mRNA_P-wetherbeei_contig13115.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13115.1.1
Unique NamemRNA_P-wetherbeei_contig13115.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A6N7GNZ1_9HYPH (Chitooligosaccharide deacetylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GNZ1_9HYPH)

HSP 1 Score: 332 bits (851), Expect = 5.920e-113
Identity = 150/183 (81.97%), Postives = 162/183 (88.52%), Query Frame = 1
Query:    1 MWIEKPLTQPGRWPAGVRLPIIVSVHHQSEEASVVFPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFASHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            MW E    Q  RWP GVRLPII+SVHHQSEEA+ VF DGQVDPFDYGERQYGGRRGAWRLLEIL KH V GTWI+CGAT+EKYPQISR  K AGH+ AGHTYEHEMMCNYP  EELRLIRKTVSVFED LGE L+GWRTCFASHNTIDLLLEHF+FEWDAS+WNDDLPYVIEG+G+++LEIPF
Sbjct:    1 MWTEVRPQQTARWPDGVRLPIIISVHHQSEEAAYVFDDGQVDPFDYGERQYGGRRGAWRLLEILSKHNVRGTWIVCGATLEKYPQISREAKAAGHSFAGHTYEHEMMCNYPAKEELRLIRKTVSVFEDLLGEHLKGWRTCFASHNTIDLLLEHFEFEWDASMWNDDLPYVIEGHGRRILEIPF 183          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A1F9HYG4_9DELT (NodB homology domain-containing protein n=3 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F9HYG4_9DELT)

HSP 1 Score: 320 bits (819), Expect = 3.110e-108
Identity = 141/183 (77.05%), Postives = 161/183 (87.98%), Query Frame = 1
Query:    1 MWIEKPLTQPGRWPAGVRLPIIVSVHHQSEEASVVFPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFASHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            MW EK   QP RWP G+RLPI+VSVHHQSEEA+  FPDGQ DPFDYGERQYG RRGAWRLLEIL KH V GTW+ICGAT+EKYP++SRAVK+AGH IAGHTY HE+MCN+PP  EL LI+KTVS FED LGE ++GWRTCFASHNTIDL+LEHFDFEWD S+WNDDLPY+IEG+G++VL+IPF
Sbjct:    1 MWKEKHPDQPLRWPDGIRLPILVSVHHQSEEATCPFPDGQPDPFDYGERQYGARRGAWRLLEILGKHGVRGTWLICGATLEKYPEVSRAVKQAGHCIAGHTYAHEVMCNFPPHTELGLIKKTVSAFEDLLGEHIQGWRTCFASHNTIDLILEHFDFEWDGSMWNDDLPYIIEGHGRQVLQIPF 183          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A1F9HZL6_9DELT (NodB homology domain-containing protein n=3 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F9HZL6_9DELT)

HSP 1 Score: 319 bits (818), Expect = 5.050e-108
Identity = 144/183 (78.69%), Postives = 159/183 (86.89%), Query Frame = 1
Query:    1 MWIEKPLTQPGRWPAGVRLPIIVSVHHQSEEASVVFPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFASHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            MW EK   Q  RWP GVRLPI+VSVHHQSEE + +FPD Q DPFDY ERQYG RRGAWRLLEILDKH V GTW+ICGAT+EKYP++SRAVKKAGH+IAGHTYEHEMMCN P + EL L+ KTVS FED LGERLRGWRTCFASHNTIDL+LEHFDFEWD SIWNDDLPY++EGYG++VLEI F
Sbjct:    1 MWKEKHPNQSVRWPQGVRLPIVVSVHHQSEEMTSLFPDRQPDPFDYSERQYGARRGAWRLLEILDKHGVRGTWLICGATLEKYPEVSRAVKKAGHSIAGHTYEHEMMCNLPRETELVLMNKTVSAFEDLLGERLRGWRTCFASHNTIDLILEHFDFEWDGSIWNDDLPYIVEGYGREVLEISF 183          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A534VA81_9DELT (NodB homology domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534VA81_9DELT)

HSP 1 Score: 296 bits (759), Expect = 4.560e-99
Identity = 132/183 (72.13%), Postives = 152/183 (83.06%), Query Frame = 1
Query:    1 MWIEKPLTQPGRWPAGVRLPIIVSVHHQSEEASVVFPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFASHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            MW  K   +  RWP  VRLPI VSVHHQSEEA+   PDGQ DPFDY ERQYG RRGAWRLLEI+ KH V GTW+ICGAT+EKYP++SRAV++AGH IAGHTY HEMMCN PP  E+ LI+KTV+VFED LGE +RGWRTCFASHNT+DLLLEH D EWD S+WNDDLP +IEG+G+++LEIPF
Sbjct:    1 MWNGKGYKRSFRWPQNVRLPIAVSVHHQSEEATCPMPDGQPDPFDYSERQYGARRGAWRLLEIMAKHGVRGTWLICGATLEKYPEVSRAVQQAGHCIAGHTYAHEMMCNMPPHSEIALIKKTVAVFEDLLGEHIRGWRTCFASHNTLDLLLEHSDIEWDGSMWNDDLPSLIEGHGREILEIPF 183          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A7C4TNM2_9HYPH (Chitooligosaccharide deacetylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TNM2_9HYPH)

HSP 1 Score: 293 bits (749), Expect = 1.610e-97
Identity = 130/183 (71.04%), Postives = 149/183 (81.42%), Query Frame = 1
Query:    1 MWIEKPLTQPGRWPAGVRLPIIVSVHHQSEEASVVFPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFASHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            MW E PL +PG WP GVRLPII+SVHHQSEEA V+ PDGQVDP DY ERQYGGRRGAWRLLEI+ KH VLGTWIICGAT EKYP +SR V K GH+IAGH Y HE   +  P +EL ++RKTV VFED +G  LRGWRTC  SH T+DLLLEHFDF+WDAS+WNDDLPY+IEG+G+  +E+PF
Sbjct:    1 MWKEVPLKKPGSWPPGVRLPIIISVHHQSEEACVMLPDGQVDPRDYYERQYGGRRGAWRLLEIMSKHNVLGTWIICGATCEKYPDVSREVIKLGHSIAGHGYAHEAPSDLLPHQELEVMRKTVRVFEDMMGHHLRGWRTCAKSHVTLDLLLEHFDFQWDASVWNDDLPYIIEGHGRSFMEVPF 183          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A7V5AMN5_9DELT (DUF2334 domain-containing protein n=1 Tax=Syntrophobacterales bacterium TaxID=2282155 RepID=A0A7V5AMN5_9DELT)

HSP 1 Score: 159 bits (402), Expect = 3.300e-45
Identity = 75/173 (43.35%), Postives = 113/173 (65.32%), Query Frame = 1
Query:   37 WPAGVRLPIIVSVHHQSEEASVVFPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRT--CFASHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            WP   R+ ++++  +Q+E  S + P G+++   Y ERQYGGR G WR+L+ILDK+ +  T+ I G T E+YP+  RA++  GH IAGH YEHE +  Y  +EE ++I KT+   E   G R  GWR+     S NT++LL E +DF +++   N+DLPYVI+  GK+++EIP+
Sbjct:   13 WPNQARMAVLLTFDYQAEVGSPLLPSGKINYAIYTERQYGGRHGIWRVLDILDKYNIKSTFFISGVTAERYPESVRAIRDRGHDIAGHAYEHEELHLYSREEEKKIIGKTIEALERVSGVRPLGWRSPKVLISENTLELLAE-YDFVYNSDFLNEDLPYVIKVGGKELIEIPY 184          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A6I1RAJ2_9DELT (Polysaccharide deacetylase family protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6I1RAJ2_9DELT)

HSP 1 Score: 119 bits (298), Expect = 1.460e-30
Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   91 EASVVFPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNY-PPDEELRLIRKTVSVFEDQLGERLRGWRTCFASHNTIDLLLEHFDFEWDA 480
            EA+ VF DGQ+DPFD+ E+QYGGRRGAWRLLEI+ KH V GTW+ICGAT EKYPQ+SRAVKKAGH +   +  H        P + L ++++  +   +     +  + T  +  NT D +L+     +DA
Sbjct:    6 EAAAVFADGQLDPFDHSEKQYGGRRGAWRLLEIIAKHGVRGTWLICGATCEKYPQVSRAVKKAGHNVERRSALHGRWTRTRTPGDSLCVLQQCRAGRSNHQSFSVNPYVTWLS--NTPDFMLQALKTSFDA 134          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A7J9YS91_9ACTN (Polysaccharide deacetylase family protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7J9YS91_9ACTN)

HSP 1 Score: 112 bits (281), Expect = 7.300e-27
Identity = 62/190 (32.63%), Postives = 99/190 (52.11%), Query Frame = 1
Query:   10 EKPLTQPGRWPAGVRLPIIVSVHHQSEEASVV---------FPDGQVDPFDYGERQYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFASH--NTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIP 546
            E P      WP G R+ ++++   Q +  + V         + +G ++  D  +RQYG RRG  R+LEIL ++++  T+   G T E YP++  A+   GH +A H Y H  +     DEE   +    +  E   G R  GWR+   S   NTI +L E  D+ +++   NDDLPY++E  G++++EIP
Sbjct:   29 ELPTALADNWPDGARILVMLTFDTQGDVDAAVPGYQHSSGFWREGAINYCDLTQRQYGTRRGVQRILEILARYEIRATFPTTGITAEWYPEVVEAIVAGGHEVAAHGYRHVPLHTLDADEERAELEAATAAIETASGRRPIGWRSPMYSTTPNTIAILSE-LDYVYNSDFHNDDLPYLLENDGRRMVEIP 217          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A6L3C5F2_9CHLR (NodB homology domain-containing protein (Fragment) n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A6L3C5F2_9CHLR)

HSP 1 Score: 108 bits (270), Expect = 6.850e-26
Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 1
Query:   34 RWPAGVRLPIIVSVHHQS-EEASVVFPDGQVD-------PFDYGER--------QYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFA-SHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            +WP G R+ + V V+++   E SV+  D + +       P   GER        +YG R G WRL+ +++K+ V GT+  C   +E+ P++   + + GH + GH    E       D E   IR+ V       G+R  GW T +  S NT +L+ E   FE+D + +NDDLPY  + +GK  L +P+
Sbjct:   17 KWPNGARIAVSVVVNYEEGSEYSVLDGDPRQETGGESPSPMGPGERDLANESFYEYGSRVGVWRLMRVMEKNNVKGTFFACALALERNPEVGPEIIRQGHEVMGHGNRWEEYYKMDRDSEREAIRQAVESITRTSGQRPIGWYTRYGPSLNTRELVFEEGGFEYDCNAYNDDLPYYTQVHGKPWLVVPY 205          
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Match: A0A6L7TIX4_9CHLR (Polysaccharide deacetylase family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7TIX4_9CHLR)

HSP 1 Score: 107 bits (267), Expect = 6.090e-25
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 1
Query:   34 RWPAGVRLPIIVSVHHQS-EEASVVF--PDGQVD-----PFDYGER--------QYGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGHTYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFA-SHNTIDLLLEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF 549
            RWP G R+ + V V+++   E S++   P G+       P   GER        +YG R G WR+++ILD++ V GT+  C   +E+ P++     + GH + GH    E       + E   I++ V       G+R  GW T +  S NT +L++E   FE+D + +NDDLPY  + +GK  L +P+
Sbjct:   17 RWPGGARIAVSVVVNYEEGSEYSILDGDPSGETSGESPSPLGPGERDLANESFFEYGSRVGVWRIMDILDRNNVKGTFYACALALERNPEVGPEAIRRGHEVMGHGNRWEEYYKMDRNSEREAIKQAVESITRICGQRPLGWYTRYGPSVNTRELVVEEGGFEYDCNSYNDDLPYYTQVHGKPWLVVPY 205          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7GNZ1_9HYPH5.920e-11381.97Chitooligosaccharide deacetylase n=1 Tax=Hyphomicr... [more]
A0A1F9HYG4_9DELT3.110e-10877.05NodB homology domain-containing protein n=3 Tax=un... [more]
A0A1F9HZL6_9DELT5.050e-10878.69NodB homology domain-containing protein n=3 Tax=un... [more]
A0A534VA81_9DELT4.560e-9972.13NodB homology domain-containing protein n=1 Tax=De... [more]
A0A7C4TNM2_9HYPH1.610e-9771.04Chitooligosaccharide deacetylase n=1 Tax=Hyphomicr... [more]
A0A7V5AMN5_9DELT3.300e-4543.35DUF2334 domain-containing protein n=1 Tax=Syntroph... [more]
A0A6I1RAJ2_9DELT1.460e-3046.56Polysaccharide deacetylase family protein (Fragmen... [more]
A0A7J9YS91_9ACTN7.300e-2732.63Polysaccharide deacetylase family protein n=1 Tax=... [more]
A0A6L3C5F2_9CHLR6.850e-2632.28NodB homology domain-containing protein (Fragment)... [more]
A0A6L7TIX4_9CHLR6.090e-2532.28Polysaccharide deacetylase family protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13115contigP-wetherbeei_contig13115:2..550 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1268068.PG5_42060
PFAMsPolysacc_deac_1
Model size549
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K22278
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.79e-25
EggNOG OGsCOG0726@1|root,COG3195@1|root,COG0726@2|Bacteria,COG3195@2|Bacteria,1MV3V@1224|Proteobacteria,1RPKM@1236|Gammaproteobacteria
EC3.5.1.104
Descriptiondeacetylase
Cds size549
COG categoryG
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185974.4463198-CDS-P-wetherbeei_contig13115:1..5501683185974.4463198-CDS-P-wetherbeei_contig13115:1..550Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13115 2..550 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13115.1.1prot_P-wetherbeei_contig13115.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13115 2..550 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13115.1.1

>prot_P-wetherbeei_contig13115.1.1 ID=prot_P-wetherbeei_contig13115.1.1|Name=mRNA_P-wetherbeei_contig13115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp
MWIEKPLTQPGRWPAGVRLPIIVSVHHQSEEASVVFPDGQVDPFDYGERQ
YGGRRGAWRLLEILDKHKVLGTWIICGATVEKYPQISRAVKKAGHAIAGH
TYEHEMMCNYPPDEELRLIRKTVSVFEDQLGERLRGWRTCFASHNTIDLL
LEHFDFEWDASIWNDDLPYVIEGYGKKVLEIPF
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mRNA from alignment at P-wetherbeei_contig13115:2..550-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13115.1.1 ID=mRNA_P-wetherbeei_contig13115.1.1|Name=mRNA_P-wetherbeei_contig13115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig13115:2..550- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGATCGAAAAACCGCTGACGCAACCCGGACGCTGGCCCGCCGGCGT GCGGCTGCCGATCATCGTTAGCGTTCATCATCAGTCCGAAGAGGCCTCCG TCGTGTTCCCCGACGGCCAGGTCGATCCGTTCGACTATGGCGAGCGCCAG TATGGCGGCCGTCGCGGCGCGTGGCGGCTTCTGGAGATTCTCGACAAGCA CAAGGTTCTGGGCACCTGGATCATCTGCGGCGCCACGGTGGAGAAATATC CGCAGATTTCGCGCGCGGTAAAGAAGGCCGGCCACGCGATCGCCGGCCAC ACCTACGAGCACGAGATGATGTGCAACTACCCGCCGGACGAGGAGTTGCG GCTGATCCGCAAGACCGTCTCGGTGTTCGAGGACCAGTTGGGCGAGCGCC TGCGCGGTTGGCGCACCTGTTTCGCCAGCCACAACACCATCGACCTGCTG CTCGAGCATTTCGACTTCGAATGGGACGCCAGCATCTGGAACGACGACCT GCCCTATGTGATCGAGGGCTACGGCAAGAAGGTGCTGGAGATTCCGTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13115:2..550-

>mRNA_P-wetherbeei_contig13115.1.1 ID=mRNA_P-wetherbeei_contig13115.1.1|Name=mRNA_P-wetherbeei_contig13115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig13115:2..550- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGATCGAAAAACCGCTGACGCAACCCGGACGCTGGCCCGCCGGCGT
GCGGCTGCCGATCATCGTTAGCGTTCATCATCAGTCCGAAGAGGCCTCCG
TCGTGTTCCCCGACGGCCAGGTCGATCCGTTCGACTATGGCGAGCGCCAG
TATGGCGGCCGTCGCGGCGCGTGGCGGCTTCTGGAGATTCTCGACAAGCA
CAAGGTTCTGGGCACCTGGATCATCTGCGGCGCCACGGTGGAGAAATATC
CGCAGATTTCGCGCGCGGTAAAGAAGGCCGGCCACGCGATCGCCGGCCAC
ACCTACGAGCACGAGATGATGTGCAACTACCCGCCGGACGAGGAGTTGCG
GCTGATCCGCAAGACCGTCTCGGTGTTCGAGGACCAGTTGGGCGAGCGCC
TGCGCGGTTGGCGCACCTGTTTCGCCAGCCACAACACCATCGACCTGCTG
CTCGAGCATTTCGACTTCGAATGGGACGCCAGCATCTGGAACGACGACCT
GCCCTATGTGATCGAGGGCTACGGCAAGAAGGTGCTGGAGATTCCGTTC
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