prot_P-wetherbeei_contig844.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig844.1.1
Unique Nameprot_P-wetherbeei_contig844.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length128
Homology
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BLAST of mRNA_P-wetherbeei_contig844.1.1 vs. uniprot
Match: W7TNM2_9STRA (VASt domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNM2_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.510e-7
Identity = 39/130 (30.00%), Postives = 61/130 (46.92%), Query Frame = 0 
Query:    1 LDLKIPG-SPSRFL-ALLHDIAFQSAVHDDGKDLDVRLTPWALGEGEEEVVLEVASFTPASVPVAAFRTLVFRHPVRTKFPGLPSHAVTEKKQ---EYRVHDSSCSSITLLEHTSVSNIPYGDYFTVHTV 125
            LDL +P  +P  +L +  HD +F      +  D DV + PW+  +     V      T  +      RT+V +HPV+ K PG+PSH  + K Q   E +++ +    I + E   V  +P+ D F V  V
Sbjct:  137 LDLNLPSITPDEYLESFWHDTSFYENFLKESGDRDVSIQPWSPAQPSTHSVAH-HKMTHRT------RTIVTKHPVKAKMPGIPSHVRSTKTQVLSEEKINRNGSVIIRVHETNEVEGVPFADRFLVAVV 259
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BLAST of mRNA_P-wetherbeei_contig844.1.1 vs. uniprot
Match: A0A4D9D5L1_9STRA (VASt domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5L1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.510e-6
Identity = 39/130 (30.00%), Postives = 60/130 (46.15%), Query Frame = 0 
Query:    1 LDLKIPG-SPSRFL-ALLHDIAFQSAVHDDGKDLDVRLTPWALGEGEEEVVLEVASFTPASVPVAAFRTLVFRHPVRTKFPGLPSHAVTEKKQ---EYRVHDSSCSSITLLEHTSVSNIPYGDYFTVHTV 125
            LDL +P  +P  +L +  HD  F      +  D DV +  W+  +     V      T  +      RT+V +HPV+TK PG+PSH  + K Q   E +++ +    I + E   V  +P+ D F V  V
Sbjct:   38 LDLNLPSITPDEYLKSFWHDTTFYENFLKESGDRDVSVKSWSPAQPSTHSVAH-HKITHRT------RTIVTKHPVKTKMPGIPSHVRSTKTQVLSEEKINRNGSVIIRVHETNEVEGVPFADRFLVAVV 160
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig844.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
W7TNM2_9STRA8.510e-730.00VASt domain-containing protein n=1 Tax=Nannochloro... [more]
A0A4D9D5L1_9STRA3.510e-630.00VASt domain-containing protein n=1 Tax=Nannochloro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031968VASt domainPFAMPF16016VAStcoord: 5..124
e-value: 3.0E-10
score: 40.8
IPR031968VASt domainPROSITEPS51778VASTcoord: 1..127
score: 13.517092

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig844contigP-wetherbeei_contig844:55..438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig844.1.1mRNA_P-wetherbeei_contig844.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig844 55..438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig844.1.1 ID=prot_P-wetherbeei_contig844.1.1|Name=mRNA_P-wetherbeei_contig844.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp
LDLKIPGSPSRFLALLHDIAFQSAVHDDGKDLDVRLTPWALGEGEEEVVL
EVASFTPASVPVAAFRTLVFRHPVRTKFPGLPSHAVTEKKQEYRVHDSSC
SSITLLEHTSVSNIPYGDYFTVHTVSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt