prot_P-wetherbeei_contig8278.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8278.1.1
Unique Nameprot_P-wetherbeei_contig8278.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length153
Homology
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 7.160e-48
Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 0
Query:   11 LSTAASTGAFAPRLATRGHAVARGLLHQCRMSSVPAETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE---PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            LS A  T +  P+ A R     R ++    M S  A T  + A  AP GE+TEL+RLEIRIGKIVEI RHPDA++LYVEKV++G+ E   PRTIVSGLVNFC E  LL RDVVVLCNLKP  M+G+TSAGMLLC SN+DH+KV+PL
Sbjct:   43 LSRARLTSSVRPQAALRRPTAVRTMM----MMSDAAVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPL 184          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.720e-44
Identity = 91/169 (53.85%), Postives = 111/169 (65.68%), Query Frame = 0
Query:    4 LFQKVLLLSTAASTGAFAPRLATRGHAVARG-----LLHQCRMS---------SVPAETGSDVAAPA----PAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            L ++V  LS  A   AFAP   +R  A+ARG     + H    S         S  A T    AA A    P G++TEL+RLE+R+G+IVEIGRHPDA+ LYVEK+++GEP  PRTIVSGLV +CSE  LLNRDVV+L NLKP  MRG+ SAGM+LC SN DHT+V PL
Sbjct:    3 LSRQVFALSALAGASAFAPAAVSRA-AMARGRSCYHVQHHLARSVNKGWAMQMSTEASTEEGAAAAAEPAAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIGEPAGPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPL 170          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 147 bits (371), Expect = 1.500e-41
Identity = 71/93 (76.34%), Postives = 80/93 (86.02%), Query Frame = 0
Query:   61 VTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            +TELSRLEIR+GK+VE  RHPDA+ LYVEKV+VGE EPRTIVSGLVNF S+E+L  R V+VLCNLKP  MRGI S GMLLC SN+DHTKVDPL
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVGEDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPL 160          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 147 bits (370), Expect = 3.030e-41
Identity = 84/175 (48.00%), Postives = 109/175 (62.29%), Query Frame = 0
Query:    1 MRVLFQKVLLLSTAASTGAFAP------------RLATRGHAVARGLL--HQCRMSSV--------PAETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            M  +F    +  TA+S  AFAP              A +G +  + ++  H+C  S++        P +T +   A APAGE+ E SRLEIR+GKIV++  HPDA+ LYVEK++ GE EPRTIVSGLV +   E LL+R VVVL NLKP  MRGITS GMLLC SN+DH++V PL
Sbjct:    1 MHAIFTAAFIAGTASSAFAFAPVQHFRPTISSLQAHAPKGFSGIQHIMMPHRCSSSALFNAPEVSEPVDTDAKEEAAAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCGEDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPL 175          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A482SMD4_9ARCH (tRNA-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMD4_9ARCH)

HSP 1 Score: 139 bits (350), Expect = 6.380e-39
Identity = 69/114 (60.53%), Postives = 87/114 (76.32%), Query Frame = 0
Query:   38 QCRMSSVPAETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKV 150
            +C  +S   ET    A P  A + ++LS +EIR+GKIVEIG+HP+A++LYVEKV++GE   PRTIVSGLV FC+ E LLNR V VLCNLKP +++G+TS GMLLC SN DHTKV
Sbjct:   62 RCSSTSQTIETKPPSAPPVVAAKASDLSLMEIRVGKIVEIGKHPEADSLYVEKVDIGETTGPRTIVSGLVAFCAVEDLLNRKVTVLCNLKPRSLKGVTSYGMLLCASNADHTKV 175          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 142 bits (357), Expect = 6.570e-39
Identity = 73/120 (60.83%), Postives = 87/120 (72.50%), Query Frame = 0
Query:   42 SSVPAETGSDVAAPAPAGE--------VTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            SS    T +   APA  G+        +TELSRLEIR+GKI+E  +HPDA+ LYVEKV+VGE EPRTIVSGLV +   E+++ R VVVLCNLKP  MRG+TS GMLLC SN+DHT VDPL
Sbjct:   88 SSTSFTTVATAQAPAAVGDGDSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVGEEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPL 207          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 6.850e-39
Identity = 65/95 (68.42%), Postives = 83/95 (87.37%), Query Frame = 0
Query:   60 EVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            E+TELSRLEIR+GKIVE+GRHP+A+ LYVEK+++GEP  PRTIVSGLV FC+ ++LLN +V+VLCNLKP  ++GITS GM+LC ++ D TKVDPL
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLGEPTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPL 145          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S1TKX4_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TKX4_9RHOD)

HSP 1 Score: 140 bits (353), Expect = 9.350e-38
Identity = 76/130 (58.46%), Postives = 93/130 (71.54%), Query Frame = 0
Query:   27 RGHAVARGLLHQCRMS--SVPA-ETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            R HA++ G +         VPA E G D    AP   VTE SRLEIR+G+I+E  +HPDA+ LYVEKV+VGEPE RTIVSGLV +   ++++ R VVVLCNLKP  MRG+TS GMLLC SN+DHT+VDPL
Sbjct:  136 RTHAISGGEIDAVGQDPVGVPAGEGGVDSGNDAP---VTEFSRLEIRVGRILECEKHPDADTLYVEKVDVGEPETRTIVSGLVKYVPLDEMIGRTVVVLCNLKPRAMRGVTSFGMLLCASNEDHTEVDPL 262          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.480e-37
Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 0
Query:   47 ETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            ETG  V AP   GE+TELSRLEIR GKI+EI RHP+A+ LYVEK+++GE + PRTIVSGLV + +EE+LL R+VVVL NLKP  ++GITS GMLLC SN+DHT V PL
Sbjct:  185 ETGKVVEAPK--GELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEADGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPL 290          
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S0FZY8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY8_9RHOD)

HSP 1 Score: 137 bits (344), Expect = 7.540e-37
Identity = 72/123 (58.54%), Postives = 89/123 (72.36%), Query Frame = 0
Query:   35 LLHQCRMSSVPAET----GSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 153
            LL +   +++ AET    G++    A    +TELSRLEIR G +V+  +HP+A+ LYVE ++VGE EPRTIVSGLV F SEE+L  R VVVLCNLKP TMRGI S GMLLC SN DH++VDPL
Sbjct:   96 LLSRASFTTMSAETPESAGAESEKQAEDLPLTELSRLEIRAGTVVQCKKHPEADTLYVETIDVGEQEPRTIVSGLVKFLSEEELTGRRVVVLCNLKPRTMRGIISQGMLLCASNADHSEVDPL 218          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI7.160e-4860.96Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA5.720e-4453.85Endothelial monocyte-activating polypeptide II pro... [more]
A0A7S0ZE83_9RHOD1.500e-4176.34Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S2V4I0_9STRA3.030e-4148.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482SMD4_9ARCH6.380e-3960.53tRNA-binding domain-containing protein n=1 Tax=arc... [more]
A0A2V3IUX7_9FLOR6.570e-3960.83Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S0XDL6_9STRA6.850e-3968.42Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S1TKX4_9RHOD9.350e-3858.46Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
W7U6C4_9STRA4.480e-3766.67Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S0FZY8_9RHOD7.540e-3758.54Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 63..153
e-value: 6.0E-36
score: 125.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 64..148
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 69..149
e-value: 7.7E-29
score: 99.7
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 63..153
score: 27.97711
NoneNo IPR availablePANTHERPTHR11586:SF39TYROSINE--TRNA LIGASE, CYTOPLASMICcoord: 53..153
NoneNo IPR availablePANTHERPTHR11586TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBERcoord: 53..153
NoneNo IPR availableCDDcd02799tRNA_bind_EMAP-II_likecoord: 65..153
e-value: 2.87566E-48
score: 149.301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8278contigP-wetherbeei_contig8278:2..1027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8278.1.1mRNA_P-wetherbeei_contig8278.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8278 2..1027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8278.1.1 ID=prot_P-wetherbeei_contig8278.1.1|Name=mRNA_P-wetherbeei_contig8278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
MRVLFQKVLLLSTAASTGAFAPRLATRGHAVARGLLHQCRMSSVPAETGS
DVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRT
IVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKV
DPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR002547tRNA-bd_dom