mRNA_P-wetherbeei_contig896.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: R1E090_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E090_EMIHU) HSP 1 Score: 197 bits (500), Expect = 3.840e-59 Identity = 116/223 (52.02%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 256 LWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHARAAAFGLRDAASA-----------------------SDVPDVEGDRLFGIPSFSVKVGQQTV 855 LW+FSRPHTLIGSALCIP ++ +AAPPG+++ +A F+ V A+VP+LL+N+++TGLNQ+ D+ IDRVNKP LP+A+G +S G ATVL L GG+ +G A P C S L ATL SA++GTAYS PPVRLKR P LA++CI++VRG++IN GF+AHA A A+G + +A DVPDV GD +GI SFSV+VGQ V Sbjct: 2 LWRFSRPHTLIGSALCIPALSLYAAPPGAAISSAVFVPLVLYAMVPSLLVNVYITGLNQLFDIPIDRVNKPTLPLASGEMSPAVGAATVLLCLAGGLALGW-AFPPLC-SPALRATLCGSALLGTAYSCPPVRLKRSPLLASLCIMSVRGALINWGFFAHA-AEAYGASVSTAALQAWRCAGPVAFFTLFGTVIALVKDVPDVPGDARYGIRSFSVRVGQARV 221
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A7S3WUB5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WUB5_EMIHU) HSP 1 Score: 197 bits (500), Expect = 1.270e-57 Identity = 116/223 (52.02%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 256 LWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHARAAAFGLRDAASA-----------------------SDVPDVEGDRLFGIPSFSVKVGQQTV 855 LW+FSRPHTLIGSALCIP ++ +AAPPG+++ +A F+ V A+VP+LL+N+++TGLNQ+ D+ IDRVNKP LP+A+G +S G ATVL L GG+ +G A P C S L ATL SA++GTAYS PPVRLKR P LA++CI++VRG++IN GF+AHA A A+G + +A DVPDV GD +GI SFSV+VGQ V Sbjct: 87 LWRFSRPHTLIGSALCIPALSLYAAPPGAAISSAVFVPLVLYAMVPSLLVNVYITGLNQLFDIPIDRVNKPTLPLASGEMSPAVGAATVLLCLAGGLALGW-AFPPLC-SPALRATLCGSALLGTAYSCPPVRLKRSPLLASLCIMSVRGALINWGFFAHA-AEAYGASVSTAALQAWRCAGPVAFFTLFGTVIALVKDVPDVAGDARYGIRSFSVRVGQARV 306
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A7S2CJS5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJS5_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.620e-56 Identity = 118/241 (48.96%), Postives = 148/241 (61.41%), Query Frame = 1 Query: 247 WRTLWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHA----------------------------RAAAFGLRDA---------ASASDVPDVEGDRLFGIPSFSVKVGQQTVF 858 +R LW+F+RPHTLIGSALC+P I AFA P G+ +FTA ++ AL+PAL IN+++TGLNQ+TDVEIDRVNKP LP+AAG L+M V SLL G+ +G + C + PL TLV SA+IGT YS+ P RLKRFP AA+CILTVRG+VINIGFY HA +A GL A DVPDV GD+L+GI S +V++G + VF Sbjct: 64 YRGLWEFTRPHTLIGSALCVPAIHAFAIPSGAPLFTARLFQSCVWALIPALFINIYITGLNQITDVEIDRVNKPYLPLAAGHLTMPEAKWVVGLSLLAGLALGFLHP---CSTFPLRMTLVLSALIGTFYSLEPFRLKRFPFFAALCILTVRGAVINIGFYGHAVQNLGLDVTAQNALASPVIRKILSTLPFESAKCGLATLFFALFGTVIALMKDVPDVVGDKLYGIKSLTVRLGPERVF 301
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A7S4BI21_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BI21_CHRCT) HSP 1 Score: 191 bits (486), Expect = 3.280e-56 Identity = 110/227 (48.46%), Postives = 149/227 (65.64%), Query Frame = 1 Query: 256 LWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHARAAAFGLRDAASAS---------------------------DVPDVEGDRLFGIPSFSVKVGQQTV 855 LW+FSRPHT++GSA+CIP ++ FAAP G+++ A+ + V ALVP+L++N+++ GLNQ+ DVEIDRVNKP+LP+A+G LS+ G A VL SL G+ +G A P C S L ATL+ SA++GT YS+PP RLKRFP LA+ CI++VRG++IN GF+ HA F A+A DVPDV+GDR +GI SFSV++GQ V Sbjct: 12 LWKFSRPHTILGSAVCIPALSIFAAPAGTTIPFASLVPLVLYALVPSLMMNVYIVGLNQLFDVEIDRVNKPKLPLASGELSLPAGAAIVLGSLAAGLALGW-AVPPLC-SPALQATLIGSALLGTVYSLPPFRLKRFPLLASFCIMSVRGALINWGFFMHASLTVFKSALTATAGGMAAQRWRCLAPVAFFTLFGTVIALIKDVPDVDGDRRYGISSFSVRMGQSQV 236
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A7S0EPK6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPK6_9EUKA) HSP 1 Score: 192 bits (489), Expect = 6.730e-56 Identity = 120/220 (54.55%), Postives = 151/220 (68.64%), Query Frame = 1 Query: 256 LWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAH-------ARAAAFGLRDA-------------ASASDVPDVEGDRLFGIPSFSVKVGQQTV 855 LW+F+RPHTLIGSALCIP + AFAAPPG+ + +A A+ AL+P+LLIN+++TGLNQ+ D+E+DRVNKP LP+A G +S G A VLASL+GG+ +G A P C + L ATLV SA++GTAYS PP+RLKRFP LA +CI+ VRG++IN GF+ H A A A G R A DVPDV GDR FGI SFSV++GQQ V Sbjct: 97 LWRFTRPHTLIGSALCIPALLAFAAPPGA-LLSAPLGYALLWALLPSLLINVYITGLNQLYDIELDRVNKPTLPLANGDMSPAVGTAIVLASLVGGLALGW-AHPRYC-TDALRATLVGSALLGTAYSAPPLRLKRFPLLAGLCIMGVRGALINWGFFMHGIACLGPAAAGAAGWRCLVPVGFFTIFGTVIALVKDVPDVPGDRQFGIRSFSVQLGQQRV 313
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A7S3YG08_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG08_HETAK) HSP 1 Score: 189 bits (480), Expect = 1.930e-54 Identity = 114/236 (48.31%), Postives = 149/236 (63.14%), Query Frame = 1 Query: 238 QSFWRTLWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHARAAAF--------------------GLRDA---------ASASDVPDVEGDRLFGIPSFSVKVGQQTVF 858 Q F +TLW F+RPHTLIGSALCIP I +AAP ++ + ++ A +P+LL+NL++TGLNQ+TDVEID+++KP LPI AGRLS VL SL+ GV +G A P C + L ATL+ SA++GT YS+PP RLKRFP LAA+CI+ VRG++IN+GF+AHARAA + GL A A DVPD +GDR I SF+V+ GQ +F Sbjct: 98 QFFLKTLWDFTRPHTLIGSALCIPAIHLYAAPLSTNPSIVRLIHSIIFATLPSLLMNLYITGLNQITDVEIDKISKPFLPIPAGRLSKAAATIVVLVSLVAGVALGW-ADPVFC-TPALRATLLGSALLGTLYSVPPFRLKRFPLLAALCIIVVRGTLINVGFFAHARAATYKGAAAAVPPLLALPFRDLRCGLLTAYFAVFGVVIALMKDVPDAQGDRANDIRSFTVRFGQARMF 331
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A835ZGZ5_9STRA (Tocopherol phytyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGZ5_9STRA) HSP 1 Score: 186 bits (471), Expect = 5.730e-53 Identity = 122/248 (49.19%), Postives = 153/248 (61.69%), Query Frame = 1 Query: 241 SFWRTLWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRA-VAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAH--ARAAAF---------------GLRDA------------------------ASASDVPDVEGDRLFGIPSFSVKVGQQTVF 858 SF R ++ FSRPHTLIGSAL IP IA FA +S+ A L A V A+VP+LLIN+ +TGLNQ+TDVEIDRVNKPELPIAAGRLSMR +ATV A L+GGVG+G + PAA S L +V S ++G YS+PP+RLKRFP LAA+CIL+VRG+V+N FYAH ++ A G+RD A DVPD +GD I SF+V++G++ VF Sbjct: 32 SFLRVIYDFSRPHTLIGSALSIPAIAIFATGLPASLPAARQLTALVLAAMVPSLLINIHITGLNQITDVEIDRVNKPELPIAAGRLSMRAAIATVTACLVGGVGLGYLM-PAALTSHALQGVIVGSTLLGGMYSLPPIRLKRFPLLAAMCILSVRGAVMNACFYAHFALKSGALXXXXXXXLSPPSLTSGIRDVCLLPLRDARCGLLVGFFAVFGVVIALLKDVPDFKGDAQHNIRSFTVRMGRERVF 278
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A7S2R0V2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0V2_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.240e-52 Identity = 107/233 (45.92%), Postives = 144/233 (61.80%), Query Frame = 1 Query: 244 FWRTLWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHARAAAFGLRDAASA----------------------------SDVPDVEGDRLFGIPSFSVKVGQQTVF 858 FW+ LW+F+RPHT+IGSA+ IP + FAAP + F A LR++ A+ P+LL+NL++TGLNQ+TDV+ID+VNKP+LP+A+G LS V SLL + G+ + G+ L L S ++GT YS+PP RLKRFP LAA CI++VRG+VIN GF+AHA+AAAFG A + DVPD GD LF I SF+V+ G +T+F Sbjct: 22 FWKVLWRFTRPHTIIGSAMAIPALHLFAAPTFQAAFQPAVLRSIVFAMFPSLLMNLYITGLNQITDVDIDKVNKPQLPMASGDLSPTAANWIVSISLLVSLAWGM--SHPVLGTQGLNVALWGSMLLGTLYSLPPFRLKRFPFLAAFCIVSVRGAVINAGFFAHAQAAAFGGSIATTTVWNCLCSDPRCLLSSLFFAVFGLVIALMKDVPDYTGDALFNIRSFTVRAGPKTIF 252
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: A0A1Z5JVY9_FISSO (Homogentisate phytyltransferase / homogentisate geranylgeranyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVY9_FISSO) HSP 1 Score: 182 bits (463), Expect = 9.790e-52 Identity = 109/234 (46.58%), Postives = 149/234 (63.68%), Query Frame = 1 Query: 232 PYQSFWRTLWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHARAAAFGLRDAASAS-------------------------DVPDVEGDRLFGIPSFSVKVGQQTVF 858 P SF LW+F+RPHT+IGSA+ IP++ AAP ++ + +++ A++P+LL+NL++TGLNQ+TDVEIDR+NKP+LPIAAG LSM+ +A V + +G V +G+ A G+ L + L ASA+ GT YS+PP+RLKRFP AA CI+ VRG VIN F+AHA+AAAF AS DVPDV GD+ I +FSV++GQ+TVF Sbjct: 57 PKPSFPTILWKFTRPHTIIGSAMAIPSLHFLAAPSIAAALSPLCWQSMLYAMIPSLLMNLYITGLNQITDVEIDRINKPDLPIAAGLLSMKTAIAIVSLAFVGSVSMGI--ANPVFGTRGLNSALWASALFGTVYSLPPLRLKRFPIWAAFCIVAVRGLVINASFFAHAQAAAFQTPTTVIASLLGNAQCLWSSIFFAVFGLVIALMKDVPDVLGDQTLNIRTFSVRLGQKTVF 288
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Match: B7G488_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G488_PHATC) HSP 1 Score: 183 bits (465), Expect = 1.040e-51 Identity = 127/313 (40.58%), Postives = 171/313 (54.63%), Query Frame = 1 Query: 22 FSVSGSGISRVPSP-TLPAWRRTTYGAPPLK-------VSLSEPSVSTNTRNGTVGAVLPSYLAEKQESEDGATPPPLPYQSFWRTLWQFSRPHTLIGSALCIPTIAAFAAPPGSSVFTAAFLRAVAVALVPALLINLFVTGLNQVTDVEIDRVNKPELPIAAGRLSMRGGVATVLASLLGGVGIGLVAAPAACGSMPLLATLVASAVIGTAYSMPPVRLKRFPSLAAVCILTVRGSVINIGFYAHARAAAFGLRDA--------------------------ASASDVPDVEGDRLFGIPSFSVKVGQQTVF 858 SV S +P P L AW + P L+ +S + S N R V + L+ K+ PP P LW+FSRPHTLIGSAL IP + + AAP + + ++A+A A+ PALL+N+++TGLNQ+TDVEID++NKP LPIAAG LS + G+AT+L +L G + +G AA + L L S ++GT YS+PP RLKRFP LAA CI+ VRG++IN F+AHA+AAAFG A DVPDV GDR + +FSV++GQ +F Sbjct: 21 LSVGLSSGYALPQPRALTAWTIGSSVVPELRSESYLQALSTIKDSERPNDRELKAATVSAADLSSKEN-------PPFPI-----VLWRFSRPHTLIGSALAIPALHSLAAPSLQAAMSRINIQAMAYAMFPALLMNIYITGLNQITDVEIDKINKPFLPIAAGILSKKDGIATILLALFGSLWLG--AANPVFSTQGLNVALWGSGILGTMYSLPPFRLKRFPLLAAFCIVAVRGAIINASFFAHAKAAAFGGSGVTVLNCLATDPRCYLSSIFFAVFGIVIALMKDVPDVAGDRNSNVRTFSVRLGQGRIF 319 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig896.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig896.2.1 >prot_P-wetherbeei_contig896.2.1 ID=prot_P-wetherbeei_contig896.2.1|Name=mRNA_P-wetherbeei_contig896.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp AAFANGRFSVSGSGISRVPSPTLPAWRRTTYGAPPLKVSLSEPSVSTNTRback to top mRNA from alignment at P-wetherbeei_contig896:2437..4072+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig896.2.1 ID=mRNA_P-wetherbeei_contig896.2.1|Name=mRNA_P-wetherbeei_contig896.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1636bp|location=Sequence derived from alignment at P-wetherbeei_contig896:2437..4072+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig896:2437..4072+ >mRNA_P-wetherbeei_contig896.2.1 ID=mRNA_P-wetherbeei_contig896.2.1|Name=mRNA_P-wetherbeei_contig896.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig896:2437..4072+ (Phaeothamnion wetherbeei SAG_119_79)back to top |