mRNA_P-wetherbeei_contig1023.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: D7FKR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR9_ECTSI) HSP 1 Score: 332 bits (850), Expect = 7.940e-110 Identity = 180/254 (70.87%), Postives = 208/254 (81.89%), Query Frame = 1 Query: 1 TPPAMERNLFLSALANGKLAAAESDAILTAKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAH---GKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 TPPAMERNLFLSALANGKL D ++T KR++AGGLAGMLAKSVVAPVDRIKILFQVTNERFSF ++L + I+ LEG +GLW+GNSATMIRVFPYAGTQFM+FD+LKR LLRK + P+ QRLSN ESL++GS+AGA SA VTYPLDLARARLAV A G+RR GV LL +V+++DG +ALY GVTPSL+G+IPYAGIAFSINE AKH+V V++G EP T HKLGIGA A LIAQSCTYPL Sbjct: 83 TPPAMERNLFLSALANGKLEHHRDDVVITLKRVVAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFKKAEKLFQDILALEGPAGLWKGNSATMIRVFPYAGTQFMMFDSLKRWALLRKTRRDPNAEQRLSNTESLMSGSLAGATSALVTYPLDLARARLAVGHARKLGGRRR--SMGVQELLQTVVRQDGFKALYRGVTPSLLGIIPYAGIAFSINEQAKHKVAVLTGKEPGTFHKLGIGALAGLIAQSCTYPL 334
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A835ZCX0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX0_9STRA) HSP 1 Score: 307 bits (786), Expect = 5.080e-99 Identity = 165/248 (66.53%), Postives = 191/248 (77.02%), Query Frame = 1 Query: 1 TPPAMERNLFLSALANGKLAAAESDAILTAKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVA---HGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQ 735 TPPAMERNLFLSALANG LA D ++T KR+ AGGLAGMLAKS VAPVDRIKILFQVTNE FSF V+ + R I++LEG GLWRGNSATMIRVFPYAGTQFM+FDTLKR IL ++ RL N ESL+ GS+AG +SAFVTYPLDLARAR+AV HG + P GV L +++K DG RALY GVTPSL+G+IPYAGIAF+INE KHEVRV++G EP T+HKL IGAFA L+ + Sbjct: 205 TPPAMERNLFLSALANGTLAHHRDDVVVTVKRVFAGGLAGMLAKSFVAPVDRIKILFQVTNEAFSFRKVKVMGRRIVDLEGIGGLWRGNSATMIRVFPYAGTQFMMFDTLKRFILSKRNDPEHSHATRLKNVESLMCGSIAGGISAFVTYPLDLARARMAVSSVSRPHGLKHRRP-GVLKTLEALVKDDGARALYRGVTPSLVGIIPYAGIAFTINEHLKHEVRVITGLEPATVHKLLIGAFAGLVFE 451
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A4D9D1I9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1I9_9STRA) HSP 1 Score: 219 bits (558), Expect = 9.280e-66 Identity = 134/274 (48.91%), Postives = 162/274 (59.12%), Query Frame = 1 Query: 73 DAILTAKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGK---RRYEPRG--------------------------------------------VASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 +AI TAK I+AGGLAGM+AKSVVAPVDRIKILFQV++E F V + R I EG GLW+GNSATM+RVFPYAG QFM FDT+K IL + +L+N ESL AGS AG VS TYPLD ARARLAVE A G RR+ P G V + + + G +LY GVTP+L+G++PYAGIAF+IN+ A H++ ++G EP+TL KLG GAFA L AQS TYPL Sbjct: 45 NAISTAKSIMAGGLAGMVAKSVVAPVDRIKILFQVSSEEFCLRKVLFIMRRIYHEEGFGGLWKGNSATMLRVFPYAGIQFMTFDTVKAYILKMNGEVEGG---QLTNLESLFAGSFAGFVSCTCTYPLDFARARLAVEGAQGAQYLRRHMPAGGRGVGVERASTSSVSHALQDGEKAGGKLGSKRVLANGAGRAHHTVLDVFKAAYREGGILSLYRGVTPTLLGILPYAGIAFTINDKANHQIHRLTGEEPSTLQKLGCGAFAGLAAQSATYPL 315
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7R9WEJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEJ9_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.430e-60 Identity = 112/240 (46.67%), Postives = 156/240 (65.00%), Query Frame = 1 Query: 91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQR---------------LSNYESLVAGSVAGAVSAFVTYPLDLARARLAV----EVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 + +LAGG+AGM+AK+ VAP+DRIKIL+Q+++ F V +A I++ EG + LW+GN TMIRVFPY+G QFMVFD +K + R + H L LS ESLV+GS+AGAVS TYPLDL RA+LAV A GK+ Y+ ++ + K+ G + LY G+TP+L+G++PY+GIAF+INE K +++ ++G EPTT+ K+ GA + LIAQS TYPL Sbjct: 37 RNLLAGGIAGMVAKTFVAPIDRIKILYQISSAHFRLRDVPGVAFKIVKTEGITALWKGNMVTMIRVFPYSGIQFMVFDRIKMNFIRRHEHEKSHWLTETTSPHDKETKPKKWGLSPGESLVSGSLAGAVSVMCTYPLDLTRAQLAVLRKKRDASGKKIYQR--FPTVFANNYKKGGVKGLYRGITPTLLGILPYSGIAFTINEQGKRQIQHMTGREPTTVEKMQCGALSGLIAQSMTYPL 274
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S1YF97_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YF97_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.370e-59 Identity = 113/227 (49.78%), Postives = 150/227 (66.08%), Query Frame = 1 Query: 91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPH---PLQR---LSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 + +LAGG+AGM AKSVVAP+DRIKIL+QV+ + F V ++ R I++ EG + LW+GN+ATMIRVFPYAG QFMVFD K L + + R H P R LS ESL+AGS+AGA+S TYPLD+ RA+LAV H R +LG G R L+ G+TP+L+G++PY+G AF++NE K +R + EPTT+ K+ GA + LIAQ+ TYPL Sbjct: 46 RNLLAGGIAGMAAKSVVAPMDRIKILYQVSAKEFHMSDVPRMGRRIVKDEGITALWKGNTATMIRVFPYAGVQFMVFDRCKGYFLEKHERRRRHGYHPEGRAWGLSASESLIAGSLAGAISVACTYPLDMTRAQLAVMKKH--RNQHNMNFVQVLGQNYAERGVRGLFRGITPTLLGILPYSGSAFAMNEQGKRYLRHLQNHEPTTIQKMECGAVSGLIAQTLTYPL 270
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S2EJQ0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJQ0_TRICV) HSP 1 Score: 201 bits (511), Expect = 2.500e-59 Identity = 110/238 (46.22%), Postives = 157/238 (65.97%), Query Frame = 1 Query: 91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRL-------------SNYESLVAGSVAGAVSAFVTYPLDLARARLAV----EVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 + +LAGG+AGM+AK+ VAP+DRIKIL+Q+++ F V +A II EG + LW+GN+ATMIRVFPY+G QFMVFD +K L+R P +L S +ESL++G++AGAVS TYPLDL RA+LAV A G++ ++ S+L + K G + LY G+TP+L+G++PY+GIAF+INE AK ++ ++ +PTT+ K+ GA + L+AQS TYPL Sbjct: 36 RNLLAGGIAGMVAKTFVAPIDRIKILYQISSAHFRLRDVPGVAVKIIRTEGVAALWKGNTATMIRVFPYSGIQFMVFDRIKTHFLMRHKHDVPQHAPKLDSTEKVKSRKWGLSPFESLISGALAGAVSVVSTYPLDLTRAQLAVLKRKRDATGRKIHQ--SFPSVLFANYKNGGVKGLYRGITPTLLGILPYSGIAFTINEQAKRQIHHITHRDPTTVEKMQCGALSGLVAQSMTYPL 271
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S2V5Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q5_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.920e-57 Identity = 109/221 (49.32%), Postives = 148/221 (66.97%), Query Frame = 1 Query: 91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVASL-LGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYP 750 KR +AGGLAGM AK+VVAPV+R+KI+FQVTNE FS + ++++ EG GLW+G SATM+RVFPYAG QFM FD LK+ + + P LS ++ V G+ AG++S +TYPLDL R +AVE K+ Y P+ S+ L +LK +G LY G+TP++MG++PYAGIAFS+NE+ K ++ G P+T+ KL G FA L+AQS YP Sbjct: 15 KRGVAGGLAGMAAKAVVAPVERLKIMFQVTNEPFSVRHLVNGFQTVLRKEGVPGLWKGYSATMLRVFPYAGIQFMTFDYLKKTTMAMNSSECP----TLSPPQNFVCGAAAGSISILITYPLDLLRTMMAVE--RSKKTYVPKASLSMTLRIMLKEEGFLGLYRGLTPTMMGILPYAGIAFSVNEYLKEALKR-RGQPPSTVEKLMAGGFAGLLAQSAAYP 228
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S2UB48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB48_9STRA) HSP 1 Score: 192 bits (487), Expect = 6.880e-56 Identity = 108/228 (47.37%), Postives = 148/228 (64.91%), Query Frame = 1 Query: 88 AKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVAS------LLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 A+ +LAGGLAGM+AKS+VAP+DRIKI++QVT+ F V +A I++ EG S LW+GNSATMIRVFPY+G QFMVF K L + R + +S ESL+AGS AG VS TYPLDL RA+LAV ++ + G+ +L S K G + L+ G+ P+L+G++PY+GIAF+INE K +++ V +PT + K+ GA + L AQ+ TYPL Sbjct: 66 ARNLLAGGLAGMVAKSIVAPLDRIKIMYQVTSAHFRLRNVPGVASRIVKEEGFSALWKGNSATMIRVFPYSGIQFMVFHKCKTHYLNK--HDRDQRIHGISPLESLMAGSFAGVVSVICTYPLDLTRAQLAV-----LKKKKSGGIGGQHPFVYVLTSNYKNGGVKGLFRGIFPTLLGILPYSGIAFTINEQGKRKIQNVFDRDPTNIEKIQCGALSGLFAQTLTYPL 286
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A6V2HRU9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HRU9_9STRA) HSP 1 Score: 191 bits (485), Expect = 2.910e-55 Identity = 114/255 (44.71%), Postives = 155/255 (60.78%), Query Frame = 1 Query: 91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRIL-------LRKAQARPHPLQR------------------------LSNYESLVAGSVAGAVSAFVTYPLDLARARLAV---EVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 + +++GGLAGM+AKSVVAP+DRIKIL+Q+T F V +A SI + EG S LW+GN ATM+RVFPY+G QFMVFD K L LR+ RP + LS ESL++G VAG +S +TYPLDL RA+LAV E + R + +G S+L + G LY G+TP+L+G++PY+GIAF+INE AK E++ ++ EPTT+ ++ GA + L+AQS TYPL Sbjct: 30 RNLISGGLAGMVAKSVVAPIDRIKILYQITATPFHLRHVPNVAYSIAQTEGLSALWKGNFATMLRVFPYSGIQFMVFDRCKMYFLGQHELERLRRRNTRPPSTIKGKMDDDFEDEAVALLARRKTDKFGLSPLESLLSGMVAGTLSVIITYPLDLTRAQLAVLKKEKSSNTTR-KTKGFVSVLFGNYRNGGIVGLYRGITPTLLGILPYSGIAFTINEQAKREIQHLTKREPTTVERMQCGAVSGLVAQSLTYPL 283
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A448Z804_9STRA (Lysine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z804_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.510e-53 Identity = 112/231 (48.48%), Postives = 150/231 (64.94%), Query Frame = 1 Query: 91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRIL------LRKAQA----RPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753 + ILAGGLAGM+AKS VAP DRIKIL+QV++ F V +A+ II+ EG S LW+GN+AT+IRVFPY+G QFMVFD K +L R+ +A P P+ LS ESL AG AGAVS TYPLDL R++LAV R G + L S + G L+ G+TP+LMG++PY+G+AFS NE AK +++ ++G + TT+ ++ GA + L AQ+ TYPL Sbjct: 753 RNILAGGLAGMIAKSFVAPFDRIKILYQVSSAEFHIKYVPGIAKRIIQTEGLSALWKGNTATLIRVFPYSGIQFMVFDRCKTYLLKEQELNYRREKALHPDTPKPIWGLSPLESLCAGMAAGAVSVVATYPLDLTRSQLAVLKTKKGRSSSNVGFGAALLSNYRDRGAVGLFRGITPTLMGILPYSGLAFSFNEQAKRKIQNMTGRDLTTIERMQCGALSGLFAQTVTYPL 983 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1023.3.1 >prot_P-wetherbeei_contig1023.3.1 ID=prot_P-wetherbeei_contig1023.3.1|Name=mRNA_P-wetherbeei_contig1023.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MERNLFLSALANGKLAAAESDAILTAKRILAGGLAGMLAKSVVAPVDRIKback to top mRNA from alignment at P-wetherbeei_contig1023:5648..8104+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1023.3.1 ID=mRNA_P-wetherbeei_contig1023.3.1|Name=mRNA_P-wetherbeei_contig1023.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2457bp|location=Sequence derived from alignment at P-wetherbeei_contig1023:5648..8104+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1023:5648..8104+ >mRNA_P-wetherbeei_contig1023.3.1 ID=mRNA_P-wetherbeei_contig1023.3.1|Name=mRNA_P-wetherbeei_contig1023.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig1023:5648..8104+ (Phaeothamnion wetherbeei SAG_119_79)back to top |