mRNA_P-wetherbeei_contig836.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: D7G8L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L4_ECTSI) HSP 1 Score: 192 bits (488), Expect = 1.960e-59 Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 1
Query: 1 TKLYLPGAAECLEFVDGDGGAPTLVVSCRGLPHLTYVDCETLQQAKVSINDNAWDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLLGHSGAVRDVHGDAASRRIVTASYDKSVRVW 528
T+LY P A E +EFV G+GGA LVVS R PHLTYV+ ETLQQ +VS+N+ WD+HVSF+++ + S G+YLLAATDKSR++L+R G + VRTL D YFQPR +D SG F+ N+ D+ +HV CLAS R V L GH +RD+H D + R +VTASYDK+V+VW
Sbjct: 14 TQLYFPEAVESVEFVKGEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAAS--GDGKYLLAATDKSRNILWRAGSNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPSRRVLVTASYDKTVKVW 187
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A6H5JKD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD0_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.230e-58 Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 1
Query: 1 TKLYLPGAAECLEFVDGDGGAPTLVVSCRGLPHLTYVDCETLQQAKVSINDNAWDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLLGHSGAVRDVHGDAASRRIVTASYDKSVRVW 528
T+LY P A E +EFV G+GGA LVVS R PHLTYV+ ETLQQ +VS+N+ WD+HVSF+++ + S G+YLLAATDKSR++L+R G + VRTL D YFQPR +D SG F+ N+ D+ +HV CLAS R V L GH +RD+H D + R +VTASYDK+V+VW
Sbjct: 93 TQLYFPEAVESVEFVRGEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAAS--GDGKYLLAATDKSRNILWRAGSNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRAVEQLKGHRAVIRDIHHDPSRRVLVTASYDKTVKVW 266
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A836CE45_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE45_9STRA) HSP 1 Score: 169 bits (427), Expect = 6.710e-49 Identity = 91/181 (50.28%), Postives = 115/181 (63.54%), Query Frame = 1
Query: 1 TKLYLPGAAECLEFVDG--DGGAPTLVVSCRGLPHLTYVDCET---LQQAKVSINDNAWDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLLGHSGAVRDVHGDAASRRIVTASYDKSVRVW 528
TKLY P A E +EFV G G L+V+ R PHL YVD QA+VS+N NAWD+HVSFS+LGL SP GRY+LAATD++R +++R GH+ H+RTL AD YFQPR + SG A N+Q + +C+A R V GH+GAVRDV +R + TASYDKSV+VW
Sbjct: 112 TKLYFPEAVEAVEFVGGGASGDPQRLMVASREQPHLVYVDLVDGAGYAQARVSVNANAWDAHVSFSVLGLAASP--DGRYVLAATDRARTIVYRAGHNAHIRTLVGHAADAYFQPRAAWSPSGLTAFCNSQDARGVVAYCVAGARVVERAGGHAGAVRDVCTHPTARVLYTASYDKSVKVW 290
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A7S2SGN2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGN2_9STRA) HSP 1 Score: 144 bits (363), Expect = 7.500e-39 Identity = 81/180 (45.00%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 10 YLPGAAECLEFVDGDGG------APTLVVSCRGLPHLTYVDCETLQQA-KVSINDNAWDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLLGHSGAVRDVHGDAASRRIVTASYDKSVRVW 528
Y A + L FV G A LV++ RG P L YVD +VS+N +AWD+HVSF++L L SP GRYLLAATDK RH+++ VG H R L AD Y +PR +D+SG + + N+Q D+ + V+CLASQR V L GH G +RD+ + R + TASYD +V+VW
Sbjct: 156 YFREAVDALAFVPSPRGSAPGGQAECLVMAPRGHPALKYVDLGAPSTPWEVSLNASAWDTHVSFNVLHLEASP--DGRYLLAATDKDRHIIYPVGQHIHARELFGHAADAYAKPRVCWDSSGGYVLSNSQNDSGVFVWCLASQRVVHRLEGHKGIIRDLSHHPSRRLLATASYDHTVKVW 333
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A7S2SGK4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGK4_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.370e-37 Identity = 81/180 (45.00%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 10 YLPGAAECLEFVDGDGG------APTLVVSCRGLPHLTYVDCETLQQA-KVSINDNAWDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLLGHSGAVRDVHGDAASRRIVTASYDKSVRVW 528
Y A + L FV G A LV++ RG P L YVD +VS+N +AWD+HVSF++L L SP GRYLLAATDK RH+++ VG H R L AD Y +PR +D+SG + + N+Q D+ + V+CLASQR V L GH G +RD+ + R + TASYD +V+VW
Sbjct: 321 YFREAVDALAFVPSPRGSAPGGQAECLVMAPRGHPALKYVDLGAPSTPWEVSLNASAWDTHVSFNVLHLEASP--DGRYLLAATDKDRHIIYPVGQHIHARELFGHAADAYAKPRVCWDSSGGYVLSNSQNDSGVFVWCLASQRVVHRLEGHKGIIRDLSHHPSRRLLATASYDHTVKVW 498
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: K8YTZ0_NANGC (Uncharacterized protein (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTZ0_NANGC) HSP 1 Score: 142 bits (359), Expect = 3.630e-37 Identity = 78/201 (38.81%), Postives = 114/201 (56.72%), Query Frame = 1
Query: 4 KLYLPGAAECLEFVD---------------------GDGGA-----PTLVVSCRGLPHLTYVDCETLQQAKVSINDNAWDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLLGHSGAVRDVHGDAASRRIVTASYDKSVRVW 528
Y G E L FVD G+GG P L+V+ R + HLTY+DC++ ++ VS+N+ WD+HVSFS+L L SP +LLAATDKSR +L+R+GH+ +R+L+ AD Y PR +D +G + ++Q+ N L + LAS+R V L GH VRD+ D AS + + +YDK++R+W
Sbjct: 277 SFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLSACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQ--EFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLW 475
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A7S2ENR5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENR5_TRICV) HSP 1 Score: 119 bits (297), Expect = 1.920e-28 Identity = 67/182 (36.81%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 4 KLYLPGAAECLEFVDGDGGAPTLVVSCRGLPHLTYVDC-ETLQQAKVSINDNA--WDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLLG----HSGAVRDVHGDAASRRIVTASYDKSVRVW 528
++LPG E + F+D LV R P+L+Y D + +Q K ++N ++ HVSF+I+ L SP G+YL AATD SR+++F G S+ +R L+ DG+ QP+ + +SG++ GN Q+D+++ V+ +AS V L G H+ +RD+ S +VTASYDK+++VW
Sbjct: 261 SMHLPGPVEAMCFLDR---GEQLVCYARDTPYLSYFDMTDGYKQTKYNVNSEVKGFEDHVSFAIMHLVPSP--DGKYLAAATDTSRNIIFEAGSSKQIRNLYGHKNDGFSQPKIAWSSSGQYLFGNTQEDSSVCVWDIASASIVRRLDGSVGGHTSQIRDITSSPISDTLVTASYDKTIKVW 437
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A7S4VWJ4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VWJ4_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.020e-27 Identity = 68/188 (36.17%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 7 LYLPGAAECLEFVDGDGGAPTLVVSCRGLPHLTYVDCET-LQQAKVSINDNA----WDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQREVAVLL---------GHSGAVRDVHGDAASRRIVTASYDKSVRVW 528
L+L GA E + F++G L R +L+Y D E + K S+N +A +D HVSF+++ LT SP G+Y+ AATD SR ++ SR +R L+ DG+ QP+ + +G++ +GN Q+DN++ V+ +AS V L H+G +RD++ + S VTASYDK+V+VW
Sbjct: 270 LHLSGAVEAMCFLEG---GKILCCYVRNTSYLSYFDLEDGCKLTKYSLNGSAPTGGFDDHVSFAVMDLTPSP--DGKYIAAATDTSRQIILESSSSRQIRNLYGHKNDGFSQPKLAWSTNGQYILGNTQEDNSICVWDIASSSIVKRLNDKTCNSGGGAHTGQIRDLYSSSTSNTFVTASYDKTVKVW 452
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A7S2VZ64_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ64_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.440e-26 Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 85 RGLPHLTYVDCETLQQAKVSIN-DN---AWDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNA--LHVFCLASQREVAVLLG-HSGAVRDVHGDAASRRIVTASYDKSVRVW 528
R P+LTY++ + + K S+N DN ++ HVSF+++ L SP G+Y+ AATD SR+++ +VG S +R L+ D Y QPR + +G++ GNAQ D + + V+ +AS V G H G VRD+ S +VTASYDKSV+VW
Sbjct: 16 RDTPYLTYLNIQNWELIKYSLNGDNPAGGFEDHVSFAVMHLVVSP--NGKYICAATDSSRNIIMQVGTSHIIRNLYGHQNDSYSQPRVAWSKNGKYIFGNAQDDGSTTVVVWDIASSEIVRYFKGIHRGKVRDIFSSPHSDTLVTASYDKSVKVW 168
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Match: A0A7S3PUU5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUU5_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.510e-25 Identity = 74/182 (40.66%), Postives = 103/182 (56.59%), Query Frame = 1
Query: 4 KLYLPGAAECLEFVDGDGGAPTLVVSCRGLPHLTYVDC-ETLQQAKVSINDNA---WDSHVSFSILGLTRSPADGGRYLLAATDKSRHLLFRVGHSRHVRTLHAPLADGYFQPRCVFDASGRFAVGNAQQDNALHVFCLASQR--EVAVLLG-HSGAVRDVHGDAASRRIVTASYDKSVRVW 528
+L GA E L FV+ DG L + R LTY D + S+N + +DSHVSF+++ L SP G YL AATD SR+++ VG S VR L+ DG+ QPR + SG + GN+Q+D+ L V+ +AS + + G H+G +RD+ G S IVTASYDK+V+VW
Sbjct: 261 SFHLSGAVETLCFVN-DGNV--LCLYERETSVLTYFDLNDDFAATSHSLNGSVTGGFDSHVSFAVMQLVLSP--NGMYLCAATDASRNIIIEVGTSNIVRDLYGHKNDGFSQPRVAWSNSGEYIFGNSQEDSGLCVWDIASTKLLQTGAHKGQHTGKIRDIFGSKMSDTIVTASYDKNVKVW 437 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig836.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig836.1.1 >prot_P-wetherbeei_contig836.1.1 ID=prot_P-wetherbeei_contig836.1.1|Name=mRNA_P-wetherbeei_contig836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp TKLYLPGAAECLEFVDGDGGAPTLVVSCRGLPHLTYVDCETLQQAKVSINback to top mRNA from alignment at P-wetherbeei_contig836:238..765+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig836.1.1 ID=mRNA_P-wetherbeei_contig836.1.1|Name=mRNA_P-wetherbeei_contig836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig836:238..765+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig836:238..765+ >mRNA_P-wetherbeei_contig836.1.1 ID=mRNA_P-wetherbeei_contig836.1.1|Name=mRNA_P-wetherbeei_contig836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig836:238..765+ (Phaeothamnion wetherbeei SAG_119_79)back to top |