mRNA_P-wetherbeei_contig8278.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI) HSP 1 Score: 164 bits (415), Expect = 7.160e-48 Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 1
Query: 31 LSTAASTGAFAPRLATRGHAVARGLLHQCRMSSVPAETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE---PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
LS A T + P+ A R R ++ M S A T + A AP GE+TEL+RLEIRIGKIVEI RHPDA++LYVEKV++G+ E PRTIVSGLVNFC E LL RDVVVLCNLKP M+G+TSAGMLLC SN+DH+KV+PL
Sbjct: 43 LSRARLTSSVRPQAALRRPTAVRTMM----MMSDAAVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPL 184
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.720e-44 Identity = 91/169 (53.85%), Postives = 111/169 (65.68%), Query Frame = 1
Query: 10 LFQKVLLLSTAASTGAFAPRLATRGHAVARG-----LLHQCRMS---------SVPAETGSDVAAPA----PAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
L ++V LS A AFAP +R A+ARG + H S S A T AA A P G++TEL+RLE+R+G+IVEIGRHPDA+ LYVEK+++GEP PRTIVSGLV +CSE LLNRDVV+L NLKP MRG+ SAGM+LC SN DHT+V PL
Sbjct: 3 LSRQVFALSALAGASAFAPAAVSRA-AMARGRSCYHVQHHLARSVNKGWAMQMSTEASTEEGAAAAAEPAAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIGEPAGPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPL 170
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD) HSP 1 Score: 147 bits (371), Expect = 1.500e-41 Identity = 71/93 (76.34%), Postives = 80/93 (86.02%), Query Frame = 1
Query: 181 VTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
+TELSRLEIR+GK+VE RHPDA+ LYVEKV+VGE EPRTIVSGLVNF S+E+L R V+VLCNLKP MRGI S GMLLC SN+DHTKVDPL
Sbjct: 68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVGEDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPL 160
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.030e-41 Identity = 84/175 (48.00%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 1 MRVLFQKVLLLSTAASTGAFAP------------RLATRGHAVARGLL--HQCRMSSV--------PAETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
M +F + TA+S AFAP A +G + + ++ H+C S++ P +T + A APAGE+ E SRLEIR+GKIV++ HPDA+ LYVEK++ GE EPRTIVSGLV + E LL+R VVVL NLKP MRGITS GMLLC SN+DH++V PL
Sbjct: 1 MHAIFTAAFIAGTASSAFAFAPVQHFRPTISSLQAHAPKGFSGIQHIMMPHRCSSSALFNAPEVSEPVDTDAKEEAAAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCGEDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPL 175
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A482SMD4_9ARCH (tRNA-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMD4_9ARCH) HSP 1 Score: 139 bits (350), Expect = 6.380e-39 Identity = 69/114 (60.53%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 112 QCRMSSVPAETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKV 450
+C +S ET A P A + ++LS +EIR+GKIVEIG+HP+A++LYVEKV++GE PRTIVSGLV FC+ E LLNR V VLCNLKP +++G+TS GMLLC SN DHTKV
Sbjct: 62 RCSSTSQTIETKPPSAPPVVAAKASDLSLMEIRVGKIVEIGKHPEADSLYVEKVDIGETTGPRTIVSGLVAFCAVEDLLNRKVTVLCNLKPRSLKGVTSYGMLLCASNADHTKV 175
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR) HSP 1 Score: 142 bits (357), Expect = 6.570e-39 Identity = 73/120 (60.83%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 124 SSVPAETGSDVAAPAPAGE--------VTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
SS T + APA G+ +TELSRLEIR+GKI+E +HPDA+ LYVEKV+VGE EPRTIVSGLV + E+++ R VVVLCNLKP MRG+TS GMLLC SN+DHT VDPL
Sbjct: 88 SSTSFTTVATAQAPAAVGDGDSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVGEEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPL 207
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA) HSP 1 Score: 140 bits (352), Expect = 6.850e-39 Identity = 65/95 (68.42%), Postives = 83/95 (87.37%), Query Frame = 1
Query: 178 EVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
E+TELSRLEIR+GKIVE+GRHP+A+ LYVEK+++GEP PRTIVSGLV FC+ ++LLN +V+VLCNLKP ++GITS GM+LC ++ D TKVDPL
Sbjct: 51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLGEPTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPL 145
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S1TKX4_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TKX4_9RHOD) HSP 1 Score: 140 bits (353), Expect = 9.350e-38 Identity = 76/130 (58.46%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 79 RGHAVARGLLHQCRMS--SVPA-ETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
R HA++ G + VPA E G D AP VTE SRLEIR+G+I+E +HPDA+ LYVEKV+VGEPE RTIVSGLV + ++++ R VVVLCNLKP MRG+TS GMLLC SN+DHT+VDPL
Sbjct: 136 RTHAISGGEIDAVGQDPVGVPAGEGGVDSGNDAP---VTEFSRLEIRVGRILECEKHPDADTLYVEKVDVGEPETRTIVSGLVKYVPLDEMIGRTVVVLCNLKPRAMRGVTSFGMLLCASNEDHTEVDPL 262
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.480e-37 Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 1
Query: 139 ETGSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPE-PRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
ETG V AP GE+TELSRLEIR GKI+EI RHP+A+ LYVEK+++GE + PRTIVSGLV + +EE+LL R+VVVL NLKP ++GITS GMLLC SN+DHT V PL
Sbjct: 185 ETGKVVEAPK--GELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEADGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPL 290
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Match: A0A7S0FZY8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY8_9RHOD) HSP 1 Score: 137 bits (344), Expect = 7.540e-37 Identity = 72/123 (58.54%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 103 LLHQCRMSSVPAET----GSDVAAPAPAGEVTELSRLEIRIGKIVEIGRHPDAEALYVEKVNVGEPEPRTIVSGLVNFCSEEQLLNRDVVVLCNLKPATMRGITSAGMLLCLSNDDHTKVDPL 459
LL + +++ AET G++ A +TELSRLEIR G +V+ +HP+A+ LYVE ++VGE EPRTIVSGLV F SEE+L R VVVLCNLKP TMRGI S GMLLC SN DH++VDPL
Sbjct: 96 LLSRASFTTMSAETPESAGAESEKQAEDLPLTELSRLEIRAGTVVQCKKHPEADTLYVETIDVGEQEPRTIVSGLVKFLSEEELTGRRVVVLCNLKPRTMRGIISQGMLLCASNADHSEVDPL 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8278.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8278.1.1 >prot_P-wetherbeei_contig8278.1.1 ID=prot_P-wetherbeei_contig8278.1.1|Name=mRNA_P-wetherbeei_contig8278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp MRVLFQKVLLLSTAASTGAFAPRLATRGHAVARGLLHQCRMSSVPAETGSback to top mRNA from alignment at P-wetherbeei_contig8278:2..1027- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8278.1.1 ID=mRNA_P-wetherbeei_contig8278.1.1|Name=mRNA_P-wetherbeei_contig8278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig8278:2..1027- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8278:2..1027- >mRNA_P-wetherbeei_contig8278.1.1 ID=mRNA_P-wetherbeei_contig8278.1.1|Name=mRNA_P-wetherbeei_contig8278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig8278:2..1027- (Phaeothamnion wetherbeei SAG_119_79)back to top |