mRNA_P-wetherbeei_contig8363.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8363.1.1
Unique NamemRNA_P-wetherbeei_contig8363.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: D8LSB4_ECTSI (Glycolate Oxidase (2-Hydroxyacid Oxidase) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB4_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.240e-106
Identity = 159/229 (69.43%), Postives = 188/229 (82.10%), Query Frame = 1
Query:    1 KVISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTANGYGDRVRDSWDQNSEKLLDATATWEDVSWLRSLTRLPLLLK 687
            + ISL+DFQ  AK  L   +YEYVASG+DDE TLSENR AFKR+FL+PRM+R VS IDL + + G   SMPV VSPAGVH+L+HP GE ATARACA  GT+MGVSQHAT+SLEDVAAAAP   RWFQLY+LKDR+LT  ILRR+E A Y AI LTVDS RFG+READWRN+FNGLP G++LANYPT +GY DRV+D+WDQN+EKL D  ATW D++WL+SLT LP+L+K
Sbjct:   14 RCISLDDFQRQAKPILGKALYEYVASGTDDEQTLSENRQAFKRMFLLPRMMRVVSDIDLRLDVFGQRLSMPVFVSPAGVHKLMHPEGECATARACAEAGTLMGVSQHATVSLEDVAAAAPRCARWFQLYILKDRELTAGILRRSEKAGYTAICLTVDSVRFGSREADWRNNFNGLPPGVTLANYPTQDGYNDRVKDAWDQNTEKLFDERATWSDIAWLKSLTSLPILVK 242          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: A0A835ZFZ5_9STRA (Glycolate oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFZ5_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.990e-92
Identity = 143/229 (62.45%), Postives = 174/229 (75.98%), Query Frame = 1
Query:    1 KVISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTANGYGDRVRDSWDQNSEKLLDATATWEDVSWLRSLTRLPLLLK 687
            K IS++DFQ  A+  +    YEYVASG++DE TL ENRAAFKR FLVPR +R+VSKID +V +LG   S+PVLVSPAGVH + HP GE   ARACA  GTIM VSQHA  +LE+VAAAA    +WFQLY+LKDR LT  I+RRA AA Y A+VLT+DSARFG READ RN F GLP GLSL NYPT  GY DR R++WDQN+E++ D T  W +++WLRS+T LP+++K
Sbjct:   13 KFISVDDFQDYARAHMDKARYEYVASGTEDEQTLQENRAAFKRFFLVPRFMRDVSKIDTAVDVLGHRASLPVLVSPAGVHNICHPQGEVGCARACARAGTIMAVSQHANSTLEEVAAAAGGAPQWFQLYILKDRALTRDIVRRAVAAGYKALVLTIDSARFGYREADARNGFVGLPEGLSLPNYPTREGYDDRDREAWDQNTERIFDTTCDWSEIAWLRSITTLPIVIK 241          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: A0A7S2V2J3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2J3_9STRA)

HSP 1 Score: 282 bits (722), Expect = 4.040e-91
Identity = 141/230 (61.30%), Postives = 174/230 (75.65%), Query Frame = 1
Query:    1 KVISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTANGYGDRVRDSWDQNSEKLLDATATWED-VSWLRSLTRLPLLLK 687
            K+ISL+DFQA AKK L   +YEYVASGSDDE TL+EN+ AFKR FL PRM++ V  +D    I G   SMPV +SP GVH+L+H  GE AT+RA A  G +MGVSQHAT SLEDVA AAP G RWFQ Y+LKDR+LT  I++RA  A Y AI+LTVDS RFG+READWRN F+GLP G SL NYP+ +GYGDR +D+WDQN+EKL DA   W++ ++ +R  T LP+++K
Sbjct:   28 KIISLDDFQAQAKKLLSKALYEYVASGSDDEQTLAENKQAFKRCFLRPRMMKAVEPLDTRTTIFGDTFSMPVFISPHGVHKLMHSDGEEATSRAAAEAGILMGVSQHATTSLEDVARAAPHGCRWFQAYILKDRELTGSIIQRAVKAGYKAIILTVDSVRFGSREADWRNEFSGLPPGFSLPNYPSTDGYGDRAKDAWDQNTEKLFDAQIEWQEGIALIRQYTDLPIVVK 257          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: A0A7R9UB18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB18_9STRA)

HSP 1 Score: 241 bits (616), Expect = 9.450e-77
Identity = 121/215 (56.28%), Postives = 157/215 (73.02%), Query Frame = 1
Query:   46 LPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTAN-GYGDRVRDSWDQNSEKLLDATATWEDVSWLRSLTRLPLLLK 687
            LP D+YEY+ASG+ DE TL ENRAAF+RVFL+PR+ R+ S  +L V++LG   ++PV VSPAGVH L HP GE ATARA +   ++  +SQH+T S+EDVA A+P   RW+Q YLLKDR LT  ++ RA  A Y+A++LTVDSA FG READ RN FNGLP  L LANY     G+ DR +D+WDQN+E+L +   +W+DVSWL  L  +P+L+K
Sbjct:    2 LPKDLYEYLASGTGDEQTLQENRAAFRRVFLIPRVQRDTSTCNLQVQVLGAHAALPVFVSPAGVHALAHPEGELATARAASRAESVFCLSQHSTYSIEDVAKASPSSRRWYQAYLLKDRSLTRDLVLRAVKAGYSAVILTVDSAVFGNREADARNGFNGLPEHLCLANYGEIRAGWDDRDKDAWDQNTERLFERNVSWQDVSWLVELLPVPVLVK 216          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: W7TK72_9STRA (Glycolate oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK72_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.860e-73
Identity = 132/253 (52.17%), Postives = 173/253 (68.38%), Query Frame = 1
Query:    1 KVISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDT------SMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAA-----PDGVR------------WFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTANGYGDRVRDSWDQNSEKLLDATATWE-DVSWLRSLTRLPLLLK 687
            +++SL+D QA A+K LP  +YEYVASGSDDE TL ENR  FKR  L PR+  +VSK+D+S+ +   DT      S+P+++SPAGVH L+HP GE AT RA      IMGVSQHAT  +EDVA AA     P                W+QLY+L+DR LT+ ++RRAE++ Y A++LTVDS  FG READWRN F GLP G+ LANYPT + Y DR++  WDQNSE LLD ++++E D+ WL S+T LP+++K
Sbjct:   22 RLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFE-DTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPAXXXXXXXXXXXPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVK 273          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: A0A4D9CNW4_9STRA (FMN hydroxy acid dehydrogenase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNW4_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.580e-72
Identity = 131/253 (51.78%), Postives = 172/253 (67.98%), Query Frame = 1
Query:    1 KVISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDT------SMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAA-----PDGVR------------WFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTANGYGDRVRDSWDQNSEKLLDATATWE-DVSWLRSLTRLPLLLK 687
            +++SL+D QA A+K LP  +YEYVASGSDDE TL ENR  FKR  L PR+  +VSK+D+S+ +   DT      S+P+++SPAGVH L+HP GE AT RA      +MGVSQHAT  +EDVA AA     P                W+QLY+L+DR LT+ ++RRAE++ Y A++LTVDS  FG READWRN F GLP G+ LANYPT   Y DR++  WDQNSE LLD ++++E D+ WL S+T LP+++K
Sbjct:   22 RLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFE-DTAHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVVMGVSQHATTCMEDVAKAAVTLPTPSPAXXXXXXXXXXXPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKRAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVK 273          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: A0A8J2SZI7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZI7_9STRA)

HSP 1 Score: 223 bits (567), Expect = 5.280e-68
Identity = 123/224 (54.91%), Postives = 147/224 (65.62%), Query Frame = 1
Query:    4 VISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANY-PTANGYGD-----RVRDSWDQNSEKLLDATATWEDVSWLR 657
            V +++DFQ LAK  L   +YEY+ASGS DE TL ENRAAF R  L PR LR V  +  +  + G + ++PV  SPAGVH LV   GE ATARAC   G + G+SQHAT+ +EDVAAAAP   RWFQ YLLKDR  T+ ++RRA AA Y  + LTVDS RFG RE D RN+F  LP  L+LANY  T  G G      R   +WDQNSE L D  A+W+ VSWLR
Sbjct:   22 VHNVDDFQRLAKDVLERPLYEYLASGSGDEVTLRENRAAFGRYALRPRALRPVDALSTTCELFGNELALPVFASPAGVHSLVDDEGECATARACGRAGVLFGLSQHATVCIEDVAAAAPGAHRWFQSYLLKDRAATLDLVRRAVAAGYRGVFLTVDSVRFGFREVDARNNFCALPPPLTLANYVATPPGIGAAAWEAREHRAWDQNSEALFDTAASWDAVSWLR 245          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: F0Y5T1_AURAN (FMN hydroxy acid dehydrogenase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5T1_AURAN)

HSP 1 Score: 219 bits (558), Expect = 9.270e-67
Identity = 120/222 (54.05%), Postives = 146/222 (65.77%), Query Frame = 1
Query:   10 SLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANY------PTANGYGDRVRDSWDQNSEKLLDATATWEDVSWLR 657
            S++DFQ LA+  L   +YEY+ASGS DE TL +NRAAF R  L PR LR V  +  +  + G + ++PV  SPAGVH LV  AGE ATARAC   G + G+SQHAT+S+EDVAAAAP   RW+Q YLLKDR  T  ++RRA AA    I LTVDS RFG READ RN F  LP  L+LANY       +A  +  R   +WDQNSE L D  A+W+ V+WLR
Sbjct:   11 SVDDFQRLAETLLDRPLYEYLASGSGDEATLRDNRAAFGRYALRPRALRPVEGLSTARTLFGAELNLPVFASPAGVHALVDGAGERATARACGRAGALFGLSQHATVSIEDVAAAAPKAHRWYQAYLLKDRAATRDLVRRAVAAGSRGIFLTVDSVRFGFREADARNGFCALPPPLTLANYLATPPGESAAAWETREHRAWDQNSEALFDTAASWDAVAWLR 232          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: B7G7W1_PHATC (Glycolate oxidase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7W1_PHATC)

HSP 1 Score: 213 bits (541), Expect = 3.890e-64
Identity = 115/236 (48.73%), Postives = 152/236 (64.41%), Query Frame = 1
Query:    4 VISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTANG------YGDRVRDSWDQNSEKLLDATATWEDVSWLRSLT--RLPLLLK 687
            +++++D+Q LAK  LP  +YEY+ASG+ D  TL ENR AF R +L PR +R V +I   + + G   SMPV  SPAGVH L HP GE ATAR C   G + G+SQHAT S+E VAAAAP   R++Q Y+LKDR +T ++++RA  A Y+ I LTVDS RFG READ RN F+ LP+   LANY           Y  +   +WDQNSE L +   +W+DV+WL+      LPL++K
Sbjct:   10 LLNVDDYQVLAKTKLPHSLYEYLASGTADATTLRENRDAFARWYLRPRAMRPVGRISTRMVLFGQGLSMPVFCSPAGVHALCHPDGECATARVCQDLGLLFGLSQHATKSIEQVAAAAPQSHRYYQAYILKDRSITARLVQRAIQAGYSGIFLTVDSVRFGYREADARNGFDALPSPHRLANYDEVRQQNLDQTYNAKTHLAWDQNSELLFEQNVSWKDVTWLKEEVCGGLPLIVK 245          
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Match: UPI001C443B50 (alpha-hydroxy-acid oxidizing protein n=2 Tax=Enterobacteriaceae TaxID=543 RepID=UPI001C443B50)

HSP 1 Score: 201 bits (512), Expect = 1.570e-61
Identity = 109/231 (47.19%), Postives = 159/231 (68.83%), Query Frame = 1
Query:    1 KVISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRMLRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGTIMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYAAIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTAN-GYGDRVRDSWDQNSEK-LLDATATWEDVSWLRSLTRLPLLLK 687
            ++ ++ ++QA+AK+ LP   Y+Y ASG++DE TL ENR AF R+   PR+L +VS ID++  +LG   SMP+++SP  + ++ HP GE ATARA +A GTIM +S  AT S+E+VA+  P G+R+FQLY+ KDR++  Q++RRAE A + AI LTVD+ R G READ +N F  LP GL+L N+   N G  D+  DS   +     +D T +W+DV WL+S+T +P+L+K
Sbjct:    2 EITNVTEYQAIAKQKLPKMAYDYYASGAEDEWTLKENREAFSRILFRPRILIDVSTIDMTTSVLGMKISMPIMISPTAMQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGP-GIRFFQLYVYKDRKVVEQLVRRAEKAGFKAIALTVDTPRLGRREADIKNRFV-LPPGLTLKNFEGLNLGTMDQANDSGLASYVAGQIDRTLSWKDVKWLQSITTMPILVK 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8363.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSB4_ECTSI1.240e-10669.43Glycolate Oxidase (2-Hydroxyacid Oxidase) n=2 Tax=... [more]
A0A835ZFZ5_9STRA2.990e-9262.45Glycolate oxidase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2V2J3_9STRA4.040e-9161.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UB18_9STRA9.450e-7756.28Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W7TK72_9STRA1.860e-7352.17Glycolate oxidase n=2 Tax=Nannochloropsis gaditana... [more]
A0A4D9CNW4_9STRA1.580e-7251.78FMN hydroxy acid dehydrogenase domain-containing p... [more]
A0A8J2SZI7_9STRA5.280e-6854.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y5T1_AURAN9.270e-6754.05FMN hydroxy acid dehydrogenase domain-containing p... [more]
B7G7W1_PHATC3.890e-6448.73Glycolate oxidase n=2 Tax=Phaeodactylum tricornutu... [more]
UPI001C443B501.570e-6147.19alpha-hydroxy-acid oxidizing protein n=2 Tax=Enter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8363contigP-wetherbeei_contig8363:90..1590 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009035605.1
Preferred nameGOX
PFAMsFMN_dh
Model size687
Max annot lvl2759|Eukaryota
KEGG rclassRC00042
KEGG koko:K11517,ko:K13344
KEGG TC3.A.20.1
KEGG ReactionR00475
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00630,map01100,map01110,map01120,map01130,map01200,map04146
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
GOsGO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003674,GO:0003824,GO:0003973,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005829,GO:0005840,GO:0005911,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008891,GO:0009058,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009725,GO:0009735,GO:0009853,GO:0009987,GO:0010033,GO:0010109,GO:0010204,GO:0016020,GO:0016032,GO:0016491,GO:0016614,GO:0016899,GO:0016999,GO:0017000,GO:0017144,GO:0019048,GO:0019222,GO:0022626,GO:0023052,GO:0030054,GO:0031323,GO:0031347,GO:0031349,GO:0032991,GO:0035821,GO:0042221,GO:0042579,GO:0042742,GO:0042743,GO:0043094,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044003,GO:0044237,GO:0044249,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0048046,GO:0048518,GO:0048583,GO:0048584,GO:0050665,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0055044,GO:0055114,GO:0065007,GO:0072593,GO:0080134,GO:0098542,GO:1903409,GO:1990904
Exons5
Evalue1.52e-67
EggNOG OGsCOG1304@1|root,KOG0538@2759|Eukaryota
EC1.1.3.15
Descriptionvery-long-chain-(S)-2-hydroxy-acid oxidase activity
Cds size687
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187035.811529-CDS-P-wetherbeei_contig8363:89..1711683187035.811529-CDS-P-wetherbeei_contig8363:89..171Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8363 90..171 -
1683187035.8237872-CDS-P-wetherbeei_contig8363:310..3841683187035.8237872-CDS-P-wetherbeei_contig8363:310..384Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8363 311..384 -
1683187035.8329647-CDS-P-wetherbeei_contig8363:750..8851683187035.8329647-CDS-P-wetherbeei_contig8363:750..885Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8363 751..885 -
1683187035.8423355-CDS-P-wetherbeei_contig8363:1071..11721683187035.8423355-CDS-P-wetherbeei_contig8363:1071..1172Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8363 1072..1172 -
1683187035.851627-CDS-P-wetherbeei_contig8363:1295..15901683187035.851627-CDS-P-wetherbeei_contig8363:1295..1590Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8363 1296..1590 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8363.1.1prot_P-wetherbeei_contig8363.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8363 90..1590 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8363.1.1

>prot_P-wetherbeei_contig8363.1.1 ID=prot_P-wetherbeei_contig8363.1.1|Name=mRNA_P-wetherbeei_contig8363.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp
KVISLNDFQALAKKTLPTDIYEYVASGSDDEHTLSENRAAFKRVFLVPRM
LRNVSKIDLSVRILGCDTSMPVLVSPAGVHQLVHPAGEGATARACAATGT
IMGVSQHATMSLEDVAAAAPDGVRWFQLYLLKDRQLTVQILRRAEAARYA
AIVLTVDSARFGTREADWRNSFNGLPAGLSLANYPTANGYGDRVRDSWDQ
NSEKLLDATATWEDVSWLRSLTRLPLLLK
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mRNA from alignment at P-wetherbeei_contig8363:90..1590-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8363.1.1 ID=mRNA_P-wetherbeei_contig8363.1.1|Name=mRNA_P-wetherbeei_contig8363.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1501bp|location=Sequence derived from alignment at P-wetherbeei_contig8363:90..1590- (Phaeothamnion wetherbeei SAG_119_79)
AAGGTGATTAGTCTTAATGACTTTCAGGCGCTGGCAAAGAAGACTCTTCC GACCGACATTTATGAGTACGTGGCCAGTGGGAGCGACGACGAGCACACCT TGAGCGAAAATAGAGCGGCTTTCAAGCGCGTTTTTCTCGTTCCGCGAATG CTCCGCAACGTATCCAAGATCGACTTGAGCGTTAGAATCCTTGGCTGCGA CACCTCCATGCCTGTGCTGGTGTCGCCGGCGGGCGTGCATCAACTTGTCC ATCCGGCTGGCGAAGGGGCGACAGCCCGCGCCTGTGCCGCCACAGGTATA GGAAAATCTCCTTTTGGCAATTTAAGTTGCTTTCCGGGTTTGCCGGACTG TTGGCAGTCATTTGTAGCAAAGCGTGGAGCAGCTTCTTCAACCCATTCTT TCATCCTTTCCTTTGCAGGCACTATAATGGGAGTGTCGCAGCACGCAACG ATGAGCTTAGAAGATGTCGCCGCCGCTGCGCCGGACGGCGTCAGGTGGTT CCAGCTTTACTTGCTAAAGGTAAAACCCTTCCAACCTTCCATTTTGCACG CATCTTTTGTTCTATCGTACTGTAATGTGAAGTAAAAGCTGCCGGCGACG CAAGATTATGCCGCTGTAGAAATAGAATGGTGGTACTTGAATCCCAACGT GTTACCTCACTTCTTCTCATCCCTTCTTTGCGATGTGTGTCCGTCTCTTC AACAGGACCGGCAGCTGACGGTGCAGATCTTGCGGAGGGCCGAGGCCGCC AGATACGCCGCCATCGTGCTGACCGTCGATTCAGCGCGTTTCGGCACCCG GGAGGCTGACTGGCGCAACTCGTTCAACGGTCTCCCGGCGGTGAGTCCCG ACCGCAGTTGGCGGCCACGCAGCGGCGCAAACGGCGCGCATTCATATGGG CTTGCAGGAACCCACCAAGCAGCAGGTGCAGCGGTATTCCTTTTTGGGGG AGGAACGCGCATGCGTAGTGCTTCCGGCACTTTTTCCCGTTTGGAGCTGG GCTTGCCTTCTGAAACTGTTTTATGTTTTAAGGCTCTGCCTTTCTTCAGC TTCCTCATTTCAGCTCAGAAGTGCACGTCTCTGGTCTCTTGCTTTCATTA TAGCACTCCGATTCGGGCTGGCGGCGGAGTTTTCCCGTTTTTCTCATCTC TCTCCTTACTGCGCGCCTCGTTTGTATCGTCGTGACGCGACACCGGCCGG CGGCAGGGCCTGTCCTTGGCCAACTATCCAACGGCGAATGGCTATGGCGA CCGTGTGCGCGACTCGTGGGACCAGAACAGGTGTGTGTCGGCCGTATCGC CACCGCCGGTACGAAAAGCGGCCAGCCCGCCACGGAGTACCACCGTTTCT TTTTCCTTCATCCCCTGTCTGATGCTCAACGTGTACCGTTTCGCCGCTGC CACCCTGCTCTGAGGACAGCGAGAAGCTGCTGGACGCCACTGCCACCTGG GAGGACGTCTCCTGGCTGCGGTCTCTGACGCGCCTGCCCCTCCTGCTCAA G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8363:90..1590-

>mRNA_P-wetherbeei_contig8363.1.1 ID=mRNA_P-wetherbeei_contig8363.1.1|Name=mRNA_P-wetherbeei_contig8363.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig8363:90..1590- (Phaeothamnion wetherbeei SAG_119_79)
AAGGTGATTAGTCTTAATGACTTTCAGGCGCTGGCAAAGAAGACTCTTCC
GACCGACATTTATGAGTACGTGGCCAGTGGGAGCGACGACGAGCACACCT
TGAGCGAAAATAGAGCGGCTTTCAAGCGCGTTTTTCTCGTTCCGCGAATG
CTCCGCAACGTATCCAAGATCGACTTGAGCGTTAGAATCCTTGGCTGCGA
CACCTCCATGCCTGTGCTGGTGTCGCCGGCGGGCGTGCATCAACTTGTCC
ATCCGGCTGGCGAAGGGGCGACAGCCCGCGCCTGTGCCGCCACAGGCACT
ATAATGGGAGTGTCGCAGCACGCAACGATGAGCTTAGAAGATGTCGCCGC
CGCTGCGCCGGACGGCGTCAGGTGGTTCCAGCTTTACTTGCTAAAGGACC
GGCAGCTGACGGTGCAGATCTTGCGGAGGGCCGAGGCCGCCAGATACGCC
GCCATCGTGCTGACCGTCGATTCAGCGCGTTTCGGCACCCGGGAGGCTGA
CTGGCGCAACTCGTTCAACGGTCTCCCGGCGGGCCTGTCCTTGGCCAACT
ATCCAACGGCGAATGGCTATGGCGACCGTGTGCGCGACTCGTGGGACCAG
AACAGCGAGAAGCTGCTGGACGCCACTGCCACCTGGGAGGACGTCTCCTG
GCTGCGGTCTCTGACGCGCCTGCCCCTCCTGCTCAAG
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