mRNA_P-wetherbeei_contig130.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig130.6.1
Unique NamemRNA_P-wetherbeei_contig130.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: D7FTI7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI7_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.570e-54
Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 2 
Query:   29 SVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            +V VEIFAAGDG NYP++GQ V +HYT +LE+GTQFDSSR RGKPF+F+LG EQVVPGLDDGV+Q+S+GERAKV IPA+ AYG +GFPGLVPP+S LVFD+ELI  N
Sbjct:    5 AVSVEIFAAGDGINYPQKGQTVTVHYTGYLEDGTQFDSSRNRGKPFKFKLGSEQVVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 111
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: A0A836CL56_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL56_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.090e-54
Identity = 78/106 (73.58%), Postives = 92/106 (86.79%), Query Frame = 2 
Query:   32 VQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            V VEI  AGDG NYPR+GQ V +HYTA+L++GTQFDSSRERGKPF+F+LG EQVVPGLD+G AQ+S+GERAK+ +P SMAYG KGFPGLVPPNS LVFD+ELI  +
Sbjct:    3 VTVEILVAGDGVNYPRKGQMVTVHYTAYLDDGTQFDSSRERGKPFKFKLGSEQVVPGLDEGAAQLSIGERAKITMPPSMAYGAKGFPGLVPPNSTLVFDMELITFS 108
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: A0A6U1QP22_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QP22_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.760e-51
Identity = 74/108 (68.52%), Postives = 91/108 (84.26%), Query Frame = 2 
Query:   26 GSVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            G V+VEIFAAGDG NYP+ G+ V +HYT FL +GTQFDSSR+RGKPF+F+LG EQV+ GLD+GV+Q+S+GERAK+ IP+   YGE+GFPGLVPPNS LVFD+ELI   
Sbjct:    6 GEVKVEIFAAGDGINYPQPGKTVTVHYTGFLPDGTQFDSSRDRGKPFKFKLGAEQVISGLDEGVSQLSIGERAKITIPSQKGYGERGFPGLVPPNSQLVFDLELITFT 113
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: A0A7S2C1G0_9STRA (Peptidylprolyl isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1G0_9STRA)

HSP 1 Score: 165 bits (418), Expect = 7.130e-51
Identity = 75/110 (68.18%), Postives = 92/110 (83.64%), Query Frame = 2 
Query:   20 PIGSVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            P   V VEIFAAGDG NYPR+GQ V +HYT +L +G  FDSSR+RGKPF+F+LG EQV+ GLD GV+Q+S+GERAK+ IPA++AYGE+GFPGLVPP+S LVFD+ELI  N
Sbjct:    2 PRHDVAVEIFAAGDGINYPRKGQTVTVHYTGYLPDGDTFDSSRDRGKPFKFKLGAEQVILGLDQGVSQLSIGERAKISIPAALAYGERGFPGLVPPDSELVFDLELITFN 111
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: F0YHE6_AURAN (Peptidylprolyl isomerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHE6_AURAN)

HSP 1 Score: 164 bits (414), Expect = 2.990e-50
Identity = 71/106 (66.98%), Postives = 90/106 (84.91%), Query Frame = 2 
Query:   32 VQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            + VEIFAAGDG NYPR+GQ V +HY+ +L +G  FDSSR+RGKPF+F+LG EQV+PGLD GV+Q+S+GERAK+VIP  MAYG++GFPGL+P NS L+FD+ELI  N
Sbjct:    7 IAVEIFAAGDGVNYPRKGQTVTVHYSGYLPSGDMFDSSRDRGKPFKFKLGGEQVIPGLDAGVSQLSIGERAKIVIPPDMAYGDRGFPGLIPRNSALIFDLELITFN 112
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: A0A8J2T2V8_9STRA (Peptidylprolyl isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2V8_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.260e-49
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 2 
Query:   32 VQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            + VEIFAAGDG NYPR+GQ V +HY+ +L NG  FDSSR+RGKPF+F+LG EQV+PGLD GV+Q+S+GERAK+ IP+ MAYGE+GFPGL+P NS LVFD+ELI  +
Sbjct:    8 IAVEIFAAGDGVNYPRQGQTVTVHYSGYLPNGEIFDSSRDRGKPFKFKLGGEQVIPGLDAGVSQLSIGERAKISIPSDMAYGERGFPGLIPRNSALVFDLELITFS 113
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: A0A485LR83_9STRA (Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LR83_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.680e-49
Identity = 71/108 (65.74%), Postives = 90/108 (83.33%), Query Frame = 2 
Query:   26 GSVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            G VQVE+F AGDG NYP++GQ V +HYTA+L++G +FDSSR+R KPF+F+LG EQV+PGLD+G+ Q+ + ERAK+ IPA  AYG+KGFPGLVPPN+ LVFDIELI   
Sbjct:   19 GEVQVEVFVAGDGVNYPKKGQTVVVHYTAYLQDGKKFDSSRDRDKPFKFKLGAEQVIPGLDEGIEQLCMKERAKIYIPADKAYGKKGFPGLVPPNTNLVFDIELITFK 126
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: A0A024TRW9_9STRA (Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TRW9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 8.940e-48
Identity = 68/108 (62.96%), Postives = 90/108 (83.33%), Query Frame = 2 
Query:   26 GSVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            G +QVE+F AGDG NYP++GQ V +HYTA+L++G +FDSSR+R KPF+F+LG EQV+PGLD+G+ ++ + ERAK+ IP+  AYG+KGFPGLVPPN+ LVFDIELI   
Sbjct:   19 GEIQVEVFVAGDGINYPQKGQTVVVHYTAYLQDGKKFDSSRDRDKPFKFKLGAEQVIPGLDEGIERLCMKERAKIYIPSDKAYGKKGFPGLVPPNTNLVFDIELITFK 126
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: A0A3R7ACY2_9STRA (Peptidylprolyl isomerase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ACY2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.940e-47
Identity = 69/108 (63.89%), Postives = 90/108 (83.33%), Query Frame = 2 
Query:   26 GSVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            G +QVE+F AGDG NYP++GQ V +HYTA+L++G +FDSSR+R KPF+F+LG EQV+PGLD+G+ ++ + ERAKV IP+  AYG+KGFPGLVPPN+ LVFDIELI   
Sbjct:   78 GEIQVEVFVAGDGVNYPKKGQTVVVHYTAYLQDGKKFDSSRDRDKPFKFKLGAEQVIPGLDEGIERLCMKERAKVYIPSDKAYGKKGFPGLVPPNTNLVFDIELITFK 185
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BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Match: K3WSB6_GLOUD (Peptidylprolyl isomerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSB6_GLOUD)

HSP 1 Score: 156 bits (395), Expect = 3.110e-47
Identity = 67/108 (62.04%), Postives = 88/108 (81.48%), Query Frame = 2 
Query:   26 GSVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRERGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLVPPNSILVFDIELIAIN 349
            G +QVE+F AGDG NYP++GQ V +HYT +L++G +FDSSR+R KPF+F+LG EQV+PGLD+GV ++ + ERAK+ IPA  AYG KGFPGLVPPNS L+FD+EL+   
Sbjct:   14 GDIQVEVFIAGDGINYPKKGQTVVVHYTGYLQDGRKFDSSRDREKPFKFKLGAEQVIPGLDEGVERLCMKERAKIFIPADKAYGRKGFPGLVPPNSNLIFDLELLTFR 121
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig130.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTI7_ECTSI1.570e-5473.83Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A836CL56_9STRA4.090e-5473.58Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A6U1QP22_9STRA3.760e-5168.52Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2C1G0_9STRA7.130e-5168.18Peptidylprolyl isomerase n=1 Tax=Florenciella parv... [more]
F0YHE6_AURAN2.990e-5066.98Peptidylprolyl isomerase n=1 Tax=Aureococcus anoph... [more]
A0A8J2T2V8_9STRA1.260e-4967.92Peptidylprolyl isomerase n=1 Tax=Pelagomonas calce... [more]
A0A485LR83_9STRA2.680e-4965.74Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID... [more]
A0A024TRW9_9STRA8.940e-4862.96Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID... [more]
A0A3R7ACY2_9STRA1.940e-4763.89Peptidylprolyl isomerase n=3 Tax=Aphanomyces astac... [more]
K3WSB6_GLOUD3.110e-4762.04Peptidylprolyl isomerase n=1 Tax=Globisporangium u... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig130contigP-wetherbeei_contig130:4928..5648 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTI7
PFAMsFKBP_C,MtN3_slv
Model size352
Max annot lvl2759|Eukaryota
KEGG koko:K09568,ko:K15382
KEGG TC9.A.58.1
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.57e-55
EggNOG OGsCOG0545@1|root,KOG0544@2759|Eukaryota
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-21_001540.1
EC5.2.1.8
DescriptionPeptidyl-prolyl cis-trans isomerase
Cds size351
COG categoryO
BRITEko00000,ko01000,ko02000,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185970.05686-UTR-P-wetherbeei_contig130:4927..49281683185970.05686-UTR-P-wetherbeei_contig130:4927..4928Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig130 4928..4928 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185970.079031-CDS-P-wetherbeei_contig130:4928..50151683185970.079031-CDS-P-wetherbeei_contig130:4928..5015Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig130 4929..5015 +
1683185970.089913-CDS-P-wetherbeei_contig130:5124..52261683185970.089913-CDS-P-wetherbeei_contig130:5124..5226Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig130 5125..5226 +
1683185970.0997777-CDS-P-wetherbeei_contig130:5486..56481683185970.0997777-CDS-P-wetherbeei_contig130:5486..5648Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig130 5487..5648 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig130.6.1prot_P-wetherbeei_contig130.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig130 4929..5648 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig130.6.1

>prot_P-wetherbeei_contig130.6.1 ID=prot_P-wetherbeei_contig130.6.1|Name=mRNA_P-wetherbeei_contig130.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp
MAATRKPIGSVQVEIFAAGDGKNYPRRGQYVEIHYTAFLENGTQFDSSRE
RGKPFRFRLGCEQVVPGLDDGVAQISVGERAKVVIPASMAYGEKGFPGLV
PPNSILVFDIELIAIN*
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mRNA from alignment at P-wetherbeei_contig130:4928..5648+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig130.6.1 ID=mRNA_P-wetherbeei_contig130.6.1|Name=mRNA_P-wetherbeei_contig130.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=721bp|location=Sequence derived from alignment at P-wetherbeei_contig130:4928..5648+ (Phaeothamnion wetherbeei SAG_119_79)
CATGGCTGCCACGAGAAAACCCATCGGCAGCGTGCAGGTCGAAATCTTTG
CCGCCGGCGACGGCAAAAACTACCCAAGACGAGGCCAGGTGAGCGTATGG
CGACGTCCTTTCTGTTTCTCTCTCCTTCGCTCAAGCCTTTGCACCAACCA
CATGCTCACGCTTTTCGCTTCATGCACCCTTTCCCTTCCTGTCGCAGTAC
GTCGAGATCCATTATACTGCCTTCCTCGAAAACGGCACGCAGTTCGACTC
GTCCAGAGAACGGGGGAAACCCTTTCGATTTCGCCTCGGCTGTGAACAGG
TGCGATTAGCAGTTTTTCGCTACATGTCGCACTGCCTTTCGATGAGTTTT
GAAAGGGTTCAGCTATCGAGAGCCGGGTTCGTTATTGTGTGGTACATGCG
TGGAATTCATTACCTTCATCTTGCCATCGAAGCTGTTCCCCGAACCCCTC
AACCAATCCGGCGCCCCTCTCGAATTCTGCGCCCCTTTCATCAAAAATCT
CCCAGAAACGTGATGTCCGCAAGCGAACGCCCCCCTTTTTTCTTTTTTTC
CCTCCCCAGGTGGTACCGGGGCTGGATGACGGCGTCGCCCAGATCAGCGT
GGGGGAGCGGGCCAAGGTGGTCATCCCCGCGTCAATGGCCTACGGGGAGA
AGGGCTTCCCAGGGCTGGTCCCGCCCAACTCAATTCTAGTGTTTGATATC
GAGCTCATTGCCATCAATTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig130:4928..5648+

>mRNA_P-wetherbeei_contig130.6.1 ID=mRNA_P-wetherbeei_contig130.6.1|Name=mRNA_P-wetherbeei_contig130.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig130:4928..5648+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGCCACGAGAAAACCCATCGGCAGCGTGCAGGTCGAAATCTTTGC
CGCCGGCGACGGCAAAAACTACCCAAGACGAGGCCAGTACGTCGAGATCC
ATTATACTGCCTTCCTCGAAAACGGCACGCAGTTCGACTCGTCCAGAGAA
CGGGGGAAACCCTTTCGATTTCGCCTCGGCTGTGAACAGGTGGTACCGGG
GCTGGATGACGGCGTCGCCCAGATCAGCGTGGGGGAGCGGGCCAAGGTGG
TCATCCCCGCGTCAATGGCCTACGGGGAGAAGGGCTTCCCAGGGCTGGTC
CCGCCCAACTCAATTCTAGTGTTTGATATCGAGCTCATTGCCATCAATTA
G
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