mRNA_P-wetherbeei_contig8635.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8635.1.1
Unique NamemRNA_P-wetherbeei_contig8635.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: D8LL37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL37_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.120e-104
Identity = 163/296 (55.07%), Postives = 199/296 (67.23%), Query Frame = 1
Query:    1 RLCTRDIMRTRDVDGA--WARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYKDP 882
            RL TRD   T DVDGA  + R       P +   +   DI G   M LH++  NKPD  L+HDDIEG+  R  ++ ++ R +DPLEP+Y LPS+  AP   PKF RD H++SDIEG   RPLYP    R +  V D+ GA  GWKPR+ RAR EA P  + L+V DITG  FRT R T+ + PSY V GM +ADDP +SRPR LP+A+D PFYPLTTADIEGA PGW+P   +NPPLE+RR F NTN++GDI GAQ DTVKH++ TQR VNPL PVY  L GE L  PQ+P YK+P
Sbjct:   46 RLNTRDNHTTADVDGAQTFVRTSTLTNKPDS---YGVADILGTGSMRLHKD-TNKPDRQLYHDDIEGSNPRNKWLFRTTRCIDPLEPEYTLPSFTTAPPIAPKFTRDSHDVSDIEGTKSRPLYPLEQ-RHNTLVDDIEGAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTQRHVNPLNPVYDSLDGEPLANPQTPLYKEP 336          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A836CFT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT1_9STRA)

HSP 1 Score: 312 bits (800), Expect = 7.820e-103
Identity = 155/296 (52.36%), Postives = 192/296 (64.86%), Query Frame = 1
Query:    1 RLCTRDIMRTRDVDGAWARAPAT----APDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYK 876
            RL TRD+MR  D+DGA    P       PD      ++ +DI GA  + LHR   NKPD TL   D+ G   RR    ++ RHVDPL+PDY LPSY  AP P+PKF+RD +++ DIEG  P+PLY R   R+            GWKPR+ARAR EAPP  Y L+V+DIT + F+T R T+ + P Y  YG  IADDP  SRPR LP  +++PF+ LTTADIEGAQPGWKPP  L+PPLE RR + NTNYVGDI GA  D+V+HA+RT R V+PL P+Y  L GE +  P SPRY+
Sbjct:   35 RLATRDVMRVDDIDGARTHIPVANITKRPD-----LYNVNDISGACSLRLHRES-NKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLY-RYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYR 323          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A6H5K072_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K072_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 5.600e-94
Identity = 153/296 (51.69%), Postives = 187/296 (63.18%), Query Frame = 1
Query:    1 RLCTRDIMRTRDVDGA--WARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYKDP 882
            RL TRD   T DVDGA  + R       P +   +   DI G   M LH++  NKPD  L+HDDIEG+  R  +  ++ R +DPLEP+Y LPS+  A    PKF RD H++SDIEG   R                   A  GWKPR+ RAR EA P  + L+V DITG  FRT R T+ + PSY V GM +ADDP +SRPR LP+A+D PFYPLTTADIEGA PGW+P   +NPPLE+RR F NTN++GDI GAQ DTVKH++ T+R VNPL PVY  L GE L  PQ+P YK+P
Sbjct:   46 RLNTRDNHTTADVDGARTFVRTSTLTNKPDS---YGVADILGTGSMRLHKD-TNKPDRQLYHDDIEGSNPRNQWRFRTTRCIDPLEPEYTLPSFTTATPIAPKFTRDSHDVSDIEGTKSRXXXXXXX-XXXXXXXXXXXAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTERHVNPLDPVYDSLDGEPLANPQTPLYKEP 336          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: F0YFZ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFZ5_AURAN)

HSP 1 Score: 240 bits (613), Expect = 9.480e-73
Identity = 124/249 (49.80%), Postives = 158/249 (63.45%), Query Frame = 1
Query:  130 MTLHRNMVNKPDLTLFHDDIEGTRSRR-HFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRY 873
            M LH   V   D  L   DIEG++ R  HF  K+ RHV+PL P+Y LPS  L   P PKF+RDG+ ISDIEG  PR  + R   R+++ V D+ GA  GW+PR+ R R E PP   +L+V+DI    F+T R TD + P++ + GM + DD  R+ P++LP+  D P   L T DIEGA+ GWKPP  + PPLE RR F NTNY+GDI GAQPDTVKH++RTQR  NPL P Y  L G+ L  P  P +
Sbjct:    1 MKLHPRGVGGVDR-LAETDIEGSKPRPLHF--KTERHVNPLCPEYTLPSCALDMPPVPKFVRDGYGISDIEGTAPRSRF-RFAQRETYDVKDIEGAQAGWRPRHERVRREGPPMD-SLNVKDINDIGFKTTRVTDPLRPTHRINGMEVKDDMVRTMPKKLPKPHDGPTLSLYTDDIEGARCGWKPPHEMQPPLEKRRHFRNTNYIGDITGAQPDTVKHSIRTQRETNPLHPAYRSLDGDLLGDPTQPDF 244          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A7S3ZUA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA3_9STRA)

HSP 1 Score: 218 bits (555), Expect = 7.320e-66
Identity = 124/295 (42.03%), Postives = 162/295 (54.92%), Query Frame = 1
Query:    7 CTRDIMRTRDVDGA-----WARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDD-IEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRY 873
            C  +     D+DGA     + R  A  PD      +   DI+ + PM LH     +P+   +H++ IEG++ R     KS RH DPL P+Y LP  +L   P PKFIRDG+ ++DI+G VP+                   A   W+PR+ RAR EAPP    LDVRDI    F T R TD M P Y + GM   DDP R++PR LP+A   P+  L T DI GA+ GW+PP  + PP E RR + +TN+VGDI GAQ DTV+H + T+RR NPL P Y  L G+ L  P  P +
Sbjct:   32 CAHESNYVGDIDGAAPELKYMRYTARRPD-----LYVTKDIEKSSPMKLHARGP-QPNPNEWHNNPIEGSKPRETRF-KSNRHTDPLAPEYVLPRCKLEKPPTPKFIRDGYTVTDIDGTVPKXXXXXXX-XXXXXXXXXXXAQASWRPRHERARREAPPRD-GLDVRDIMDEGFTTTRVTDPMNPHYFMNGMETCDDPIRTKPRALPKAIPGPYRSLYTDDILGAKSGWRPPHEMQPPPEKRRHWRHTNFVGDIGGAQADTVQHTIPTKRRTNPLNPAYRSLDGDILPDPTKPDF 317          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A7S1UJ89_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ89_9STRA)

HSP 1 Score: 215 bits (548), Expect = 8.000e-64
Identity = 127/293 (43.34%), Postives = 152/293 (51.88%), Query Frame = 1
Query:   85 TRCFFSPHDIDGARPMTLHRNMVNKPD--------------------------LTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARL-EAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYKDP 882
            TR      DIDGA+P   +    NKPD                                   G  SR  F+   RR VDPL P Y LPS++ APAPE     D   + DI G   +PLYP  P R +H V D+ GA  GWKPRY    + E  P   +LDV DI    F++ R TD   P + V GM I DD     P+RLP  +++PF+ L + DIEGA  GW PP  L P +E RR F NTN+VGDIEGAQ DTVKH +RT+R VNPL P Y  L G  L+PP  P Y DP
Sbjct:   32 TRATNRTDDIDGAKPFLRYTQFTNKPDSFQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPSR--FLSTKRR-VDPLVPTYTLPSFRKAPAPEQPHYSDTMKVEDIAGTHSKPLYPF-PQRINHKVDDIEGAQSGWKPRYRNVFMTEERPS--SLDVSDIAKEGFKSTRVTDPNRPVHYVNGMTIQDDLRYCMPKRLPPQKNTPFFSLQSNDIEGAVSGWVPPHALRPAIEDRRHFRNTNFVGDIEGAQSDTVKHTIRTKRNVNPLNPYYRSLDGILLDPPCRPMYHDP 318          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A2P4X5K5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5K5_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.870e-52
Identity = 106/257 (41.25%), Postives = 145/257 (56.42%), Query Frame = 1
Query:   94 FFSPHDIDGARPMTLH-RNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPP---MLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
            F+  HDI G+  M LH +N     D       IEGT S     H +R  V+PLEP+Y LPS+  AP+ EPKF+RD +N+SDIEG   + +     PRD   + D+ GA  GW PR+ R   E PP    L+V DIT   F++ R T+ + P Y+V GM IADDP  SRP      RD P + L T DI+GA  G   P   ++    +  RR F +TN   DI GA+ DT+ H++R+ R ++P+ P Y GL G +++
Sbjct:    8 FYDVHDIKGSTSMELHPKNWRAGSDDRFKQLPIEGTTSHPAGFHTNRV-VNPLEPNYKLPSFTKAPSVEPKFLRDSYNVSDIEGTSIK-IRDIQHPRDGLKLNDIAGAQAGWLPRHKRGLRENPPRDI-LNVTDITNVDFKSSRVTNVLNPVYSVNGMTIADDP-LSRPLAQHPKRDKPNFTLRTDDIDGA--GCSDPATAIVAGIIMSKRRDFRDTNVTSDITGAKADTLLHSIRSTRHIDPISPKYSGLDGSRVD 258          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A7S2DC98_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DC98_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.170e-50
Identity = 79/158 (50.00%), Postives = 105/158 (66.46%), Query Frame = 1
Query:  379 RDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
            RD+H+V D+ G   GW+PR+A AR +  P    LDV+DI    F++ R    + P Y ++GM + DD  ++ PR+LP+A +  +Y L + DI GA  GWKPP+ + PP+E+RR F NTN++GDI GAQPDTV HAMRT R  NPL PVY  L GE LE
Sbjct:   32 RDTHTVTDIEGTQPGWRPRHANARRQNNPIRNELDVKDINDTGFKSQRMNCPLRPEYKIHGMTVGDDMSKTMPRKLPKAAEHEYYSLKSDDITGATCGWKPPVQIYPPMEARRHFRNTNFIGDIPGAQPDTVNHAMRTDRVTNPLEPVYRSLDGEPLE 189          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: G4Z4F7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z4F7_PHYSP)

HSP 1 Score: 177 bits (450), Expect = 5.690e-49
Identity = 107/255 (41.96%), Postives = 142/255 (55.69%), Query Frame = 1
Query:   94 FFSPHDIDGARPMTLH-RNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLL-NPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
            F+  HDI G+  M LH +N     D       IEGT S+     ++ R V+PLEP+Y LPS+  AP  EPKF+RD +N+SDIEG   + +     PRD   V D+ G   GW PR+ R   E PP    L+V+DIT   FR+ R T+ + P YTV GM  ADDP  SRP      RD P Y L T DIEGA        ++    +  RR F +TN   DI GA+ DT+ H++R+ RRV+P  P+Y  L G +++
Sbjct:   67 FYDAHDIKGSTSMELHPKNWRAGSDNRFKQLPIEGTTSQPAGF-RTDRVVNPLEPNYKLPSFVKAPPLEPKFLRDSYNVSDIEGTSIK-IRDIQHPRDGLKVDDIAGTQCGWLPRHKRGLRENPPRDI-LNVQDITNVDFRSSRVTNVLNPVYTVNGMTFADDP-LSRPLVQHPKRDKPNYALKTDDIEGASCADPATAIVAGIVMAHRRNFRDTNVTKDITGAKADTLLHSIRSTRRVDPNAPLYSALDGSRVD 317          
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: W2QK96_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK96_PHYPN)

HSP 1 Score: 176 bits (446), Expect = 2.340e-48
Identity = 103/257 (40.08%), Postives = 143/257 (55.64%), Query Frame = 1
Query:   94 FFSPHDIDGARPMTLHRNMVNKPDLTLFHD-DIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQ---PGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
            F+  HDI G+  M LH           F    IEGT SR     ++ R V+PL+P+Y LPS+  AP  EPKF+RD +N+SDIEG   + +     PRD   + D+ GA  GW PR+ R   E PP    L+V+DIT   F++ R T+ + P YTV GM ++DDP  S+P +    RD P Y L T DIEGA    P     ++    +  RR + +TN   DI GA+ DT+ H++R+ RRV+P  P Y  L G +++
Sbjct:   67 FYDAHDIKGSTSMELHPKNWRAGSEDRFKQLPIEGTTSRPAGF-RTERVVNPLQPNYKLPSFTKAPPIEPKFLRDSYNVSDIEGTSIK-VRDIQHPRDGLKLDDIAGAQAGWLPRHKRGLREHPPRDI-LNVQDITNVDFKSSRVTNVLNPVYTVNGMTVSDDP-LSQPLKQHPKRDKPSYALKTDDIEGASCTDPATA--VVAGIVMAHRRNYRDTNITSDISGAKADTLVHSIRSTRRVDPNAPQYSALDGSRVD 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LL37_ECTSI1.120e-10455.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFT1_9STRA7.820e-10352.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K072_9PHAE5.600e-9451.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YFZ5_AURAN9.480e-7349.80Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZUA3_9STRA7.320e-6642.03Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S1UJ89_9STRA8.000e-6443.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2P4X5K5_9STRA1.870e-5241.25Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A7S2DC98_9STRA7.170e-5050.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
G4Z4F7_PHYSP5.690e-4941.96Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
W2QK96_PHYPN2.340e-4840.08Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8635contigP-wetherbeei_contig8635:146..1027 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LL37
Model size882
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.06e-102
EggNOG OGs2C1R0@1|root,2RZH6@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_003400.1
Cds size861
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187051.1856484-CDS-P-wetherbeei_contig8635:145..10061683187051.1856484-CDS-P-wetherbeei_contig8635:145..1006Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8635 146..1006 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187051.2033322-UTR-P-wetherbeei_contig8635:1006..10271683187051.2033322-UTR-P-wetherbeei_contig8635:1006..1027Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8635 1007..1027 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8635.1.1prot_P-wetherbeei_contig8635.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8635 146..1006 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8635.1.1

>prot_P-wetherbeei_contig8635.1.1 ID=prot_P-wetherbeei_contig8635.1.1|Name=mRNA_P-wetherbeei_contig8635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp
MRTRDVDGAWARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLT
LFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGH
NISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHG
YTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARD
SPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDT
VKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYKDP
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mRNA from alignment at P-wetherbeei_contig8635:146..1027-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8635.1.1 ID=mRNA_P-wetherbeei_contig8635.1.1|Name=mRNA_P-wetherbeei_contig8635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig8635:146..1027- (Phaeothamnion wetherbeei SAG_119_79)
CGCCTGTGCACCCGTGACATCATGCGGACTCGAGATGTCGACGGAGCGTG GGCTCGCGCCCCGGCGACGGCGCCAGACCCTTCCACGCGCTGCTTCTTTT CGCCCCACGATATTGACGGGGCGCGGCCCATGACGCTTCACCGAAACATG GTCAACAAGCCGGATTTGACCCTTTTCCACGACGACATTGAGGGCACACG GTCCCGGCGCCACTTCGTCCACAAGTCCCGTCGGCACGTCGACCCGCTGG AGCCGGACTACCCGCTGCCGTCCTACCAGCTGGCGCCGGCCCCGGAACCC AAGTTTATACGCGATGGCCACAACATTTCCGACATTGAAGGCGCCGTGCC AAGGCCGCTGTATCCGCGCAATCCGCCGCGCGACTCTCACTCCGTCGGCG ACGTCGTCGGCGCCTCGGTCGGCTGGAAGCCGCGTTACGCCCGCGCGCGG CTGGAGGCGCCGCCGCACGGATACACACTTGACGTGCGAGACATCACCGG CGCGGCATTTCGCACCGGCCGCCACACGGACACCATGGCCCCGAGCTACA CCGTCTACGGCATGCACATTGCCGACGACCCCGAGCGGAGCCGCCCGCGC CGCCTACCGCGCGCACGGGACTCGCCGTTCTACCCGCTCACGACGGCCGA CATTGAGGGTGCCCAACCGGGCTGGAAGCCGCCGATGCTGCTGAACCCGC CGCTGGAAAGCCGACGGCAGTTTCACAATACCAACTACGTGGGCGATATT GAGGGCGCGCAGCCCGACACGGTGAAGCATGCCATGCGGACACAGCGCCG TGTCAATCCGCTCTGCCCTGTCTATGTCGGCTTGGGCGGTGAAAAGCTCG AGCCCCCGCAGAGTCCGCGCTACAAGGACCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8635:146..1027-

>mRNA_P-wetherbeei_contig8635.1.1 ID=mRNA_P-wetherbeei_contig8635.1.1|Name=mRNA_P-wetherbeei_contig8635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig8635:146..1027- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGACTCGAGATGTCGACGGAGCGTGGGCTCGCGCCCCGGCGACGGC
GCCAGACCCTTCCACGCGCTGCTTCTTTTCGCCCCACGATATTGACGGGG
CGCGGCCCATGACGCTTCACCGAAACATGGTCAACAAGCCGGATTTGACC
CTTTTCCACGACGACATTGAGGGCACACGGTCCCGGCGCCACTTCGTCCA
CAAGTCCCGTCGGCACGTCGACCCGCTGGAGCCGGACTACCCGCTGCCGT
CCTACCAGCTGGCGCCGGCCCCGGAACCCAAGTTTATACGCGATGGCCAC
AACATTTCCGACATTGAAGGCGCCGTGCCAAGGCCGCTGTATCCGCGCAA
TCCGCCGCGCGACTCTCACTCCGTCGGCGACGTCGTCGGCGCCTCGGTCG
GCTGGAAGCCGCGTTACGCCCGCGCGCGGCTGGAGGCGCCGCCGCACGGA
TACACACTTGACGTGCGAGACATCACCGGCGCGGCATTTCGCACCGGCCG
CCACACGGACACCATGGCCCCGAGCTACACCGTCTACGGCATGCACATTG
CCGACGACCCCGAGCGGAGCCGCCCGCGCCGCCTACCGCGCGCACGGGAC
TCGCCGTTCTACCCGCTCACGACGGCCGACATTGAGGGTGCCCAACCGGG
CTGGAAGCCGCCGATGCTGCTGAACCCGCCGCTGGAAAGCCGACGGCAGT
TTCACAATACCAACTACGTGGGCGATATTGAGGGCGCGCAGCCCGACACG
GTGAAGCATGCCATGCGGACACAGCGCCGTGTCAATCCGCTCTGCCCTGT
CTATGTCGGCTTGGGCGGTGAAAAGCTCGAGCCCCCGCAGAGTCCGCGCT
ACAAGGACCCC
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