mRNA_P-wetherbeei_contig8269.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: A0A7S4D4Y2_HETAK (DNA helicase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Y2_HETAK) HSP 1 Score: 108 bits (271), Expect = 4.250e-25 Identity = 57/131 (43.51%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 52 QARGNIFLDASGLENRCTGCGVTQVNPAALKAHPFLKPGPPICKECIDVYNDGTFT-DEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEECVAADE-DG---WKCYVCNPKPLESLVAA 429
QA G+ + GL CT CG + H P+CK C+D YN G FT DE G E+YCR+CGDGGD++ CD +CP FC+ CV RNFGP E + DG W CYVC+ + L +L A
Sbjct: 186 QAAGDGDGPSPGLAFLCTACGAKLEKGRRTQRHLHPLLDMPVCKTCLDTYNFGEFTIDEDGKEMYCRWCGDGGDIFPCD----RCPKGFCRACVERNFGPREVERIESLDGAASWACYVCDREALNALKDA 312
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: UPI000BA80D70 (transcriptional regulator ATRX-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA80D70) HSP 1 Score: 103 bits (257), Expect = 2.680e-22 Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 1
Query: 100 CTGCG--VTQVNPAALKAHPFLKPGPPICKECIDVYNDGTFT-DEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEECVAADE-DGWKCYVCNPKPLESLVA 426
CT CG V ++PA +K H +K G +C++C Y GTF DE GV+ YCR+C +GG+L CD C +FCK C+ RNFG E A E W+CYVCN +PL LV+
Sbjct: 85 CTACGNQVNHLDPAEVKRH--IKLGVLLCRKCFKYYGSGTFQKDENGVDEYCRWCAEGGNLIICD----FCENAFCKECIRRNFGRRELTKATEATRWQCYVCNSEPLFGLVS 191
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: UPI000BA81622 (transcriptional regulator ATRX-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA81622) HSP 1 Score: 102 bits (254), Expect = 6.620e-22 Identity = 55/130 (42.31%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 52 QARGNIFL-DASGLENRCTGCG--VTQVNPAALKAHPFLKPGPPICKECIDVYNDGTFT-DEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEECVAAD-EDGWKCYVCNPKPLESLVA 426
Q R I + D + ++ CT CG + N + +K H L+ +CK+C Y G F DE GV+ YCR+CGDGG+L CD C +FCK C+ RNFGP E A W+CYVCN +PL LV+
Sbjct: 21 QPRSKISVEDIAVMKVTCTACGNQINHYNASEIKCHIHLRVL--MCKKCFKYYGAGIFQKDETGVDEYCRWCGDGGNLILCD----FCENAFCKECINRNFGPSELSKATVAASWQCYVCNSEPLSGLVS 144
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: A0A8J5AA32_9CHEL (DNA helicase n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5AA32_9CHEL) HSP 1 Score: 99.4 bits (246), Expect = 7.680e-21 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 100 CTGCG--VTQVNPAALKAHPFLKPGPPICKECIDVYNDGTFT-DEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEECV-AADEDGWKCYVCNPKPLESLV 423
CT CG + A +HP LK ICK+C Y+ G F+ DE G++ +CR+C +GG+L CD C FCKNC+ RNFG +E D + WKCYVCNPK L LV
Sbjct: 137 CTSCGNQINHYQKGACLSHPALKVL--ICKKCYRFYDHGLFSQDENGLDEFCRWCAEGGNLICCD----YCHNGFCKNCLRRNFGRKEISNITDSEKWKCYVCNPKKLIPLV 242
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: A0A8J4ZJ43_9CHEL (DNA helicase n=5 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZJ43_9CHEL) HSP 1 Score: 99.4 bits (246), Expect = 7.700e-21 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 100 CTGCG--VTQVNPAALKAHPFLKPGPPICKECIDVYNDGTFT-DEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEECV-AADEDGWKCYVCNPKPLESLV 423
CT CG + A +HP LK ICK+C Y+ G F+ DE G++ +CR+C +GG+L CD C FCKNC+ RNFG +E D + WKCYVCNPK L LV
Sbjct: 113 CTSCGNQINHYQKGACLSHPALKVL--ICKKCYRFYDHGLFSQDENGLDEFCRWCAEGGNLICCD----YCHNGFCKNCLRRNFGRKEISNITDSEKWKCYVCNPKKLIPLV 218
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: UPI00193C8B48 (transcriptional regulator ATRX-like n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193C8B48) HSP 1 Score: 98.2 bits (243), Expect = 1.030e-20 Identity = 58/135 (42.96%), Postives = 72/135 (53.33%), Query Frame = 1
Query: 70 FLDASGLENRCTGCGVTQVNPAALKA-----HPFLKPGPPICKECIDVYNDGTFT-DEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGP---EECVAADEDGWKCYVCNPKPLESLVAAFKAART 447
F D + +CT C V + P L H FLK +CK+C+D Y DG F+ DE G E YCR+CG GG+L+ C+ KC FCK CV RNF EE A D W C++CNP PL L A AA +
Sbjct: 32 FEDTKDKQLKCTVCSVN-LTPFILAGKSCHLHSFLKVL--VCKKCLDFYGDGDFSVDEDGDEKYCRWCGQGGNLFLCE----KCNSGFCKACVKRNFNRDVFEELKALDN--WDCFMCNPNPLYELRAKAWAAES 157
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: A0A7R8UIK3_HERIL (DNA helicase n=3 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8UIK3_HERIL) HSP 1 Score: 96.3 bits (238), Expect = 9.360e-20 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 100 CTGCGV----TQVNPAALKAHPFLKPGPPICKECIDVYNDGTFTD-EKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEECV--AADEDGWKCYVCNPKPLESLVA 426
CT CGV N + ++ HP LK CK+C + YN G F+ E G E+YCR+CG GG+++ C KCPY FC NC+++N ++CV + + W C+VC PK + L A
Sbjct: 43 CTVCGVHIGTAPANESVIRMHPILKVTH--CKKCHEFYNSGEFSKGEDGSELYCRWCGQGGEVYCCS----KCPYVFCTNCIVQNLS-KDCVNDIEENENWNCFVCAPKIMWHLRA 151
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: A0A8B7NQ54_HYAAZ (DNA helicase n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NQ54_HYAAZ) HSP 1 Score: 96.3 bits (238), Expect = 1.010e-19 Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 1
Query: 28 KESFLMDRQARGNIFLDASGLENRCTGCGVTQVN---PAALKAHPFLKPGPPICKECIDVYNDGTFT-DEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEECVAADEDG-WKCYVCNPKPLESLVAAFKA 438
KE L +RQ++ + RCTGC QVN PA + HP L G +CK C Y GT+ D++G++ YCR+C +GGDL CD C FCK C+ RNFG + W+CYVCN KPL L +A
Sbjct: 593 KEDKLFERQSK-ELLEKMQTCLPRCTGCN-EQVNHKMPALVFTHPIL--GVLLCKRCRKFYGKGTWKKDKEGLDEYCRWCANGGDLMLCD----FCTNGFCKPCLRRNFGRSAIRDVGRNKKWECYVCNMKPLTDLRLQHRA 726
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: A0A2D0RG18_ICTPU (DNA helicase n=3 Tax=Ictalurus punctatus TaxID=7998 RepID=A0A2D0RG18_ICTPU) HSP 1 Score: 95.9 bits (237), Expect = 1.330e-19 Identity = 47/115 (40.87%), Postives = 66/115 (57.39%), Query Frame = 1
Query: 100 CTGCG--VTQVNPAALKAHPFLKPGPPICKECIDVY-NDGTFTDEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEEC--VAADEDGWKCYVCNPKPLESLVAA 429
CT CG V ++ HP LK +CK C Y +D D+ G++ CR+C +GG+L CD C +FCK C+LRN G +E + D+D W+CYVC P+PL+ +VAA
Sbjct: 165 CTACGQQVNHFQRDSVYQHPILKVL--LCKSCFKYYTSDDISKDDDGMDEQCRWCAEGGNLLCCD----YCSNAFCKTCILRNLGRKELSGIMNDDDKWRCYVCQPEPLQDVVAA 273
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Match: A0A7J6AS03_AMEME (DNA helicase n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6AS03_AMEME) HSP 1 Score: 95.9 bits (237), Expect = 1.340e-19 Identity = 47/115 (40.87%), Postives = 66/115 (57.39%), Query Frame = 1
Query: 100 CTGCG--VTQVNPAALKAHPFLKPGPPICKECIDVY-NDGTFTDEKGVEIYCRFCGDGGDLWACDNPNGKCPYSFCKNCVLRNFGPEEC--VAADEDGWKCYVCNPKPLESLVAA 429
CT CG V ++ HP LK +CK C Y +D D+ G++ CR+C +GG+L CD C +FCK C+LRN G +E + D+D W+CYVC P+PL+ +VAA
Sbjct: 165 CTACGQQVNHFQRDSVYQHPILKVL--LCKSCFKYYTSDDISKDDDGMDEQCRWCAEGGNLLCCD----YCSNAFCKTCILRNLGRKELSGIMNDDDKWRCYVCQPEPLQDVVAA 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8269.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8269.1.3 >prot_P-wetherbeei_contig8269.1.3 ID=prot_P-wetherbeei_contig8269.1.3|Name=mRNA_P-wetherbeei_contig8269.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=186bp REVKKGSGTKESFLMDRQARGNIFLDASGLENRCTGCGVTQVNPAALKAHback to top mRNA from alignment at P-wetherbeei_contig8269:642..2491- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8269.1.3 ID=mRNA_P-wetherbeei_contig8269.1.3|Name=mRNA_P-wetherbeei_contig8269.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1850bp|location=Sequence derived from alignment at P-wetherbeei_contig8269:642..2491- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8269:642..2491- >mRNA_P-wetherbeei_contig8269.1.3 ID=mRNA_P-wetherbeei_contig8269.1.3|Name=mRNA_P-wetherbeei_contig8269.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=558bp|location=Sequence derived from alignment at P-wetherbeei_contig8269:642..2491- (Phaeothamnion wetherbeei SAG_119_79)back to top |