Homology
BLAST of mRNA_P-wetherbeei_contig927.1.1 vs. uniprot
Match:
F0Y2V3_AURAN (Helicase C-terminal domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2V3_AURAN)
HSP 1 Score: 63.9 bits (154), Expect = 8.730e-7
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 4 SFKVRVAIPNWHCASLSDRAG-------KIFMPRNSLAAAAVHQRAKER---VFGVASNMLDLQSGGARAEGITLLPPGDDWLALAL 234
+ K+ V P W AG ++ P +SLAA AVH A +R V+ VA M+D GGARAE +T+LPPGD+WL LAL
Sbjct: 711 AVKLDVPKPAWKLVFAPASAGASAPPSAQVLTPFHSLAAVAVHHAADDRDATVYAVAGAMVDTAGGGARAESVTVLPPGDEWLGLAL 797
BLAST of mRNA_P-wetherbeei_contig927.1.1 vs. uniprot
Match:
A0A8J2X0N8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0N8_9STRA)
HSP 1 Score: 60.1 bits (144), Expect = 1.470e-5
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 61 AGKIFMPRNSLAAAAVHQRAKER--VFGVASNMLDLQSGGARAEGITLLPPGDDWLALAL 234
+ ++ MP +SL+A AVH + V+ VA MLD GGARAE +TLLPPG++WLAL L
Sbjct: 1008 SAQVLMPFHSLSAVAVHHSTTKDQVVYAVAGTMLDTAGGGARAEQLTLLPPGEEWLALCL 1067
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig927.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 8.73e-7 / Id = 43.68 Expect = 1.47e-5 / Id = 51.67 Sequence F0Y2V3_AURAN A0A8J2X0N8_9STRA
Match Name E-value Identity Description
F0Y2V3_AURAN 8.730e-7 43.68 Helicase C-terminal domain-containing protein n=1 ... [more] A0A8J2X0N8_9STRA 1.470e-5 51.67 Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Seed ortholog 44056.XP_009035162.1 PFAMs DEAD,HA2,Helicase_C,XPG_I Model size 2013 Max annot lvl 2759|Eukaryota KEGG ko ko:K18995 Hectar predicted targeting category other localisation Exons 1 Evalue 1.43e-07 EggNOG OGs COG1643@1|root,KOG0920@2759|Eukaryota EC 3.6.4.13 Description helicase activity Cds size 2010 COG category L BRITE ko00000,ko01000,ko03012
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1683187084.7282767-CDS-P-wetherbeei_contig927:232..2242 1683187084.7282767-CDS-P-wetherbeei_contig927:232..2242 Phaeothamnion wetherbeei SAG_119_79 CDS P-wetherbeei_contig927 233..2242 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig927.1.1
>prot_P-wetherbeei_contig927.1.1 ID=prot_P-wetherbeei_contig927.1.1|Name=mRNA_P-wetherbeei_contig927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=670bp
DSFKVRVAIPNWHCASLSDRAGKIFMPRNSLAAAAVHQRAKERVFGVASN back to top mRNA from alignment at P-wetherbeei_contig927:233..2243+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig927.1.1 ID=mRNA_P-wetherbeei_contig927.1.1|Name=mRNA_P-wetherbeei_contig927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2011bp|location=Sequence derived from alignment at P-wetherbeei_contig927:233..2243+ (Phaeothamnion wetherbeei SAG_119_79)GACTCATTCAAGGTGCGCGTGGCCATCCCCAACTGGCACTGCGCCTCGCT
CAGCGACCGCGCGGGCAAGATCTTCATGCCCCGTAACTCGCTCGCCGCCG
CCGCCGTCCACCAGCGGGCCAAGGAGCGCGTCTTCGGCGTCGCTAGCAAC
ATGCTCGACCTGCAGAGCGGCGGCGCCCGGGCCGAGGGCATCACCCTGTT
GCCGCCGGGGGACGACTGGCTGGCGCTGGCGCTCCTGACATTCGGGCTGC
CGGCGGCGGGGCTCAACCACAGGCTGGGCGCGGAGCGGGTGGCGGCAGCA
GCGGACTTCCACGAGGCGTGCTGCGTCCTGGATGAGTCCGTCGAGCCGCA
TCCCGAGCTGGTTCGGCGCCTGCACACGCTCTTCGGACTGGTGTCTGACG
CCGACGCGGCAGCGGCGGCGCGGTCGGCGGCCGCGGCCGCCGCAGGTGAG
GAGGAGGAGATTCTGTACCGCGGCAATCGCCGGCGGGGGCGGGGCGGCGA
TGACCGCGTCGTGGGCAGCGGCAGCGTCCAGCGCCGCGCTGCGGGCGGCG
GCTACGCGCTGTCCGCAGCGGCTGGGCCTGTGGCGGCTGCGGCGGCAGCG
CCGGTGCGGGCGCCGGCGCCAGCGGCGACAATGAGGGCTTCGGCTTCGGA
TCGTGCGTCGCCGGCTCCCGGGTCGTCAGCAGCGGTTGCGGCGACGGGCC
TGATGGGGGCCGGGGCGGCGGCTGCCAGGAGAGGGCCGCGACAAGCAAAG
AAGGCTGCGGCAGCAACAGCGGCTGTGGTGGCAGCGGGCGCTCCGTTCCA
AGCGCGGGCGCAGAGGCCGACGGCACGCCCGGATAAACCATCGAGGGCAG
CAGTCAGCGCAGCGGCGGCCGCGGCGGCTGAGGGCTATGTTCTTCCGTCA
GCGGCGTATTACTCTGTGCCGCCGGCTGCGGCGCCCATTTCCCTGGCAGA
GCTCGAAGCGGCGATCTTCGCGAAGTCATCGCCCGCGGCGCCGCCGCCGG
TTGCAGCAGCTCCGGCCGCCAAGGTTCCCCGAGCGCGAAAGCCTGAGCAC
CTGCTGGCAGAGCAGCGGGCCGTCGCCGCCGCCACGGCGTTCCTGAAAGA
AGCCAACGGCGCCATTATAGCGGTGGGGGCAGTCGACGATGCCATCTTTG
CGGCGGTCGGCTTTCGCGTCGGCGGGCCGGATGGCAAGAGGGCGCTCGGC
CGCGCCACCCCCATCGTATCATTCCTGCGCCGCATTCCGGCGGTGGCGGT
GAAGAAGGGGCGGGCGTACTATTTGATGGTAGAACACCATCAGAGCAGCG
ACGCCGCTGTTAAAGGCCGCGGCGGCGCCGCCATCAACGGCGGCGGCAGC
GCGGCTGTCAACGATGGCAGCGCTGATCACGGCAGCATCAGCGGCAGCGG
TGGCGACCATGGCGGTGGCGGCGGCCGTGTTGGGGCGCTTCCCGCTGTTG
ACAGCGGCGGTTGGGCCAATGCGACCAACGGCGCGTGGAAGGATGATAGC
GGGTGGGTCTCGCCCTCCGCCTATGCCAACGGCGGAGCTTCTGGCCGCGA
CGGCAACGACGACGACACGCGGAACAGCAGATGCAGCGCGCCGAGCTTGG
CGGCGCTGATGCTGGCGGTCCAGCGGCTCCTGCGCCTGTCTGCGCCGTAC
TTTGTGAAGGAGATGTCGCTGATCCACGAGATCGCAAGCATCAAGGACCC
TGAGTCCGGCTCGTGGCTGGCGTTGACGCCAGCGGCCATCAAGCGGGCGA
CGGGCAGCAAGCAAATGTCGGTGGCGACGTTCCTGCAGAGCGTGCCGGGC
GTTGAGAAAGACGGCAATAAGCATAAATACCGGTGGTGCGGCAACGACGC
GGCGGCGGCAGCAGCGCCGGCGGACGACGAGACATTCTCGCTGGAGGGAT
CGGCGGCGGCGGCAACAGTGCCAGCGTCGCGGTCCGCCCTCGCAACACCT
GCCTCCGTCACAAGAGGGGTGCATGCGCGCTCGCCGGTACTCGTACTGCC
CAAGCGGATG back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig927:233..2243+
>mRNA_P-wetherbeei_contig927.1.1 ID=mRNA_P-wetherbeei_contig927.1.1|Name=mRNA_P-wetherbeei_contig927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2010bp|location=Sequence derived from alignment at P-wetherbeei_contig927:233..2243+ (Phaeothamnion wetherbeei SAG_119_79) back to top