mRNA_P-wetherbeei_contig8646.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8646.1.1
Unique NamemRNA_P-wetherbeei_contig8646.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: A0A7Y6X1J8_9DELT (OmpA family protein n=2 Tax=unclassified Myxococcus TaxID=2648731 RepID=A0A7Y6X1J8_9DELT)

HSP 1 Score: 154 bits (388), Expect = 5.110e-38
Identity = 119/312 (38.14%), Postives = 155/312 (49.68%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTGLEGDTWRT-SWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVG-EELKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTS-LSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVD 939
            GL  GNH++ V  +D  G    T  T +W VD T P+T +   PP  T S+ A F+FS     +P TY+ SLDG   V   D +T   LA GAHTLAV A D AGN      +++W V+   P T +V+ PPA T ATSA F                ++  LDGG                 T  L++ G + G H L VRA  A G  D  P  + W +DT+ PDT++V  P   T   SA      + +  PV  ++ S +GG +V       V  + L DG  TLAVRAV+AAGN DA+PAT  W VD
Sbjct:  392 GLAEGNHTLAVRAVDGAGNVDPTPATYAWTVDTTAPDTTIVSGPPATTTSSSATFDFSSD--ESPVTYQCSLDGGPFVPCTDPVTYTGLADGAHTLAVRAVDAAGNADVTPAEYTWTVDATAPDTTIVSGPPAVTSATSATFDFSSNESPVT------YQCSLDGG------------PFVPCTDPLTVNGQSQGNHTLAVRAVDAVGNVDPTPATYAWTVDTTAPDTTIVSGPPATTTSSSATFDFSSDES--PVT-YQCSLDGGPFV--PCTDPVTYTGLADGAHTLAVRAVDAAGNVDATPATRTWTVD 678          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: UPI001F08862D (Ig-like domain-containing protein n=1 Tax=Pyxidicoccus caerfyrddinensis TaxID=2709663 RepID=UPI001F08862D)

HSP 1 Score: 154 bits (388), Expect = 5.270e-38
Identity = 119/313 (38.02%), Postives = 160/313 (51.12%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTGLEGDTWRT-SWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVGEE-LKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTS--LSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVD 939
            GL NG+H++EV  +D  G    T  T +W VD T P+T +   P  VT ST A+F+FS   +  P TY+ SLDG++     D +T   LA G HTLAV A D AGNV       +W V+T+ P T +V+ P   T+AT+A F                +E  LDG               F + +  ++  GLA G H L VRA  A G  D  P  + W +DT+ PDT++V  P  +T+  SA        +  PV  ++ S +G ++V          + L DG  TLAVRAV+AAGN DASPAT AW VD
Sbjct: 1096 GLSNGSHTLEVRAVDSAGNVDTTPATYTWTVDTTPPDTTIVSGPAAVTNSTSASFDFSSPDS--PVTYQCSLDGAAFTACTDPVTFTGLAQGNHTLAVRAVDAAGNVDPTPATRAWTVDTSAPDTTIVSGPATVTNATTATFDFTSNESPVT------YECSLDG-------------AAFVACTDPVTFSGLAQGNHTLSVRARDAAGNVDASPATYAWTVDTTAPDTTIVSGPPALTNSNSATFDFSSNES--PVT-YQCSLDGAAFVACTDPRTY--TGLADGNHTLAVRAVDAAGNVDASPATHAWTVD 1382          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: UPI001F0823DD (Ig-like domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI001F0823DD)

HSP 1 Score: 152 bits (385), Expect = 1.300e-37
Identity = 116/313 (37.06%), Postives = 161/313 (51.44%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTGLEGDTWRT-SWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVGEE-LKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTS--LSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVD 939
            GL NGNH++ V  +D  G    T  T SW VD + P+T +   P  VT +T A F+FS     +P TY  SLDG++ V   D +T   LA+G HTLAV A D AGNV       +W V+T  P T +V+ PPA T++T+A F                ++  LDG               F + +   +  GLA+G H L VRA  A G  D  P  H W +D + PDT++V  P+ VT+  +A        +  PV  ++ S +G ++        + LS+++ G  TLAVRAV+AAGN D +PAT AW VD
Sbjct:  961 GLANGNHTLSVRAVDAAGNVDPTPATRSWTVDTSAPDTTIVSGPAAVTSATTATFDFSSN--ESPVTYECSLDGAAFVACTDPVTFSGLANGNHTLAVRARDAAGNVDPTPATHAWTVDTTVPDTTIVSGPPALTNSTTATFDFSSNESPVT------YQCSLDG-------------AAFVACTDPRTFTGLANGNHTLAVRAVDAAGNVDPTPATHAWTVDATVPDTTIVSGPALVTNATTATFDFSSNES--PVT-YQCSVDGAAFAA--CTDPLTLSNVSAGNHTLAVRAVDAAGNVDPTPATYAWTVD 1247          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: A0A0H4WQC5_9DELT (Internalin, putative n=2 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WQC5_9DELT)

HSP 1 Score: 152 bits (384), Expect = 1.760e-37
Identity = 114/313 (36.42%), Postives = 154/313 (49.20%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTG-LEGDTWRTSWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNV-GEELKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTSLSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVDRA 945
            GL +G+H++ V  +D  G ++      +W VD T PET     P  V+ S  A F F  T   +P TY  SLDG++        T   LA G HTLAV A D  GNV      ++W ++T  P T +V+ PPA T++  A FT        A +    +E  LDG           +     +  ++  GLADG H L VRA  A G  D  P  H W +DT+ P TS+   P+ +T+  SA      +S+  PV  +E S +G ++     A  V  S L  G  TLAVRAV+AAGN D +PAT  W VD A
Sbjct: 1080 GLADGSHTLRVRAVDAAGNIDPTPASRTWTVDTTAPETSFTSTPAAVSNSASATFGF--TSNESPVTYECSLDGATFAACATPQTFTGLADGEHTLAVRARDAVGNVDASPATYTWTIDTTAPNTSIVSGPPALTNSDGATFTF------SASESGVTYECSLDG-----------ATYAACTNPVTFTGLADGSHTLTVRAVDAAGNVDPTPATHTWTVDTTPPSTSITTSPAAITNATSATFGFASDSS--PVT-YECSLDGAAFAA--CANPVTFSSLGQGSHTLAVRAVDAAGNVDPTPATHTWTVDTA 1368          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: UPI001F50C2B8 (Ig-like domain-containing protein n=2 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI001F50C2B8)

HSP 1 Score: 152 bits (383), Expect = 2.430e-37
Identity = 114/314 (36.31%), Postives = 159/314 (50.64%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTGLEGDTWRT-SWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVGEE-LKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTS--LSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVDR 942
            GL +G+H++ V  +D  G    T  T +W VD T P+T +   P  VT +T A F+F  T   +P TY  SLDG++     D +T   LA G HTL+V A D AGNV      ++W V+   P T +V+ PPA T +TSA F                ++  LDG               F + +  ++  GLADG H L VRA  A G  D  P  H W +D + PDT++V  P+ VT+  +A        +  PV  ++ S +GG++        V  + L +G  TLAVRAV+AAGN D +PAT +W VDR
Sbjct: 1208 GLADGSHTLSVRAVDAAGNVDPTPATRTWTVDRTAPDTTIVSGPATVTNATTATFDF--TSNESPVTYECSLDGAAFTACTDPVTFSGLADGGHTLSVRARDAAGNVDPTPATYAWTVDRTAPDTTIVSGPPALTSSTSATFDFSSNESPVT------YQCSLDG-------------AAFAACTDPVTFSGLADGNHTLSVRAVDAAGNVDPTPATHAWTVDRTAPDTTIVSGPALVTNATTATFDFSSNES--PVT-YQCSLDGGAFAA--CTDPVTFTGLAEGGHTLAVRAVDAAGNVDPTPATYSWTVDR 1495          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: A0A848LS83_9DELT (OmpA family protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LS83_9DELT)

HSP 1 Score: 151 bits (382), Expect = 3.270e-37
Identity = 112/314 (35.67%), Postives = 162/314 (51.59%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTGLEGDTWRT-SWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVGEE-LKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTS--LSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVDR 942
            GL  GNH++ V  +D  G    T  T +W VD T P+T     PP  + S  A F+F+     +P TY  SL+G++ V   D  T   LA G+HTLAV A D AGNV      ++W V+TA P T +V+ PPA +++ SA F                ++  LDG               F + +   +  GL DG H+L VRA  A G  D  P  + W +DT+ PDT +V  P+PVT++ +A      ++A    A ++ S +G ++V  +       +++ +G  TL+VRAV+AAGN D +PAT AW VDR
Sbjct:  832 GLAQGNHTLAVRAVDAAGNVDPTPATRTWTVDTTAPDTSFTSTPPTRSSSAVATFDFNSN--ESPVTYECSLNGATFVACSDPSTFSGLADGSHTLAVRARDAAGNVDPTPATYTWTVDTAVPDTTIVSGPPALSNSASATFDFSSNESPVT------YQCSLDG-------------AAFTACADPRTFTGLTDGNHSLAVRAVDAAGNVDPSPATYAWTVDTTAPDTLIVNGPAPVTNVTTATFDFGSDTAN---ATYQCSLDGAAFVACSNPST--FANMAEGGHTLSVRAVDAAGNVDPTPATYAWTVDR 1119          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: UPI001F082607 (OmpA family protein n=1 Tax=Myxococcus vastator TaxID=2709664 RepID=UPI001F082607)

HSP 1 Score: 145 bits (367), Expect = 2.960e-35
Identity = 111/312 (35.58%), Postives = 152/312 (48.72%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTG-LEGDTWRTSWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVG-EELKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTSLSLY-GLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVD 939
            G+   NH++ V  +D  G ++       W VD T P+T +   PP  T S+ A F+F      +P TY+ SLDG+  V   + +T   LA G+HTL V A D AGN       ++W V+   P T +V+ PPA T++TSA F           + S  +E  LDGG                 T    + GLA+G H L VRA    G  D  P  + W +DT+ PDT++V  PS  T   SA      + +  PV  ++ S +GG +V       V  + L DG  TLAVRAV+ AGN D +PAT  W VD
Sbjct:  298 GMAESNHTLAVRAVDSAGNVDPTPAEYEWTVDTTAPDTAIVSAPPATTTSSSATFDFDSN--ESPVTYQCSLDGAPVVPCTNPVTFTGLADGSHTLVVFAVDEAGNADVTPATYTWTVDATAPDTTIVSGPPAVTNSTSATFDFSSN------ESSVTYECSLDGG------------PFVPCTDPQTFTGLAEGNHTLEVRAVDVAGNVDPTPATYAWTVDTTAPDTTIVSGPSGATTSSSATFDFSSDES--PVT-YQCSLDGGPFVA--CTDPVTFTGLADGAHTLAVRAVDGAGNVDPTPATRTWTVD 584          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: A0A4Y6CFA7_MYXXA (Cell envelope biogenesis protein OmpA n=19 Tax=Proteobacteria TaxID=1224 RepID=A0A4Y6CFA7_MYXXA)

HSP 1 Score: 144 bits (363), Expect = 1.070e-34
Identity = 113/315 (35.87%), Postives = 154/315 (48.89%), Query Frame = 1
Query:    7 LNGLENGNHSVEVVPLDLTGLEGDTWRT-SWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVGEE-LKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTS--LSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVD 939
            L GL +G H++ V  +D  G E  T  T +W VD T P+T +   P  VT +T A F+FS     +P TY+ SLDG+      D  +  AL  G HTLAV A D AGN+      ++W V+T  P T +V+ P   T ++SA F                ++  LDG               F + S   +L GLADG H L VRA  A G  D  P    W +D + PDT++V  P+ VT+  SA        +  PV  ++ S NG  +     +     + L +G+ TLAVRAV+AAGN D +PA  AW VD
Sbjct:  680 LTGLADGEHTLAVRAVDAAGNEDPTPATRTWTVDATAPDTTIVSGPAAVTNATSATFDFSSN--ESPVTYQCSLDGAPFATCTDPQSYTALPEGEHTLAVRAVDAAGNMDPTPATYAWTVDTTAPDTTIVSGPSGTTTSSSATFDFSSNESPVT------YQCSLDG-------------APFTACSDPQTLTGLADGEHTLAVRAVDAAGNEDPTPATRTWTVDATAPDTTIVSGPAAVTNATSATFDFSSNES--PVT-YQCSLNGAPFAA--CSDPQSYTALPEGEHTLAVRAVDAAGNVDPTPAQYAWTVD 968          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: UPI001B2B459A (OmpA family protein n=1 Tax=Solirubrobacteraceae bacterium TaxID=2586742 RepID=UPI001B2B459A)

HSP 1 Score: 143 bits (361), Expect = 1.760e-34
Identity = 107/311 (34.41%), Postives = 148/311 (47.59%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTG-LEGDTWRTSWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNV-GEELKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTSLSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVD 939
            GL +G+H++ V   D+ G +E    + +W +D T P+T +   P  ++ S+   F+F+ T   +  T+   +D  +     D  T+ +L  G+HT  V A D AGN       ++W V+T  P T L + P A + + +A FT     G         FE QLDGG           W    S  LS+ GLADG H + VRA  A G  D  P+   W +DT+ P TS+   P+ VT   +A             A FE   +GGSW          L+ L DG  TL VRAV+ AGNADASP T  W VD
Sbjct:  518 GLADGSHTLRVKATDVVGNVETTPAQYTWVIDRTAPDTTISTKPSALSNSSTGIFSFTSTEPGS--TFECKVDAGAWAACTDPKTVTSLGDGSHTFQVRAIDAAGNTDASPASYTWTVDTTAPNTSLDSHPAALSASANASFTFSSPDGAAT------FECQLDGG----------LWIACASP-LSVVGLADGSHTVNVRAVDAAGNADASPETFTWTVDTTAPGTSVDTHPAAVTDTATADFTFSSPDG---TATFECKLDGGSWA--PCTSPKQLTGLADGSHTLEVRAVDTAGNADASPGTFTWTVD 804          
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Match: A0A0H4X958_9DELT (Internalin, putative n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4X958_9DELT)

HSP 1 Score: 141 bits (356), Expect = 9.010e-34
Identity = 111/311 (35.69%), Postives = 150/311 (48.23%), Query Frame = 1
Query:   13 GLENGNHSVEVVPLDLTGLEGDTWRT-SWNVDLTRPETRVDMHPPPVTPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLAVTATDLAGNVGEE-LKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTVGVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTSLSLYGLADGVHALLVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQGESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGNADASPATTAWIVD 939
            GL  G+H++ V   D  G    T  T +W VD T P+T +   P   T S  A F+F  T   +P TY+ SLDG++ V   D +T   LA G+HTL V A D AGNV       +W V+   P T +V+ PPA T++TSA F                +E  LDGG           +       ++  G+  G H L VRA  A G  D  P  + W +DT+ PDT++V  PS  T  R A        +  PV  ++ S +G ++V       V  + L DG  TL VRAV+AAGN D +PA+  W VD
Sbjct:  559 GLGQGSHTLAVRARDAAGNVDPTPATYAWTVDTTPPDTTIVSGPTGTTTSRSATFDF--TSNESPVTYQCSLDGAAYVSCSDPVTFTGLADGSHTLLVRAVDAAGNVDPTPASRTWMVDATPPDTTIVSGPPAATNSTSATFDFSSNESPVT------YECSLDGG----------PYVACTDP-VTFTGIGPGNHTLSVRAVDAAGNVDPTPATYAWTVDTTPPDTTIVSGPSGTTTTRDATFDFSSNES--PVT-YQCSLDGAAYVA--CTDPVTFTGLADGSHTLLVRAVDAAGNVDPTPASRTWTVD 845          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8646.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y6X1J8_9DELT5.110e-3838.14OmpA family protein n=2 Tax=unclassified Myxococcu... [more]
UPI001F08862D5.270e-3838.02Ig-like domain-containing protein n=1 Tax=Pyxidico... [more]
UPI001F0823DD1.300e-3737.06Ig-like domain-containing protein n=1 Tax=Pyxidico... [more]
A0A0H4WQC5_9DELT1.760e-3736.42Internalin, putative n=2 Tax=Myxococcus hansupus T... [more]
UPI001F50C2B82.430e-3736.31Ig-like domain-containing protein n=2 Tax=Pyxidico... [more]
A0A848LS83_9DELT3.270e-3735.67OmpA family protein n=1 Tax=Pyxidicoccus fallax Ta... [more]
UPI001F0826072.960e-3535.58OmpA family protein n=1 Tax=Myxococcus vastator Ta... [more]
A0A4Y6CFA7_MYXXA1.070e-3435.87Cell envelope biogenesis protein OmpA n=19 Tax=Pro... [more]
UPI001B2B459A1.760e-3434.41OmpA family protein n=1 Tax=Solirubrobacteraceae b... [more]
A0A0H4X958_9DELT9.010e-3435.69Internalin, putative n=1 Tax=Myxococcus hansupus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8646contigP-wetherbeei_contig8646:24..2010 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1297742.A176_00262
PFAMsBig_3_2,DUF11,OmpA,Phenol_MetA_deg,TSP_3
Model size945
Max annot lvl28221|Deltaproteobacteria
KEGG koko:K20276
KEGG Pathwayko02024,map02024
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.88e-38
EggNOG OGsCOG1470@1|root,COG2885@1|root,COG4719@1|root,COG1470@2|Bacteria,COG2885@2|Bacteria,COG4719@2|Bacteria,1MX1F@1224|Proteobacteria,42UTB@68525|delta/epsilon subdivisions,2WQUW@28221|Deltaproteobacteria,2YUE1@29|Myxococcales
DescriptionBelongs to the ompA family
Cds size945
COG categoryM
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187051.8238828-CDS-P-wetherbeei_contig8646:23..7791683187051.8238828-CDS-P-wetherbeei_contig8646:23..779Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8646 24..779 -
1683187051.8339338-CDS-P-wetherbeei_contig8646:1821..20101683187051.8339338-CDS-P-wetherbeei_contig8646:1821..2010Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8646 1822..2010 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8646.1.1prot_P-wetherbeei_contig8646.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8646 24..2010 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8646.1.1

>prot_P-wetherbeei_contig8646.1.1 ID=prot_P-wetherbeei_contig8646.1.1|Name=mRNA_P-wetherbeei_contig8646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=315bp
LPLNGLENGNHSVEVVPLDLTGLEGDTWRTSWNVDLTRPETRVDMHPPPV
TPSTYANFNFSCTGAAAPCTYRASLDGSSPVEVRDTLTLRALASGAHTLA
VTATDLAGNVGEELKFSWAVNTARPQTVLVAKPPAETHATSAHFTLLDTV
GVGAGKGSGFFEYQLDGGGAGNSGGKSGSWTRFDSTSLSLYGLADGVHAL
LVRAATAGGATDKVPQRHEWRIDTSCPDTSMVVFPSPVTHLRSAVLVVQG
ESAGGPVAGFEYSHNGGSWVGVNLAGVVHLSDLTDGQQTLAVRAVNAAGN
ADASPATTAWIVDRA
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mRNA from alignment at P-wetherbeei_contig8646:24..2010-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8646.1.1 ID=mRNA_P-wetherbeei_contig8646.1.1|Name=mRNA_P-wetherbeei_contig8646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1987bp|location=Sequence derived from alignment at P-wetherbeei_contig8646:24..2010- (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGCTAAACGGCCTAGAGAACGGGAACCATTCTGTGGAGGTCGTGCC GCTGGACCTGACCGGGCTTGAGGGCGACACGTGGCGGACCAGCTGGAACG TGGACCTGACGCGGCCGGAGACGCGCGTGGACATGCACCCGCCGCCGGTG ACGCCGTCGACATACGCCAACTTCAACTTTTCGTGCACCGTCGACGGGCG GGATCCGCCCAAAGGCTGCTCTTTTGAGTACCAGGTGAAGCATTGGGGCG GCTTAAAAACAGCGGGAAAAGGCGGGCAGAGGGAAACAAGAGGCGGGATG AGGAGATGAGGTACCTTGGTGTTGTGGCATGTGTCAGAGTTGTAGTTGGT AAGTTTTGGCGGCTCAAGCGGTGCCGGCAGCGGCGGCAGCGATCTAGTAA CTCGCAGCGCTGGCGATGGTGGCGATGGCAGCGGTGAGCAGTAGCAGCGG CGATATGGGCTGGCAGGGGCGGGGGCAGGCTATAGCGAGCAACGGCGACC TGTGGCAATGCCTGCATCCCCCCCGTTGAAGCGTCTTCTTTGCACCCTTA TTTAATGGCTTCTCTTGCAGCAAGCCGGAAACCTGCGCCTACCTCTGCGT TCCTGTCTTCTCGCTCTTTCCTTCCTTTTCTTGTTCCCAGGTGCTTCGAC CGCTGCAGCTGGCGCCAAGCAGCACGTGGTACCCGACGGACAATCCCGTC ACCTTCTACCATATCCCTGAGGGAAACCGCGTCCTCGTCGTCCGCGCGAC GGACCTTTCCACGGGTGAGGACAATGAAAAGATGGGATGATTTGCTGCTG AGAATAATGTTTCGTGTTTTCTCTTTATGTGACGTGCTGATGCTCTTCCC TTGTTTGCTTGGGAGGGAAAGAGGGGCAGGAAAGAACTGAGGAAGATATC AAGTGCAGACTTGGGGAAGGCTCTACTGACAAATCGGCTTCACAATCCGA TCATTTCCCGTTCCTTTCCTTCCAAACCAAACCGGGCAGGCCTCCACGAC GCCGTGCCGGCGGCGTTCGCCTGGACGCGCGATGCCGTCGCGCCGACGCT GCGGTGGCTCGCCACCCCTGAGAACGTCTCCGACGACGGCACGGCCTTCT TTCAGTTCGCCTGCGATGATGGCGGCGGTAACGCCGCCGCCGCCGCCGTG GCCGCCGCGGCCGCCGTCGGCGGCGGCCGTGGCGGCATGGACACGACGGC CGCCGCCGCCGCCGCGGCCGCCGGGGAGGAGGGAGCCGCCGCACCGTGCA CGTACCGCGCCAGCCTCGACGGGAGCAGCCCCGTGGAGGTGCGGGACACG CTGACACTGCGGGCGCTGGCGAGTGGCGCGCACACGCTGGCGGTGACGGC GACGGACTTGGCGGGCAACGTGGGAGAGGAGTTGAAGTTCAGCTGGGCGG TCAACACGGCGCGGCCGCAGACAGTCCTGGTGGCCAAGCCGCCGGCGGAG ACCCACGCCACGTCGGCGCACTTCACGCTGCTTGACACGGTGGGCGTCGG CGCCGGCAAGGGTAGCGGCTTCTTTGAGTACCAGCTGGATGGCGGCGGCG CCGGAAATAGCGGCGGCAAGTCGGGGTCGTGGACGCGCTTCGACAGCACG TCGCTGAGCCTGTACGGGCTGGCAGATGGTGTGCACGCGCTGCTGGTGCG TGCCGCCACCGCCGGCGGCGCCACAGACAAGGTGCCGCAGCGGCACGAGT GGCGCATCGACACGAGCTGCCCCGACACCAGCATGGTGGTATTCCCGTCG CCCGTGACGCACCTGCGGTCGGCCGTGCTGGTAGTGCAGGGCGAGAGCGC CGGCGGACCCGTGGCGGGCTTCGAGTACAGCCATAATGGCGGCAGCTGGG TCGGAGTCAATCTGGCCGGCGTCGTCCACCTCTCGGACCTGACAGACGGC CAGCAGACGCTGGCGGTGCGCGCGGTCAACGCGGCGGGCAACGCCGACGC CAGCCCGGCCACCACGGCGTGGATCGTCGACCGCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8646:24..2010-

>mRNA_P-wetherbeei_contig8646.1.1 ID=mRNA_P-wetherbeei_contig8646.1.1|Name=mRNA_P-wetherbeei_contig8646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=945bp|location=Sequence derived from alignment at P-wetherbeei_contig8646:24..2010- (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGCTAAACGGCCTAGAGAACGGGAACCATTCTGTGGAGGTCGTGCC
GCTGGACCTGACCGGGCTTGAGGGCGACACGTGGCGGACCAGCTGGAACG
TGGACCTGACGCGGCCGGAGACGCGCGTGGACATGCACCCGCCGCCGGTG
ACGCCGTCGACATACGCCAACTTCAACTTTTCGTGCACCGGAGCCGCCGC
ACCGTGCACGTACCGCGCCAGCCTCGACGGGAGCAGCCCCGTGGAGGTGC
GGGACACGCTGACACTGCGGGCGCTGGCGAGTGGCGCGCACACGCTGGCG
GTGACGGCGACGGACTTGGCGGGCAACGTGGGAGAGGAGTTGAAGTTCAG
CTGGGCGGTCAACACGGCGCGGCCGCAGACAGTCCTGGTGGCCAAGCCGC
CGGCGGAGACCCACGCCACGTCGGCGCACTTCACGCTGCTTGACACGGTG
GGCGTCGGCGCCGGCAAGGGTAGCGGCTTCTTTGAGTACCAGCTGGATGG
CGGCGGCGCCGGAAATAGCGGCGGCAAGTCGGGGTCGTGGACGCGCTTCG
ACAGCACGTCGCTGAGCCTGTACGGGCTGGCAGATGGTGTGCACGCGCTG
CTGGTGCGTGCCGCCACCGCCGGCGGCGCCACAGACAAGGTGCCGCAGCG
GCACGAGTGGCGCATCGACACGAGCTGCCCCGACACCAGCATGGTGGTAT
TCCCGTCGCCCGTGACGCACCTGCGGTCGGCCGTGCTGGTAGTGCAGGGC
GAGAGCGCCGGCGGACCCGTGGCGGGCTTCGAGTACAGCCATAATGGCGG
CAGCTGGGTCGGAGTCAATCTGGCCGGCGTCGTCCACCTCTCGGACCTGA
CAGACGGCCAGCAGACGCTGGCGGTGCGCGCGGTCAACGCGGCGGGCAAC
GCCGACGCCAGCCCGGCCACCACGGCGTGGATCGTCGACCGCGCC
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