prot_P-wetherbeei_contig8643.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8643.1.1
Unique Nameprot_P-wetherbeei_contig8643.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length118
Homology
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BLAST of mRNA_P-wetherbeei_contig8643.1.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 7.780e-15
Identity = 43/85 (50.59%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:   33 GRTGGPKKNLVAAVVRRHTIFMLGEFWTSKICPGGCGGEMVDVQGEFRVRRCNKETAIKGLNSAAVCPRFSLGAGSPGVAFTCDR 117
            G    P+K LV A+  R  + ML EF TSK+CPGGCGGEM DVQG  RVR+C   T   G+ +   CP F  G     VAF CDR
Sbjct: 1216 GHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCT--TVCVGVENP--CPLFENG-----VAFRCDR 1291
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BLAST of mRNA_P-wetherbeei_contig8643.1.1 vs. uniprot
Match: Q8QNA9_ESV1K (EsV-1-178 n=3 Tax=root TaxID=1 RepID=Q8QNA9_ESV1K)

HSP 1 Score: 72.4 bits (176), Expect = 1.990e-12
Identity = 41/85 (48.24%), Postives = 48/85 (56.47%), Query Frame = 0 
Query:   33 GRTGGPKKNLVAAVVRRHTIFMLGEFWTSKICPGGCGGEMVDVQGEFRVRRCNKETAIKGLNSAAVCPRFSLGAGSPGVAFTCDR 117
            G    P+K LV A+  R  + ML EF TSK+CPGGCGGEM DVQG  RVR+C   T   G+ +   CP F        VAF  DR
Sbjct:  589 GHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGGQRVRQCT--TVSVGVENP--CPLFENA-----VAFRYDR 664
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BLAST of mRNA_P-wetherbeei_contig8643.1.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 4.950e-9
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0 
Query:   33 GRTGGPKKNLVAAVVRRHTIFMLGEFWTSKICPGGCGGEMVDVQGEFRVR 82
            G    P+K LV A+  R  + ML EF TSK+CPGGCGGEM DVQG+ + R
Sbjct: 1428 GHASAPRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQGDCKAR 1477
[Close]
BLAST of mRNA_P-wetherbeei_contig8643.1.1 vs. uniprot
Match: A0A6H5KSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF5_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.020e-7
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:   38 PKKNLVAAVVRRHTIFMLGEFWTSKICPGGCGGEMVDVQG 77
            P+K LV A+  R  + ML EF TSK+CPGGCGGEM DVQG
Sbjct:  307 PRKKLVRAICSRVNVGMLDEFRTSKMCPGGCGGEMTDVQG 346
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8643.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L4M4_9PHAE7.780e-1550.59Resolvase/invertase-type recombinase catalytic dom... [more]
Q8QNA9_ESV1K1.990e-1248.24EsV-1-178 n=3 Tax=root TaxID=1 RepID=Q8QNA9_ESV1K[more]
A0A6H5JVT4_9PHAE4.950e-956.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSF5_9PHAE1.020e-765.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8643contigP-wetherbeei_contig8643:1923..2276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8643.1.1mRNA_P-wetherbeei_contig8643.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8643 1088..2746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8643.1.1 ID=prot_P-wetherbeei_contig8643.1.1|Name=mRNA_P-wetherbeei_contig8643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
MQQSGGDGAATGGADAGAQRRRRGIRRCALPGGRTGGPKKNLVAAVVRRH
TIFMLGEFWTSKICPGGCGGEMVDVQGEFRVRRCNKETAIKGLNSAAVCP
RFSLGAGSPGVAFTCDR*
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