTETMQKAIRANRAKHTRHKSASNVEVIRRCTNMW 366
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Match: A0A1Z5JS48_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS48_FISSO) HSP 1 Score: 112 bits (281), Expect = 8.320e-27 Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 1 EQVRKLTAVLLRGG--VWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEHVLTPELKNEIRAVIRANRAKHTRHKSASNWHIIERCTNCWWNPSNSKELQAEL 312 EQ+ L VL R +WCLN GE Y V TW KFA L+ T +TH Y SEHV++ ELK++IR+ IR NR+KH+ H SN I +CT+CWWNP N+K L+ L Sbjct: 550 EQMMSLLQVLQRSSCKIWCLNIGETYKVKQKTWKKFAIGLKKTKITHMYASEHVISTELKDQIRSTIRDNRSKHSMHCDPSNLDTIIKCTHCWWNPVNTKSLRPYL 655 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13117.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13117.1.1 >prot_P-wetherbeei_contig13117.1.1 ID=prot_P-wetherbeei_contig13117.1.1|Name=mRNA_P-wetherbeei_contig13117.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp EQVRKLTAVLLRGGVWCLNAGENYNVSLDTWWKFADDLQLTNVTHAYLSEback to top mRNA from alignment at P-wetherbeei_contig13117:1015..1605- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13117.1.1 ID=mRNA_P-wetherbeei_contig13117.1.1|Name=mRNA_P-wetherbeei_contig13117.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig13117:1015..1605- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13117:1015..1605- >mRNA_P-wetherbeei_contig13117.1.1 ID=mRNA_P-wetherbeei_contig13117.1.1|Name=mRNA_P-wetherbeei_contig13117.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig13117:1015..1605- (Phaeothamnion wetherbeei SAG_119_79)back to top |