mRNA_P-wetherbeei_contig8280.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8280.2.1
Unique NamemRNA_P-wetherbeei_contig8280.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: D8LE72_ECTSI (FHA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE72_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.260e-48
Identity = 120/246 (48.78%), Postives = 161/246 (65.45%), Query Frame = 1
Query:   16 YSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDITSEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDDEKLPDYM-SEAQRQRRKDTQLGLHEADVVEKDRRLFERLQ 750
            Y PP W        S + L VLKGGV +G + +  + R H L GRQ+GVVD+LLEH S+SR+HA+LQ G++G +F+ D GSTHG  VNK   P  +EFHR+ VGD++KFGESTRLY ++GP E+ P EY+S+NL+ LR +A R+  A             XXXXXXXX        +SWGF EDA  E+XXXXXX         +   LPDY+ +EAQ++RR+DT++GL E +V ++D +LFE+LQ
Sbjct:   84 YKPPSWGLTEAPGASGLSLTVLKGGVEVGSISL--DNRTHVLLGRQQGVVDVLLEHPSISRKHAILQHGQNGALFLFDNGSTHGCSVNKKKIPP-KEFHRLHVGDVIKFGESTRLYALEGPEELRPAEYESDNLRNLRLDAGRKQLAAKLAKIKAGGAGEXXXXXXXXSGEYG---ISWGFDEDAVAEEXXXXXXXXXXXXXXVE---LPDYLKTEAQKRRRRDTKIGLTEDNVHKRDAKLFEKLQ 320          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: A0A836CFG3_9STRA (FHA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFG3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.350e-37
Identity = 102/276 (36.96%), Postives = 145/276 (52.54%), Query Frame = 1
Query:   16 YSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDITSEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGK-DGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEAL---RRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDDEKLPDYM-SEAQRQRRKDTQ--------------------------LGLHEADVVEKDRRLFERLQ 750
            Y  P WA  P     ++ L+VLK G ++ ++ +    + +Y  GRQ G VDI L+H S+SRQHAVLQ+G  +G + V+D GSTHGTFVNK      +++ ++ VGD++KFGESTRLY++ GP E++P EYDSENLQ+ R + L   + AEA                              SWGF EDA   D       G    +  D+E+LP+Y+ +EAQ+ RRK+ +                          +GL E DV  KD++ F+ LQ
Sbjct:    5 YVEPEWASRP---RKDMELEVLKSGTVVDKLALHE--KSYYTLGRQAGAVDIQLDHPSISRQHAVLQYGHAEGSLHVVDRGSTHGTFVNKQRLEP-KKYVKLNVGDVIKFGESTRLYVLCGPAELMPPEYDSENLQKYRLKKLVNSKLAEAGVKVGKDEADAQQDTG-------------ASWGFDEDAVESDS------GEGSDSEEDEEQLPEYLKTEAQKARRKELKSSITCQDRXXXXXXXXXXXXXXXXXXVGLKEEDVNAKDQKAFQNLQ 255          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: M4B2V9_HYAAE (FHA domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2V9_HYAAE)

HSP 1 Score: 144 bits (362), Expect = 6.920e-36
Identity = 89/249 (35.74%), Postives = 138/249 (55.42%), Query Frame = 1
Query:   16 YSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDITS-EGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDDEKLPDYMSEAQRQRRKDTQ---LGLHEADVVEKDRRLFERLQ 750
            YSPP W+     ++  + L+V+K GV +  + +   +GR +   GR   V D+ + H S+SR HAVLQF + G +F+ D  STHG +VNK    + ++F R+ +GD+L FGESTRLY++ GP E+LP EY+S NL +LR +  ++                                VSWGFGEDAE+E+         ++ AA   E LPDY+   +R++++D Q     +  + + EKD+RL+++LQ
Sbjct:    4 YSPPDWSTTG-RNVFTLSLEVIKSGVTVDRLPLDQKDGRSYVFIGRMETVCDVAVAHPSISRVHAVLQFDEQGALFLYDTRSTHGCYVNKRRVSA-EDFVRLHIGDVLVFGESTRLYVVCGPAELLPPEYESSNLTKLREKLGKKRSLQEDSKQLEERG------------------VSWGFGEDAEDEEEGESD---EEMDAAKTREALPDYLCNVRRRKKEDDQPYTSSVGPSQIHEKDQRLYQQLQ 229          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: A0A329RQU1_9STRA (FHA domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RQU1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.680e-35
Identity = 91/252 (36.11%), Postives = 134/252 (53.17%), Query Frame = 1
Query:   13 KYSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDIT-SEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDD-----EKLPDYMSEAQRQRRKDTQLGLHEADVVEKDRRLFERLQ 750
            +YSPP W          + L+V+KGGV++  +++  ++GR + L GR   V D+ L H S+SR HA LQF + G +F+ D+ STHG FVNK    +  EF R+ +GD+L FGESTRLY I GP E+LP EY+S NL + R +  ++ E                               SWGFGEDAE ++            A  DD     E+LPDY+   + +  +  +  + ++ V EKDR+L+++LQ
Sbjct:    3 QYSPPEWGSSGRNEFG-IYLEVIKGGVVVETLELPRNDGRSYVLAGRMETVCDLALAHPSISRTHAALQFDEQGALFLYDIHSTHGCFVNKKRVLA-DEFVRLHIGDVLGFGESTRLYAICGPPELLPAEYESLNLAKFRKKLAKKREISKEKQEERG--------------------ASWGFGEDAEEDES-----------AXXDDSVKGKEELPDYLRNLKEEEDQPYKSSVSQSQVSEKDRKLYQQLQ 221          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: A0A2D4CB17_PYTIN (FHA domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB17_PYTIN)

HSP 1 Score: 142 bits (359), Expect = 1.910e-35
Identity = 109/256 (42.58%), Postives = 141/256 (55.08%), Query Frame = 1
Query:   16 YSPPRWAQPPPLSLSEVRLQVLKGGVI---LGEVDITSEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGG--------RKIVAAGDDEKLPDYMSEAQRQRRKDTQLGLHEADVVEKDRRLFERLQ 750
            Y+PP W          V + V+KGGV+   L  + +T+  R   L GR     D++L+H S+SR HA LQF   G +F+ D+ STHGTFVNK   P   E+ R+ +GD++ FGESTRLY + GP E+LPEEYDSENLQ+LR +   R E XXXX                       D VSWGF EDAE   XXXXXX          +K   A +D  LP+Y+   +   R   +  + EADV  KD+RLFE+LQ
Sbjct:   11 YAPPAWGVDGRNEFG-VYVDVIKGGVVVETLSSLPLTAS-RSFVLAGRMTPACDLVLQHPSISRVHAALQFDAHGALFLRDMNSTHGTFVNKRRVPP-NEYVRLHIGDVVVFGESTRLYAVCGPPELLPEEYDSENLQQLRAKLAARRERXXXXQRVGTKPPTDDG-----------DGVSWGFREDAEXXXXXXXXXXXXXXGKSATKKRSRASED--LPEYLRGIKESGRNSYESSVREADVGAKDQRLFEQLQ 250          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: A0A6G0RIF9_9STRA (FHA domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RIF9_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.570e-35
Identity = 88/247 (35.63%), Postives = 136/247 (55.06%), Query Frame = 1
Query:   13 KYSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDIT-SEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDDEKLPDYMSEAQRQRRKDTQLGLHEADVVEKDRRLFERLQ 750
            +Y+PP W+     ++  + L+V+KGGV++  + +  ++GR + + GR   V D+ L H S+SR HA LQF + G +F+ D  STHG FVNK    + QEF R+ +GD+L FGESTRLY + GP E+LP EY+S NL + R +  R+ E                               SWGFG+DAE E+         +  +   +E+LPDY+   + +  +  +  + E+ V EKD+RL+++LQ
Sbjct:    3 QYTPPEWSAAG-RNVFGIYLEVIKGGVVVDTLPLPRTDGRSYVVAGRMETVCDLPLAHPSISRVHAALQFDEQGALFLYDARSTHGCFVNKKRVVA-QEFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLDRKREILEEKKQVEDRG------------------ASWGFGDDAEEEEGEQSD----EDDSVKGEEELPDYLRNLKEEEDQPYKSSVSESQVSEKDQRLYQQLQ 225          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: G4ZWG5_PHYSP (FHA domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZWG5_PHYSP)

HSP 1 Score: 137 bits (345), Expect = 5.160e-34
Identity = 86/247 (34.82%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   13 KYSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDIT-SEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDDEKLPDYMSEAQRQRRKDTQLGLHEADVVEKDRRLFERLQ 750
            +Y+PP W+         + L+V+KGGV++  + +  ++GR + + GR + V D+ L H S+SR HA LQF   G +F+ D  STHG FVNK    + ++F R+ +GD+L FGESTRLY + GP E+LP EY+S NL + R +  R+ +                               SWGFGEDA+ E+         +  AA   E+LPDY+   + +  +  +  + ++ V EKD+RL+++LQ
Sbjct:    3 QYTPPEWSASGRNEFG-IYLEVIKGGVVVDTLPLPRTDGRSYVVAGRMKTVCDLPLAHPSISRVHAALQFDDKGALFLFDARSTHGCFVNKKRVVA-EQFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLDRKRQILEKKKQEDRG-------------------ASWGFGEDAQEEEGDDESD---EEDAAKGKEELPDYLRNLKEEEDQPYKSSVSQSQVNEKDQRLYQQLQ 225          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: A0A2P4Y619_9STRA (FHA domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y619_9STRA)

HSP 1 Score: 137 bits (345), Expect = 5.290e-34
Identity = 88/247 (35.63%), Postives = 135/247 (54.66%), Query Frame = 1
Query:   13 KYSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDIT-SEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDDEKLPDYMSEAQRQRRKDTQLGLHEADVVEKDRRLFERLQ 750
            +YSPP W+     ++  + L+V+K GV++ ++ +   +GR + + GR   V D+ L H S+SR HA LQF + G +F+ D+ STHG F+NK    + +EF R+ +GD+L FGESTRLY + GP E+LP EY+S NL + R +  ++ E                               SWGFGEDAE  D         +IV   +D  LPDY+   +  +    +  + ++DV EKD+RL+++LQ
Sbjct:    3 QYSPPEWSTTG-RNVFGIYLEVIKSGVVVDKLQLPIRDGRSYVVAGRMETVCDLALAHPSISRVHAALQFDEQGALFLYDICSTHGCFINKKRVLA-EEFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLEKKREIREKKKEEIEQG------------------ASWGFGEDAEESDEED------EIVENKED--LPDYLRNVKEDQ--PYKSSVSQSDVKEKDQRLYQQLQ 219          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: A0A1V9ZLF0_9STRA (FHA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZLF0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.110e-34
Identity = 77/189 (40.74%), Postives = 111/189 (58.73%), Query Frame = 1
Query:   13 KYSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDITSEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENE 579
            KY PP WAQ    +   + L+V+K GV+L  + + S  + HY+ GR   + D++L+H S+SR HA LQF ++G++FVIDL ST+GT VNK   P   E+ ++RVGD+L FGESTR+Y + GP E++PEEY S NL+ +R + + +                              D +SWGFGEDAE +
Sbjct:  349 KYEPPSWAQGAS-NKHNLSLEVIKSGVVLETIALDS--KSHYVAGRMEPLCDLVLQHPSISRTHAALQFNEEGKLFVIDLKSTYGTHVNKRRLPP-NEYTQLRVGDVLVFGESTRIYTLLGPQELMPEEYISHNLEAMRNKLIEKK----------------------AKKEKECDGISWGFGEDAEED 511          
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Match: A0A0P1B5V4_PLAHL (Anion exchanger adaptor protein Kanadaptin, contains FHA domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5V4_PLAHL)

HSP 1 Score: 137 bits (346), Expect = 8.790e-34
Identity = 96/248 (38.71%), Postives = 132/248 (53.23%), Query Frame = 1
Query:   16 YSPPRWAQPPPLSLSEV---RLQVLKGGVILGEVDIT-SEGRDHYLFGRQRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSWQEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVSWGFGEDAENEDXXXXXXGGRKIVAAGDDEKLPDYMSEAQRQRRKDTQLGLHEADVVEKDRRLFERL 747
            YSPP W+    +S S V    + V+KGGV++  + +  + GR + L GR   V D  L H S+SR HA LQF + G +F+ D+ STHG FVNK   P  +EF R+ +GD+L FGESTRLY + GP E+LP EY+S NL++ R E L+R +                              VSWGF +DAE E+         +     DD  LPDY+   +   R  T   + ++DV EKDRRL+ +L
Sbjct:    4 YSPPEWS----ISGSNVFGIYMDVIKGGVVVESLQLPCTNGRSYVLAGRMATVCDWTLAHPSISRTHAALQFDQQGALFLYDIRSTHGCFVNKKRIPV-EEFVRLHIGDVLGFGESTRLYAVCGPPELLPAEYESLNLEKFR-ERLKRKDDQRE--------------------------VSWGFKDDAEEEEGESE----EETQKRNDD--LPDYLRNLKEDDRPYTS-SVSQSDVNEKDRRLYRQL 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8280.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE72_ECTSI2.260e-4848.78FHA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CFG3_9STRA4.350e-3736.96FHA domain-containing protein n=1 Tax=Tribonema mi... [more]
M4B2V9_HYAAE6.920e-3635.74FHA domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A329RQU1_9STRA1.680e-3536.11FHA domain-containing protein n=2 Tax=Phytophthora... [more]
A0A2D4CB17_PYTIN1.910e-3542.58FHA domain-containing protein n=1 Tax=Pythium insi... [more]
A0A6G0RIF9_9STRA4.570e-3535.63FHA domain-containing protein n=5 Tax=Phytophthora... [more]
G4ZWG5_PHYSP5.160e-3434.82FHA domain-containing protein n=1 Tax=Phytophthora... [more]
A0A2P4Y619_9STRA5.290e-3435.63FHA domain-containing protein n=2 Tax=Phytophthora... [more]
A0A1V9ZLF0_9STRA7.110e-3440.74FHA domain-containing protein n=1 Tax=Thraustothec... [more]
A0A0P1B5V4_PLAHL8.790e-3438.71Anion exchanger adaptor protein Kanadaptin, contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8280contigP-wetherbeei_contig8280:1205..2802 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LE72
Preferred nameSLC4A1AP
PFAMsFHA,dsrm
Model size750
Max annot lvl2759|Eukaryota
KEGG koko:K06091,ko:K08956
KEGG Pathwayko04390,ko04391,ko04530,ko05165,map04390,map04391,map04530,map05165
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005886,GO:0016020,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0071944,GO:0097159,GO:1901363
Exons4
Evalue3.7e-49
EggNOG OGsKOG1881@1|root,KOG1881@2759|Eukaryota
Ec32 ortholog descriptionForkhead-associated (FHA) domain
Ec32 orthologEc-00_001160.1
DescriptionSolute carrier family 4 (anion exchanger), member 1, adaptor protein
Cds size750
COG categoryA
BRITEko00000,ko00001,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187031.113481-CDS-P-wetherbeei_contig8280:1204..14861683187031.113481-CDS-P-wetherbeei_contig8280:1204..1486Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8280 1205..1486 +
1683187031.1341908-CDS-P-wetherbeei_contig8280:1657..18031683187031.1341908-CDS-P-wetherbeei_contig8280:1657..1803Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8280 1658..1803 +
1683187031.1457245-CDS-P-wetherbeei_contig8280:2121..23491683187031.1457245-CDS-P-wetherbeei_contig8280:2121..2349Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8280 2122..2349 +
1683187031.1572597-CDS-P-wetherbeei_contig8280:2708..28021683187031.1572597-CDS-P-wetherbeei_contig8280:2708..2802Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8280 2709..2802 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8280.2.1prot_P-wetherbeei_contig8280.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8280 1205..2802 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8280.2.1

>prot_P-wetherbeei_contig8280.2.1 ID=prot_P-wetherbeei_contig8280.2.1|Name=mRNA_P-wetherbeei_contig8280.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp
MGERKYSPPRWAQPPPLSLSEVRLQVLKGGVILGEVDITSEGRDHYLFGR
QRGVVDILLEHDSVSRQHAVLQFGKDGEIFVIDLGSTHGTFVNKLLFPSW
QEFHRVRVGDILKFGESTRLYIIDGPLEMLPEEYDSENLQRLRTEALRRA
EAMRRKVASGRAGGSGGGSGAAADGGGAADVVSWGFGEDAENEDEEEEGD
GGRKIVAAGDDEKLPDYMSEAQRQRRKDTQLGLHEADVVEKDRRLFERLQ
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mRNA from alignment at P-wetherbeei_contig8280:1205..2802+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8280.2.1 ID=mRNA_P-wetherbeei_contig8280.2.1|Name=mRNA_P-wetherbeei_contig8280.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1598bp|location=Sequence derived from alignment at P-wetherbeei_contig8280:1205..2802+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGAACGCAAATACAGTCCACCGCGATGGGCGCAGCCGCCGCCCCT GAGCCTCTCAGAGGTCCGTCTGCAAGTCCTCAAGGGCGGTGTGATCTTGG GCGAGGTCGACATCACGAGCGAAGGCCGTGACCACTACCTCTTTGGCCGG CAGCGAGGCGTTGTCGACATTCTCCTGGAACACGACTCCGTGTCGCGCCA GCACGCCGTGCTGCAATTCGGCAAAGACGGAGAAATCTTTGTGATCGACC TCGGCAGCACTCACGGCACCTTCGTGAACAAGGTCAAAGTGGCTTCAAAG GCGAGCTTCCAATTATTTTCTCTGTGTAGACAGAAAACTAGAGTGGACAC ACCCACTAATGTTTCCTAAGAGATTCTGTCATGACCCAGGGCATGCAAAT GTCATCCTTTTTATCACTCTGTGAAGAAAGCTGTTTCGTCACCTTATCAC CAGCTACTTTTTCCATCTTGGCAGGAGTTCCATCGGGTCCGCGTCGGCGA CATCTTAAAGTTCGGCGAGTCAACGCGCCTCTACATTATTGATGGCCCGC TTGAGATGCTCCCCGAAGAATACGACAGCGAGAACCTCCAGCGCCTGCGG TGAGAGTTGCAGAGAAGGAACAATAAAAGAAGGGGGAAGGGACGGGTGCC GCTGCTGGTTTGTTGTGAAGGTTTCATGGGTCTCGGGGCATCGATTTAAA CTCGAAGCCGCTGCGTCGCATTCTCGTCCCGGACTGTGCGGTCAAACCTT TTGCGTTGTTTCGGGACCGTTCATGTGTTACAAGCATTATGGCTTCTTTC GCAGGGCAACCTGTACAAGCTTCCGTTAGCTCCAACAAGTTTCGGCCAAA TTAGCTGCGTGATTACGGCGTCGATGCAAATGGCGCATTCCCTCTTTGCC TCTCGCGACGGTGGCAGGACGGAAGCGCTGCGGCGGGCTGAGGCCATGCG ACGAAAGGTGGCGAGTGGCCGCGCCGGCGGCAGCGGCGGTGGCAGCGGCG CGGCGGCCGATGGCGGCGGGGCGGCGGACGTGGTGAGCTGGGGCTTTGGC GAGGACGCTGAAAACGAAGACGAGGAGGAGGAAGGGGATGGCGGCCGCAA GATCGTCGCCGCAGGAGACGATGAAAAGCTGCCCGACTACATGAGGTGCG TTTCTCAGACTTCTTTCCGGGTCTACTTCAAACATGCGTGCAGAAATTGA GATTCGCGCACACTGAGGAGATGTTTGGATCTGGATTAGAACCTTTGAAA TGTGGTTGGGCCTTTTCCACTGTTCTTTAAAGTCAAGATGGCGACTATAG ATGTTTAGATCTGATCTATAGCAATCCTGTCCTTGTTGCAATCTGATGTC CGCCGCTCTCCTTCGCTGTTCCATTCCAAACCACGGACGTAACCTCGGAC CACCTCGAACCCCCTAACACACATCGGCGGGCCGGCGAATGGGCGATTCG GCGGGCGGGCCACTGTCGCGGGTCACGGTTTGTCGGGTTGCGGGCCCCCG GCAGCGAGGCGCAGCGGCAGCGGCGGAAGGATACGCAGCTGGGGCTGCAT GAAGCTGACGTGGTCGAGAAGGACCGGCGGCTCTTTGAGCGGCTGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8280:1205..2802+

>mRNA_P-wetherbeei_contig8280.2.1 ID=mRNA_P-wetherbeei_contig8280.2.1|Name=mRNA_P-wetherbeei_contig8280.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig8280:1205..2802+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGAACGCAAATACAGTCCACCGCGATGGGCGCAGCCGCCGCCCCT
GAGCCTCTCAGAGGTCCGTCTGCAAGTCCTCAAGGGCGGTGTGATCTTGG
GCGAGGTCGACATCACGAGCGAAGGCCGTGACCACTACCTCTTTGGCCGG
CAGCGAGGCGTTGTCGACATTCTCCTGGAACACGACTCCGTGTCGCGCCA
GCACGCCGTGCTGCAATTCGGCAAAGACGGAGAAATCTTTGTGATCGACC
TCGGCAGCACTCACGGCACCTTCGTGAACAAGCTACTTTTTCCATCTTGG
CAGGAGTTCCATCGGGTCCGCGTCGGCGACATCTTAAAGTTCGGCGAGTC
AACGCGCCTCTACATTATTGATGGCCCGCTTGAGATGCTCCCCGAAGAAT
ACGACAGCGAGAACCTCCAGCGCCTGCGGACGGAAGCGCTGCGGCGGGCT
GAGGCCATGCGACGAAAGGTGGCGAGTGGCCGCGCCGGCGGCAGCGGCGG
TGGCAGCGGCGCGGCGGCCGATGGCGGCGGGGCGGCGGACGTGGTGAGCT
GGGGCTTTGGCGAGGACGCTGAAAACGAAGACGAGGAGGAGGAAGGGGAT
GGCGGCCGCAAGATCGTCGCCGCAGGAGACGATGAAAAGCTGCCCGACTA
CATGAGCGAGGCGCAGCGGCAGCGGCGGAAGGATACGCAGCTGGGGCTGC
ATGAAGCTGACGTGGTCGAGAAGGACCGGCGGCTCTTTGAGCGGCTGCAG
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