prot_P-wetherbeei_contig836.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig836.3.1
Unique Nameprot_P-wetherbeei_contig836.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length240
Homology
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A7S4MMP8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MMP8_9STRA)

HSP 1 Score: 251 bits (640), Expect = 7.720e-73
Identity = 126/201 (62.69%), Postives = 157/201 (78.11%), Query Frame = 0
Query:   11 VLPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTP--------NCRMFISQPKRIAVKSLLDRVRQ-SPGMKDVVGMRMGHGMRD-EGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLAAL 201
            VLP+D H +EI++ + E  VTII GETGCGKSSRVP+ML  + P        + +MFISQP+RIA KSL +RVRQ  P ++D + +RMGHG+R+ E P TR WFVTTGYLVRL+A+HP++F +HTHLI+DEVHERSVDTD+LCL  RRLL  H T+RLVLMSAT+AA +YR YF  PEPP+FVG RRFPI+ ++ EDLA L
Sbjct:  668 VLPIDEHEEEILRTIAEQRVTIIQGETGCGKSSRVPVMLLRAPPPEPTSNARSVKMFISQPRRIAAKSLAERVRQCEPDLRDCIALRMGHGVREYECPSTRAWFVTTGYLVRLLANHPKSFTSHTHLIIDEVHERSVDTDILCLLCRRLLTTHPTIRLVLMSATMAAALYRSYFGTPEPPIFVGARRFPIKEYFVEDLAQL 868          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A7S4RFM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RFM2_9STRA)

HSP 1 Score: 238 bits (608), Expect = 6.980e-70
Identity = 118/197 (59.90%), Postives = 154/197 (78.17%), Query Frame = 0
Query:   12 LPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTP------NCRMFISQPKRIAVKSLLDRVRQS-PGMKDVVGMRMGHGMRDEGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLAAL 201
            LP+DAH+D I+  V+ + VTII GETGCGKSS+VP+ML ++ P        RMFI QP+RIA KSL +R++ + P  K + G+RMGHG+R+E   TR+WF TTGYLVRL+A++PE FD+ THL++DEVHERSV+TD+LCL  RRLL+R+K +RL+LMSAT+AA MYR+YF V E PLFVGVR FPI+ +Y ED+  L
Sbjct:  608 LPIDAHKDVILTSVQNNRVTIIQGETGCGKSSKVPIMLLETPPPDPTFKEVRMFICQPRRIAAKSLTERIKSTHPQYKHLFGLRMGHGVREETKDTRVWFATTGYLVRLLANYPERFDDCTHLVIDEVHERSVETDVLCLLARRLLERNKRIRLILMSATVAAGMYRDYFQVKESPLFVGVRCFPIQEYYLEDVVTL 804          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A7S2SUV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUV2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 5.410e-69
Identity = 117/206 (56.80%), Postives = 144/206 (69.90%), Query Frame = 0
Query:    1 PAAPPVVG-----EVV-LPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLML---YDSTPN-------------CRMFISQPKRIAVKSLLDRVRQSPGMKDVVGMRMGHGMRDEGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVG 184
            P APP V      EVV LP+  H D I  HV +H +TIIHGETGCGKSS VPLML   +D+                 +MF++QP+RIA +SL  RVRQ     D+VG+R+GHG RDE  +TR+WF T GY+  L+AHH E F +HTHLI+DEVHERS+DTD+LCL  RRLL  H TLRL+LMSAT+AA+++R+YF VPEPPLFVG
Sbjct:   53 PPAPPEVDAEQTQEVVRLPIHDHEDTICNHVADHRITIIHGETGCGKSSTVPLMLLRHHDARREDKAFRGDPMYKKPAKMFVTQPRRIAARSLCQRVRQVSKEPDLVGLRLGHGERDEKSQTRVWFATVGYVALLLAHHQEKFRDHTHLIIDEVHERSIDTDILCLLARRLLASHPTLRLILMSATIAAELHRQYFGVPEPPLFVG 258          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: K0RU78_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU78_THAOC)

HSP 1 Score: 236 bits (603), Expect = 7.190e-68
Identity = 117/200 (58.50%), Postives = 153/200 (76.50%), Query Frame = 0
Query:   11 VLPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTP--------NCRMFISQPKRIAVKSLLDRVRQ-SPGMKDVVGMRMGHGMRD-EGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLAA 200
            VLP+D H  EI++ V+   +TIIHGETGCGKSSRVP ML  ++P          +M +SQP+RIA K+L +RVR   P + D +G+RMGHG+R+ E   TR WFVTTGY+VRL+A+HP  FD H+HLI+DEVHERSVDTD+LCL  RRLL  H T+RLVLMSAT+AA++Y++YF VP+PP+ VG RRFPI+ ++ E+LA+
Sbjct:  661 VLPIDEHEGEILRAVRTQRITIIHGETGCGKSSRVPCMLLRASPPEPTATAPEVKMIVSQPRRIAAKALAERVRSCEPDLADKIGLRMGHGIREYETKDTRAWFVTTGYVVRLLANHPGWFDTHSHLIIDEVHERSVDTDILCLLCRRLLNSHPTIRLVLMSATMAAELYQQYFGVPQPPIHVGARRFPIKEYFVEELAS 860          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A7S2L2B3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L2B3_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.190e-66
Identity = 126/246 (51.22%), Postives = 168/246 (68.29%), Query Frame = 0
Query:    9 EVVLPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDS--------TPNCRMFISQPKRIAVKSLLDRVRQ-SPGMKDVVGMRMGHGMRD-EGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLAA-LRLPQKAAEQARRLS---TNTEGGGAPASVVTNLQQQLAVQVS 240
            ++VLP+D H  EI+  +K   VTIIHGETGCGKSSRVP  L  +         P  +M +SQP+RIA K+L +RVR+  P +   + +RMGHGM++ E  KTR WFVTTGY+VRL+A+HP  FD+HTHLI+DEVHERSVD+D+LCL  RRLL  H T+RLVLMSATLAAD+Y +YF  P+P + VGVRRFPI  ++ EDL + L L +K A+ ++ +      +    AP   + +    LA Q++
Sbjct:  315 KLVLPIDKHEREILNTIKTQRVTIIHGETGCGKSSRVPCFLLRAEPPQPSLAAPEVKMIVSQPRRIAAKALAERVRKVEPDLAHKIALRMGHGMKEFETQKTRAWFVTTGYVVRLLANHPHWFDSHTHLIIDEVHERSVDSDILCLLCRRLLHSHPTIRLVLMSATLAADLYSQYFGAPQP-IHVGVRRFPINEYFVEDLESQLSLSRKHAQYSQDIHDECAKSRCSAAPPDAIKDKMYHLASQIT 559          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A8J2SN25_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN25_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.180e-66
Identity = 119/210 (56.67%), Postives = 155/210 (73.81%), Query Frame = 0
Query:   12 LPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTPNCRMFISQPKRIAVKSLLDRVRQSPGMKDVVGMRMGHGMRDEGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPE--PPLFVGVRRFPIETFYSEDLA-ALRLPQKAAEQARRLSTNT 218
            LP+DAHR EI+  +  + VTI+ GETGCGKSSR+PLML ++    +MF+SQP+RIA ++L DRVRQS G  + VG+R+G G RDE  KTRLWF +TGYLVRL+A HP+A   HTH+IVDEVHERSVDT++LCL  RRL+Q H T+R+VLMSAT+  D+Y  YF V      L VG RR+P+  FY++D+  +LRLP+     A+RL  +T
Sbjct:  447 LPIDAHRLEILDTIARNRVTIVCGETGCGKSSRLPLMLLENDSKAKMFVSQPRRIAARALCDRVRQSLG--EEVGLRLGFGERDESRKTRLWFCSTGYLVRLVAAHPQALKTHTHIIVDEVHERSVDTEILCLLLRRLVQEHPTIRVVLMSATVCVDLYASYFGVDPRTSSLHVGARRYPVTEFYADDVVDSLRLPENLHSNAQRLVLHT 654          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A448ZQI2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQI2_9STRA)

HSP 1 Score: 231 bits (590), Expect = 4.020e-66
Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 0
Query:   12 LPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTP------NCRMFISQPKRIAVKSLLDRVRQ-SPGMKDVVGMRMGHGMRD-EGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLAALRLPQKAAEQARRLSTNTE 219
            LP+D H   I+++++ H VTIIHGETGCGKSSRVP+ML  + P        + FISQP+RIA K+L++RVR   P  K+   +RMGHG ++ E  +T+ +FVTTGYLVRL+A++PE F++ THL++DEVHERSVDTD+LCL  RRLL+ ++ +RLVLMSATLA  MYREYF VP  P+ VGVRR+PI  ++ EDLA   LP + A+ A  +    E
Sbjct:  548 LPIDEHESAILENIRNHRVTIIHGETGCGKSSRVPVMLLKAPPPDGSLQKVKFFISQPRRIAAKALVERVRSCEPEFKNKFALRMGHGWKEYESKETQAYFVTTGYLVRLLANNPERFEDCTHLVIDEVHERSVDTDILCLLCRRLLETNENIRLVLMSATLATKMYREYFDVPNEPIHVGVRRYPITEYFVEDLAQFGLPNQEAKAALAIQQENE 763          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A835ZFW1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.460e-66
Identity = 100/143 (69.93%), Postives = 121/143 (84.62%), Query Frame = 0
Query:   12 LPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTPN----CRMFISQPKRIAVKSLLDRVRQSPGMKDVVGMRMGHGMRDEGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLL 150
            LP+D HRDEI+QH+ +H VTIIHGETGCGKSSRVPLML +   +     RMF+SQP+RIA K+L+DRVRQ+   +D++GMR+GHGMR EGP+TR+WFVT GYLVRL+AHHPEAF  HTHLI+DEVHERSVDTD+LCL  +RLL
Sbjct:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQA-SCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 142          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A8J2X0N8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0N8_9STRA)

HSP 1 Score: 231 bits (589), Expect = 5.010e-66
Identity = 115/206 (55.83%), Postives = 156/206 (75.73%), Query Frame = 0
Query:   12 LPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTPNCRMFISQPKRIAVKSLLDRVRQSPGMKDVVGMRMGHGMRDEGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLA---ALR-LPQKAAEQARR 213
            LP+DAH D+I +HV  H VT+IHGETGCGKSSRVPL+L ++ P+ +MF+SQP+RIA ++L DRVR +    D + +R+GHG+RDE    R+ FVT GYLVRL+AHHPE+   H+H+IVDEVHER+VD D+LCL  RRLL     L++VLMSATLA ++Y  YF  P P +FVG +RFP++ F+++DLA   A R LP++ A +A++
Sbjct:    3 LPIDAHADKIAEHVARHRVTVIHGETGCGKSSRVPLILLEADPDAKMFVSQPRRIAARALCDRVRDTHSDPDDIALRLGHGVRDEALDARIIFVTCGYLVRLVAHHPESLREHSHVIVDEVHERTVDADILCLLVRRLLDASPRLKVVLMSATLAGELYCSYFRSPLP-IFVGAKRFPVDCFFADDLADGTADRFLPERLAPRAQQ 207          
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Match: A0A1E7ENH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ENH0_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.860e-65
Identity = 122/216 (56.48%), Postives = 155/216 (71.76%), Query Frame = 0
Query:   12 LPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLYDSTP------NCRMFISQPKRIAVKSLLDRVRQ-SPGMKDVVGMRMGHGMRD-EGPKTRLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLLQRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLAALRLPQKAAEQARRLSTNTE 219
            LP+D H  EI+  ++ + VTIIHGETGCGKSSRVP+ML  S P        + FISQP+RIA K+L++RVR   P +KD   +RMG G ++ E  +T+  FVTTGYLVRL+A+HPE F+  THL++DEVHERSVDTDLLCL +RRLLQ +KT+RLVLMSATLA  MYR+YFSV   P+ VGVR FPI  ++ EDL+   LP + A+ A  +    E
Sbjct:  299 LPIDDHETEILDDIRNNRVTIIHGETGCGKSSRVPVMLLKSPPPDGSLRKVKFFISQPRRIAAKALVERVRSCEPDLKDKFSLRMGGGWKEYESKETQASFVTTGYLVRLLANHPEKFNEMTHLVIDEVHERSVDTDLLCLLSRRLLQTNKTIRLVLMSATLATKMYRDYFSVINEPIHVGVRTFPITEYFIEDLSQFGLPSQEAKAASAIRKEIE 514          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig836.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4MMP8_9STRA7.720e-7362.69Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4RFM2_9STRA6.980e-7059.90Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2SUV2_9STRA5.410e-6956.80Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K0RU78_THAOC7.190e-6858.50Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2L2B3_9STRA1.190e-6651.22Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A8J2SN25_9STRA2.180e-6656.67Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A448ZQI2_9STRA4.020e-6654.63Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A835ZFW1_9STRA4.460e-6669.93P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8J2X0N8_9STRA5.010e-6655.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1E7ENH0_9STRA1.860e-6556.48Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 10..193
e-value: 6.3E-9
score: 45.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 22..183
score: 15.809362
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 9..183
e-value: 8.0E-49
score: 167.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..165
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 20..168
e-value: 6.3E-6
score: 26.1
NoneNo IPR availablePANTHERPTHR18934:SF113ATP-DEPENDENT RNA HELICASE TDRD9coord: 12..207
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 12..207
NoneNo IPR availableCDDcd17917DEXHc_RHA-likecoord: 28..174
e-value: 1.55934E-52
score: 165.33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig836contigP-wetherbeei_contig836:7112..8575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig836.3.1mRNA_P-wetherbeei_contig836.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig836 7112..8575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig836.3.1 ID=prot_P-wetherbeei_contig836.3.1|Name=mRNA_P-wetherbeei_contig836.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp
PAAPPVVGEVVLPVDAHRDEIVQHVKEHAVTIIHGETGCGKSSRVPLMLY
DSTPNCRMFISQPKRIAVKSLLDRVRQSPGMKDVVGMRMGHGMRDEGPKT
RLWFVTTGYLVRLMAHHPEAFDNHTHLIVDEVHERSVDTDLLCLFTRRLL
QRHKTLRLVLMSATLAADMYREYFSVPEPPLFVGVRRFPIETFYSEDLAA
LRLPQKAAEQARRLSTNTEGGGAPASVVTNLQQQLAVQVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom