mRNA_P-wetherbeei_contig8263.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: D8LFB8_ECTSI (Protein SDA1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFB8_ECTSI) HSP 1 Score: 195 bits (496), Expect = 1.970e-49 Identity = 189/535 (35.33%), Postives = 238/535 (44.49%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEEGRLQPEEDGESGGDDG--------------------ESGSDADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGGGQSSGIEAGQDGWVECSDDDENGDDESGWVDASDAEDDVGAKSPASAAAKRSKKG----SDTVVGEATGADGEAAPAADDAPPELVPLSEVAALEAKAASATVAAAAADSGSVAPAEKVTFAADTADGASSXXXXAAARDAAAASCKRQRPDMARVLTAEDFALIKRLKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFAVEPSALEGYKKRRRATLEERLESVIRGREKFEANSHGGGLTNLEKARKKNFLMVRKGQRVRSKT--SGKQVRTRDNKGKKI-LGRDKRKKRRV 2026
DE++PV+KAVA+NF+TERC G+V A+G+N++REV RR+PALL E L V+L+ +K DKSVVVAARG +N VRE +P+LL+ +DRGR HD T RPA+YG V GVDGA+LL +E+G + E+D E G + +G XXXXXXXXXXXXXXX GG G E GQ KKG S+T V + G +G P P VPL RQR D R+L+AEDF IK+LK A +SF+V+P ALEGY+KRRRATLEERLE VIRGREKF+ANSH GGLTN EK RKKN+LM+RKG+ V+ KT KQV + N+G K+ + R+K+KK+R
Sbjct: 374 DEVMPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVVDLAAYSKHADKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGADLLTLHEQGLMPLEKDDXXXXXXXXXXXXXXXXXEEVPQLVSMPEDGMEVEGVEEXXXXXXXXXXXXXXXRPSKRARVSD------KGGKGKKGEEEGQG----------------------------------------RKKGVNFTSETKVADGPGPNGPVDPG----PTTKVPL-----------------------------------------------------------RQRVDSTRILSAEDFEKIKKLKHQAATAAKQRTHKRKHNIGGSDSEDSDDGGEEG---------------------------------QSFSVDPRALEGYRKRRRATLEERLEGVIRGREKFQANSHAGGLTNAEKERKKNYLMIRKGKAVKHKTRMGEKQVMAQKNRGGKVQMSRNKQKKKRT 766
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: A0A835Z7A4_9STRA (Protein SDA1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A4_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.530e-43 Identity = 160/519 (30.83%), Postives = 202/519 (38.92%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEEGRLQPEEDGESGGDDGESGSDADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGGGQSSGIEAGQDGWVECSDDDENGDDESGWVDASDAEDDVGAKSPASAAAKRSKKGSDTVVGEATGADGEAAPAADDAPPELVPLSEVAALEAKAASATVAAAAADSGSVAPAEKVTFAADTADGASSXXXXAAARDAAAASCKRQRPDMARVLTAEDFALIKRLKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFAVEPSALEGYKKRRRATLEERLESVIRGREKFEANSHGGGLTNLEKARKKNFLMVRKGQRVRSKTSGKQVR----TRDNKG------KKI-LGRDKRKKRRV 2026
D++LP++KA+AHN +TERCSGDV AVG+N+++E++RRVPA L E A +++ KSRDKSVV+AARG NLVRE+HP LLR +DRG+ HD + +PA+YGE +VL GVDGAELL + G LQ ++GE +DG + L ++ ++ R D R+LT EDF IK+LKA A S AV + LEGYKKRRRATLEERLESV++GREKFE N+HGGGLTN EK RKKNFLMVRKG+ +R K +QVR R KG KK+ L DKRKKRR
Sbjct: 372 DDILPIIKAIAHNMVTERCSGDVMAVGINSIKEIIRRVPATLSEDGMDAFAQDIAAYAKSRDKSVVIAARGFTNLVREVHPRLLRARDRGKHHDISAQPAQYGEQKVLEGVDGAELLTLADAGILQGADEGEKEEEDGME----------------------------------------------------------------------------------------------------------------------------MDLRKIQVIQ----------------------------------------------------TMRADATRILTQEDFDKIKKLKAKAAEQRLDPRFRRKRKSTAQDVLSDDEEEMDTNP--------------------------------SLAVNAADLEGYKKRRRATLEERLESVLKGREKFEQNTHGGGLTNTEKQRKKNFLMVRKGRNLREKQK-EQVRGGVAKRGPKGAKGQQQKKVQLKHDKRKKRRT 681
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: A0A5D6XJK4_9STRA (Protein SDA1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJK4_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.170e-32 Identity = 75/130 (57.69%), Postives = 96/130 (73.85%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEE-GRLQPEE 889
+ELLP++K++AHNFITERCS +V AVG+NAVREV RRVP +L L +L +KSRDKS V+AARGVLNL+RE+HPTLL+ K+RG+ HD T +P ++GE+ GVDG ELL+ E GR EE
Sbjct: 369 EELLPLVKSIAHNFITERCSSEVIAVGINAVREVFRRVPLVLECEGMDVLIADLIMYSKSRDKSAVMAARGVLNLIREIHPTLLKRKERGKFHDGTAKPKQFGELVAAEGVDGVELLEEAEAAGRFDGEE 498
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: A0A024UGF4_9STRA (Protein SDA1 n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024UGF4_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.520e-31 Identity = 77/150 (51.33%), Postives = 105/150 (70.00%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELL-QAYEEGRLQPEEDGESGGDDGE---SGSDADG 940
+EL+PV+K +A++FI ERC+ +V AVG+NAVREV RVP ++ EP L +L KSRDK+ V+AARGVLNL+RE+HP+LL+ KDRG+ H+ T RP +GE R GVDGAELL +A GR E++G+ D E +G ++DG
Sbjct: 367 EELMPVVKTIANSFIVERCASEVIAVGINAVREVFARVPLVMDEPGMDDLIQDLIMFNKSRDKTCVIAARGVLNLIREIHPSLLKRKDRGKFHNETARPKAFGEYRAAEGVDGAELLMEAEAAGRFDYEDNGDGWAVDEEMLDAGDESDG 516
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: A0A067C678_SAPPC (Protein SDA1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C678_SAPPC) HSP 1 Score: 141 bits (356), Expect = 1.970e-31 Identity = 69/134 (51.49%), Postives = 95/134 (70.90%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEEGRLQPEEDGESG 904
+E++P+++ +A++FI ERCS +V AVG+N+VRE+ R+P ++ E L +L KSRDK+ V+AARGVLNLVRE+HP+LL+ KDRG+ HDA RP +GE+R L GV+GAELL E EED E G
Sbjct: 367 EEIMPIVRTIANSFIVERCSSEVIAVGINSVREIFARIPLVMEEEGMDALLQDLIMFNKSRDKTTVIAARGVLNLVRELHPSLLKRKDRGKFHDAAARPKAFGELRALEGVEGAELLMQAEAAGRFDEEDNEDG 500
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: A0A2P4WVK5_9STRA (Protein SDA1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVK5_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.660e-31 Identity = 71/146 (48.63%), Postives = 100/146 (68.49%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEEGRLQPEEDGESGGDDGESGSDADG 940
+ELLP++K++AHNF+TERCS +V AVG+N++RE+ RRVP LL L +L ++RDK++V+AARGVLNL+R++HP LL+ KDRG+ H+ +P R+GE+ GVDGA+LL E ED + G + S SD DG
Sbjct: 88 EELLPIVKSIAHNFVTERCSSEVIAVGINSLRELFRRVPLLLECEGMDVLVSDLVQYNRARDKTIVMAARGVLNLIRDIHPALLKRKDRGKFHNDAAKPHRFGELVASEGVDGADLLAEAEAAGRFDGEDNKDGWEVASSTSDEDG 233
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: A0A6G0X6R3_9STRA (Protein SDA1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6R3_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.870e-31 Identity = 73/145 (50.34%), Postives = 100/145 (68.97%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEEGRLQPEEDGESGGDDGESGSDAD 937
+E++PV+K +A++FI ERCS +V AVG+NAVRE+ RVP ++ E L +L KSRDK+ V+AARGVLNL+RE+HP+LL+ KDRG+ H+ T RP +GE+R L GV+GAELL +Q E G G+D + G D D
Sbjct: 367 EEIMPVVKTIANSFIVERCSSEVIAVGINAVREIFARVPLVMEEDGMDALIQDLIMFNKSRDKTCVIAARGVLNLIREVHPSLLKRKDRGKFHNETARPKAFGELRALEGVEGAELL-------MQAEAAGRFDGEDNQDGWDID 504
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: I2CP60_NANGC (Protein SDA1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP60_NANGC) HSP 1 Score: 136 bits (343), Expect = 1.980e-30 Identity = 69/149 (46.31%), Postives = 103/149 (69.13%), Query Frame = 2
Query: 434 NSQRITLPMMLMPTGSVLFFPKQDELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEEGRLQ 880
N Q +T + + G P +E+ P+LK +A+ F+ +RCS +V AVG+NA+RE++ RVPA+L E + +++ K +DKS+V+AAR LN VR+++P LL+ KDRG+ H +PA YGE++VL GV+GAELLQA+EEGRL+
Sbjct: 368 NQQHVTKTLAYLIQGCHDLIPP-EEIHPLLKNIANAFVADRCSSEVIAVGINALREIITRVPAVLHEEEMDAFVQDIALYYKKKDKSIVMAARSFLNAVRDLYPALLQRKDRGKHHIVGQKPAPYGELKVLDGVEGAELLQAWEEGRLE 515
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: F0WX60_9STRA (Protein SDA1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX60_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.000e-30 Identity = 79/146 (54.11%), Postives = 100/146 (68.49%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYE-EGRLQPEEDGESGGDDGESGSDAD 937
DE+L V+K++A NFITERCS +V AVG+NA+RE+ RRVP LL D + +L +K++DK VV+AARGVLNL+RE HPTLLR KDRG+ HD RP +GE + VDGAELL A E GR ED G++GSD+D
Sbjct: 370 DEVLQVVKSIATNFITERCSSEVIAVGINALREIFRRVPLLLECEDMEVFTSDLIMYSKAKDKGVVMAARGVLNLIRECHPTLLRRKDRGKHHDRAARPRPFGESTAVESVDGAELLAAAEASGRFSNVEDSLEV-KSGKNGSDSD 514
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Match: A0A485LNP1_9STRA (Protein SDA1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNP1_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.020e-30 Identity = 70/134 (52.24%), Postives = 94/134 (70.15%), Query Frame = 2
Query: 503 DELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVRRVPALLWEPDFQPLAVELSGMTKSRDKSVVVAARGVLNLVREMHPTLLRGKDRGRAHDATTRPARYGEVRVLGGVDGAELLQAYEEGRLQPEEDGESG 904
+E++PV+K +A++FI ERC+ +V AVG+N+VRE+ RVP ++ E L +L KSRDK+ V+AARGVLNL+RE+HP+LL+ KDRG+ H+ T RP +GEVR L GVDGAELL E ED E G
Sbjct: 367 EEIMPVVKTIANSFIVERCASEVIAVGINSVREIFARVPLVMEEDGMDALLQDLIMFNKSRDKTCVIAARGVLNLIREIHPSLLKRKDRGKFHNETARPKAFGEVRALEGVDGAELLMEAEAAGRFDNEDIEDG 500 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8263.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8263.1.1 >prot_P-wetherbeei_contig8263.1.1 ID=prot_P-wetherbeei_contig8263.1.1|Name=mRNA_P-wetherbeei_contig8263.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=524bp MMLMPTGSVLFFPKQDELLPVLKAVAHNFITERCSGDVAAVGMNAVREVVback to top mRNA from alignment at P-wetherbeei_contig8263:31..2129+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8263.1.1 ID=mRNA_P-wetherbeei_contig8263.1.1|Name=mRNA_P-wetherbeei_contig8263.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2099bp|location=Sequence derived from alignment at P-wetherbeei_contig8263:31..2129+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8263:31..2129+ >mRNA_P-wetherbeei_contig8263.1.1 ID=mRNA_P-wetherbeei_contig8263.1.1|Name=mRNA_P-wetherbeei_contig8263.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1572bp|location=Sequence derived from alignment at P-wetherbeei_contig8263:31..2129+ (Phaeothamnion wetherbeei SAG_119_79)back to top |