prot_P-wetherbeei_contig8625.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8625.1.1
Unique Nameprot_P-wetherbeei_contig8625.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length138
Homology
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A3C0TYR5_9PROT (Flagellar basal-body rod protein FlgC n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYR5_9PROT)

HSP 1 Score: 216 bits (551), Expect = 2.060e-70
Identity = 106/137 (77.37%), Postives = 127/137 (92.70%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLLNTR 137
            MDLK++IETS+SGM+SQ TRMRIIAEN+ANAQST++ P G+PYRRRVV+F+NELDRA+GAKLVKVK VE DK+ FET ++P+HPAAD +GY+K+PNVNS IETMDM QAQRSYEANLAAIKA+QNMM+RTIDLLN+R
Sbjct:    1 MDLKASIETSVSGMSSQATRMRIIAENLANAQSTSQTPGGDPYRRRVVTFSNELDRANGAKLVKVKSVEPDKSNFETQFNPNHPAADENGYIKLPNVNSTIETMDMNQAQRSYEANLAAIKAAQNMMIRTIDLLNSR 137          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A352KGW2_9PROT (Flagellar basal-body rod protein FlgC n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KGW2_9PROT)

HSP 1 Score: 189 bits (479), Expect = 1.920e-59
Identity = 92/137 (67.15%), Postives = 115/137 (83.94%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLLNTR 137
            MDL  AI+TS SGM +Q TRMR+I+ENIAN+QS A+ PD +PYRR++V+F NELDR SGAKLV V+ V  DK+EF+  YDP HPAA+  GYV +PNVN ++ETMDMQQAQRSYEAN+A++KA+QNM+V+TIDLLN R
Sbjct:    1 MDLNLAIQTSASGMRAQSTRMRVISENIANSQSLAKNPDEDPYRRQMVTFRNELDRVSGAKLVNVRKVVEDKSEFKQKYDPLHPAANPQGYVDLPNVNVVLETMDMQQAQRSYEANIASLKAAQNMLVKTIDLLNNR 137          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A4Q3AEX4_9SPHN (Flagellar basal-body rod protein FlgC n=4 Tax=Sphingomonadales TaxID=204457 RepID=A0A4Q3AEX4_9SPHN)

HSP 1 Score: 166 bits (420), Expect = 1.720e-50
Identity = 80/134 (59.70%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLL 134
            MDLKSA+  S SG+ +Q  RMR+IAEN+AN  S ++ P G+PYRRRV +F  E+DRA+GA  V VKGV  DK+ F+ +Y P +PAAD+ GYV MPNVN L+ET D++ AQRSYEANL+AI+A++ M +RTIDLL
Sbjct:    1 MDLKSAVSVSASGLRAQSLRMRVIAENLANQSSVSQTPGGDPYRRRVATFAAEVDRATGATKVSVKGVATDKSAFQRVYQPGNPAADARGYVNMPNVNGLVETADLKAAQRSYEANLSAIEAAKGMTMRTIDLL 134          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A4P6FJ96_9SPHN (Flagellar basal-body rod protein FlgC n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A4P6FJ96_9SPHN)

HSP 1 Score: 165 bits (417), Expect = 4.920e-50
Identity = 80/134 (59.70%), Postives = 106/134 (79.10%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLL 134
            MDLK+++E S SG+ +Q  RMRIIAEN+ANA S A  P G+PYRRRV +F +E+DRASGA+ V V+ +E DK  F+ +Y P +PAAD++GYV  PNVNSL+E+ DM+ AQR+YEANL AI+A++ M +RTIDLL
Sbjct:    1 MDLKNSVEVSASGLRAQSLRMRIIAENLANADSVATTPGGQPYRRRVATFESEVDRASGAQGVNVRSIEGDKTAFQRVYQPGNPAADATGYVLRPNVNSLVESADMKAAQRAYEANLNAIEAAKGMTMRTIDLL 134          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A2K8MN00_9SPHN (Flagellar basal-body rod protein FlgC n=6 Tax=Sphingomonas TaxID=13687 RepID=A0A2K8MN00_9SPHN)

HSP 1 Score: 165 bits (417), Expect = 4.920e-50
Identity = 79/134 (58.96%), Postives = 105/134 (78.36%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLL 134
            MDLK+++  S SG+ +Q  RMR+IAEN+AN  S A+ P G+PYRRR+ SF  E+DRA+GA  VKV+G+END+++F  IY P HPAAD  GYV  PNVN L+E+ DM+ AQRSYEANL AI+A++++ +RTIDLL
Sbjct:    1 MDLKASLGVSASGLRAQSLRMRVIAENLANQDSVAQTPGGDPYRRRIASFKAEVDRATGATEVKVQGIENDRSDFTRIYQPGHPAADGEGYVLKPNVNGLVESADMKAAQRSYEANLNAIEAAKSLTMRTIDLL 134          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A245ZTR9_9SPHN (Flagellar basal-body rod protein FlgC n=3 Tax=Sphingomonas TaxID=13687 RepID=A0A245ZTR9_9SPHN)

HSP 1 Score: 164 bits (416), Expect = 6.990e-50
Identity = 80/134 (59.70%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLL 134
            MDLK++++ S +G+ +Q  RMRIIAEN+AN+ S A  P G+PYRRRVVSF +E+DRASG   V VKG++ DKA F+  Y P  PAAD+ GYV  PNVN L+ET DM+ AQRSYEANL+AI+A++ + +RTIDLL
Sbjct:    1 MDLKTSVQVSATGLRAQSLRMRIIAENLANSDSIAAAPGGDPYRRRVVSFRSEVDRASGGMGVSVKGIDGDKAAFQRTYQPGSPAADAQGYVLRPNVNGLVETADMKAAQRSYEANLSAIEAAKGLTMRTIDLL 134          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A4Y8ZWQ9_9SPHN (Flagellar basal-body rod protein FlgC n=1 Tax=Sphingomonas parva TaxID=2555898 RepID=A0A4Y8ZWQ9_9SPHN)

HSP 1 Score: 164 bits (416), Expect = 6.990e-50
Identity = 77/134 (57.46%), Postives = 110/134 (82.09%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLL 134
            MDLK+++E S SG+ +Q  RMR+IAEN+ANA S A  P G+PYRR+V SF +E+DRA+GA+ V+V+G+E D++ F+ +Y P +PAAD++GYV  PNVNSL+E+ DM+ AQR+YEANL+AI+A++ + +RTIDLL
Sbjct:    1 MDLKNSVEVSASGLRAQSLRMRVIAENLANADSVATTPGGQPYRRKVASFESEVDRATGAEGVRVRGIEADQSAFQRVYQPGNPAADAAGYVLKPNVNSLVESADMKAAQRAYEANLSAIEAAKGLTMRTIDLL 134          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A1L6J9I1_9SPHN (Flagellar basal-body rod protein FlgC n=4 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A1L6J9I1_9SPHN)

HSP 1 Score: 164 bits (415), Expect = 9.920e-50
Identity = 79/134 (58.96%), Postives = 107/134 (79.85%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLL 134
            MDL S+I  S SG+ +Q  RMR+IAEN+AN+ S A  P G+PYRRRV +F +E+DRA+GA  V V+ +E DK++F+ +Y+P +PAAD++GYV+ PNVNSLIET DM+ AQRSYEANL AI++++ M +RTIDLL
Sbjct:    1 MDLDSSIGVSASGLRAQSLRMRVIAENLANSDSVATRPGGDPYRRRVATFKSEVDRATGATRVSVRSIEGDKSQFQRVYEPGNPAADAAGYVQRPNVNSLIETADMKAAQRSYEANLNAIESARGMTMRTIDLL 134          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A2G2LGL2_9PROT (Flagellar basal-body rod protein FlgC n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2LGL2_9PROT)

HSP 1 Score: 164 bits (415), Expect = 1.090e-49
Identity = 76/136 (55.88%), Postives = 108/136 (79.41%), Query Frame = 0
Query:    2 DLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLLNTR 137
            D+ SA++ + +GM +Q  RMR+IAEN+ANA STA GPDG+PYRR+V  FT ELDRA+G +LV++     D ++F ++YDP HPAAD+ G+VK PNVNS+IE MDM++AQR++EAN++ I+ S+ MM RT++LL +R
Sbjct:    3 DMSSALKIAAAGMRAQSARMRVIAENVANAGSTATGPDGQPYRRKVPIFTEELDRATGTRLVRMSKAMPDPSKFRSVYDPGHPAADAKGFVKYPNVNSMIEMMDMREAQRTFEANISVIENSRAMMSRTLELLRSR 138          
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Match: A0A7W9AGW2_9SPHN (Flagellar basal-body rod protein FlgC n=1 Tax=Sphingobium boeckii TaxID=1082345 RepID=A0A7W9AGW2_9SPHN)

HSP 1 Score: 163 bits (413), Expect = 2.000e-49
Identity = 78/134 (58.21%), Postives = 105/134 (78.36%), Query Frame = 0
Query:    1 MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSFTNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSLIETMDMQQAQRSYEANLAAIKASQNMMVRTIDLL 134
            M+L+S+I+ S SG+ +Q  RMR+IAEN+AN  S AR P G+PYRRRV +F  E+DRA+GA  V VK +E DK+ F+++Y P +PAAD+ GYV+ PNVNSLIE  DM+ AQRSYEAN+ AI+A++ + +RTIDLL
Sbjct:    1 MELQSSIDVSASGLRAQSLRMRVIAENLANTDSVARTPGGDPYRRRVATFKTEVDRATGANSVAVKSIEGDKSAFQSVYQPGNPAADAQGYVQRPNVNSLIEAADMKAAQRSYEANINAIEAARGLTMRTIDLL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8625.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TYR5_9PROT2.060e-7077.37Flagellar basal-body rod protein FlgC n=1 Tax=Alph... [more]
A0A352KGW2_9PROT1.920e-5967.15Flagellar basal-body rod protein FlgC n=2 Tax=Alph... [more]
A0A4Q3AEX4_9SPHN1.720e-5059.70Flagellar basal-body rod protein FlgC n=4 Tax=Sphi... [more]
A0A4P6FJ96_9SPHN4.920e-5059.70Flagellar basal-body rod protein FlgC n=2 Tax=Sphi... [more]
A0A2K8MN00_9SPHN4.920e-5058.96Flagellar basal-body rod protein FlgC n=6 Tax=Sphi... [more]
A0A245ZTR9_9SPHN6.990e-5059.70Flagellar basal-body rod protein FlgC n=3 Tax=Sphi... [more]
A0A4Y8ZWQ9_9SPHN6.990e-5057.46Flagellar basal-body rod protein FlgC n=1 Tax=Sphi... [more]
A0A1L6J9I1_9SPHN9.920e-5058.96Flagellar basal-body rod protein FlgC n=4 Tax=Sphi... [more]
A0A2G2LGL2_9PROT1.090e-4955.88Flagellar basal-body rod protein FlgC n=2 Tax=Robi... [more]
A0A7W9AGW2_9SPHN2.000e-4958.21Flagellar basal-body rod protein FlgC n=1 Tax=Sphi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010930Flagellar basal-body/hook protein, C-terminal domainPFAMPF06429Flg_bbr_Ccoord: 88..132
e-value: 1.0E-9
score: 38.4
IPR001444Flagellar basal body rod protein, N-terminalPFAMPF00460Flg_bb_rodcoord: 7..34
e-value: 1.9E-4
score: 21.3
IPR006299Flagellar basal-body rod protein FlgCTIGRFAMTIGR01395TIGR01395coord: 6..134
e-value: 3.4E-42
score: 141.9
NoneNo IPR availablePANTHERPTHR30435FLAGELLAR PROTEINcoord: 1..134
NoneNo IPR availablePANTHERPTHR30435:SF2FLAGELLAR BASAL-BODY ROD PROTEIN FLGCcoord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8625contigP-wetherbeei_contig8625:206..619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8625.1.1mRNA_P-wetherbeei_contig8625.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8625 206..619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8625.1.1 ID=prot_P-wetherbeei_contig8625.1.1|Name=mRNA_P-wetherbeei_contig8625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp
MDLKSAIETSISGMNSQGTRMRIIAENIANAQSTARGPDGEPYRRRVVSF
TNELDRASGAKLVKVKGVENDKAEFETIYDPSHPAADSSGYVKMPNVNSL
IETMDMQQAQRSYEANLAAIKASQNMMVRTIDLLNTR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010930Flg_bb/hook_C_dom
IPR001444Flag_bb_rod_N
IPR006299FlgC