mRNA_P-wetherbeei_contig825.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: D7FK14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK14_ECTSI) HSP 1 Score: 201 bits (512), Expect = 9.120e-58 Identity = 97/176 (55.11%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 28 GSGPWAEVSRRDGVTVWKRYFPPSERGHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDVAKLGPDTKIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILKNHVRSEILLGITVLRPAPGSNGRRTDVTT 555
G+ W EV+ R GVTVWK+YFP E G++YPCVKARG ++ +V++M+ DS RV EYN YS GRTD+ LGP TKIVWN+AQPPLS KLHDFCTLMH++PL D + G ++++TRATEHP+AP+L HVRSEILLG+T+LRPA G + RT++TT
Sbjct: 55 GTPGWEEVAHRGGVTVWKKYFPKDEYGYKYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEE---------------------GSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKG-DPTRTEMTT 208
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A835Z8H4_9STRA (START domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H4_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.090e-43 Identity = 84/163 (51.53%), Postives = 103/163 (63.19%), Query Frame = 1
Query: 40 WAEVSRRDGVTVWKRYFPPSERGHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDVAKLGPDTKIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILKNHVRSEILLGITVLRP-APG 525
W EV ++DGVTVWK++ P G QYPCVKA V+ E + ++ DS+RV EYN YS GR DVA+LGP TKIVWNR QPPL+ K+HDFCTLMH+ RD GG + TRAT+H RAP L+ VRSEI+LG+TV+ P APG
Sbjct: 22 WVEVHQKDGVTVWKKWLPKGVYGSQYPCVKATAVVEVNAEAFVDLILDSSRVLEYNRYSRGRDDVARLGPHTKIVWNRTQPPLTGKVHDFCTLMHV-DRRDG----------------------GGATVTTRATDHERAPRLRGAVRSEIVLGVTVVEPLAPG 161
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A4D9DEU8_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEU8_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.910e-41 Identity = 88/212 (41.51%), Postives = 118/212 (55.66%), Query Frame = 1
Query: 1 MENSGH--VGGGSGPWAEVSRRDGVTVWKRYFPPSERGHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDVAKLGPDTKIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILKNHVRSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRVSARNAADF 630
+E GH +G G W VS ++ +W+R G +YPC+K + A PE V+ +L DS RV EYN YS GR DVA++GP TKIVWNR PPL K H+FCT+MH+ +R D G VMLT+ T+HP P RSEI+LG+T +RP P ++ R +TT++HV S G+P IA++ S R DF
Sbjct: 211 LEEEGHQALGDEGGGWHPVSEKEDTKIWRRNLAEDAYGREYPCLKLSTMLHASPEAVMDLLVDSERVGEYNKYSKGRDDVARVGPHTKIVWNRTLPPLQKKAHEFCTIMHV--VRRPD---------------------GSQVMLTKFTDHPEVPRSSRFARSEIILGVTEVRPHP-TDPNRAHLTTISHVKSAGIPPFIAEKFSVRGVVDF 398
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A7S2DLP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLP4_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.250e-33 Identity = 79/186 (42.47%), Postives = 109/186 (58.60%), Query Frame = 1
Query: 88 FPPSER-GHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDVAKLGPDTKIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILKNHVRSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRVSARNAADFIINV 642
+PP + G + VK+R V A P + M+ DS+R KEYN YSVGRTD +LG TKIVWNR PP + + HDFCTLMH G+ T G+ +++T ATEHP+ K ++RSEILLG+ ++ P S G+ T++T + HV + GVP +A+RVSA +A DF+ V
Sbjct: 1 WPPKDTYGSENSFVKSRSLVSASPGDIFDMIYDSSRTKEYNKYSVGRTDAVELGKTTKIVWNRTAPPGTKRPHDFCTLMH-------------------GETFTNGT----QLLMTCATEHPKVKPSKEYLRSEILLGVNLMVPI--SEGQ-TELTCINHVKTKGVPTFLAERVSAGSAIDFVRQV 160
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A7S2EST7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EST7_TRICV) HSP 1 Score: 110 bits (276), Expect = 4.590e-23 Identity = 77/215 (35.81%), Postives = 111/215 (51.63%), Query Frame = 1
Query: 67 VTVWKRYFPPSERGHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDVA--KLGPDT----------KIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILK-----------NHVRSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRVSARNAADFIINV 642
+ VW F G + P VK +D P +L DS+RV+ YN S+GR D+ +LG DT KIV N QPPLS + +F TLMH R L D+DA V +G GG G+V+++RA + P + +++RSEILLG+ ++RP PG + ++ +VT VTH S VP M+A +V + A F+ +V
Sbjct: 133 ILVWTGKFRSDGYGSELPLVKTTWLLDMSPRSFAELLMDSSRVRSYNKMSLGRADLICFQLGIDTIKGEYGNGEAKIVRNLTQPPLSKRRMEFITLMHARRLDDADA---VNSGM------MGGDKENGFVVVSRAIGGNKIPNKEVGNKMDDGHDESYIRSEILLGVNLIRPIPG-HPQKAEVTAVTHCNSPSVPTMLAGKVGVKGAVGFVKDV 337
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A7S2A132_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A132_TRICV) HSP 1 Score: 97.8 bits (242), Expect = 6.100e-20 Identity = 69/186 (37.10%), Postives = 100/186 (53.76%), Query Frame = 1
Query: 154 PEKVLAMLTDSARVKEYNSYSVGRTDVA--KLGPDT----------KIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILK-----------NHVRSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRVSARNAADFIINV 642
P +L DS+RV+ YN S+GR D+ +LG DT KIV N QPPLS + +F TLMH R L D+DA V +G GG G+V+++RA + P + +++RSEILLG+ ++RP PG + ++ +VT VTH S VP M+A +V + A F+ +V
Sbjct: 3 PLSFAELLMDSSRVRSYNKMSLGRADLICFQLGIDTIKGEYGNGEAKIVRNLTQPPLSKRRMEFITLMHARRLDDADA---VNSGM------MGGDKENGFVVVSRAIGGNKIPNKEVGNKMDDGHDESYIRSEILLGVNLIRPIPG-HPQKAEVTAVTHCNSPSVPTMLAGKVGVKGAVGFVKDV 178
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A7S1Y726_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y726_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.170e-19 Identity = 69/181 (38.12%), Postives = 97/181 (53.59%), Query Frame = 1
Query: 106 GHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDVAKL-GPD--TKIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILKN--HVRSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRVSARNAADFI 633
G P VK+ +D PE++ +L DS++VK YN YSVGRTDV ++ GP TKIV N +PP+S K T++H R L ENG Y++++RA N + RSEILLG+ +L P G R VT++THV S +P MIA RV+ ++A +F+
Sbjct: 151 GSNLPVVKSESIIDMTPEQMSDLLLDSSKVKTYNKYSVGRTDVRRIEGPTGTTKIVRNITKPPVSQKKVMVTTMLHSRQL-------------ENGS----------YIVVSRAVPPVADEDTSNEEYGRSEILLGVNLLEPCNGEKSSR--VTSITHVYSQDLPNMIASRVAVKSAVNFV 306
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A7R9WJR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJR5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.940e-19 Identity = 74/218 (33.94%), Postives = 107/218 (49.08%), Query Frame = 1
Query: 67 VTVWKRYFPPSERGHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDVAKL--GPDT----------KIVWNRAQPPLSTKLHDFCTLMHIRPLRDSD-AGVLVGAGAENGKAGTGGSFVGGYVMLTRATE-HPRAPILKNHV------------RSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRVSARNAADFIINV 642
+ VWK F G P +K +D P+ +L DS+RVK YN S+GR+DV G D+ KIV N +PPLS + +F TLM+ R + + D AG+ + GG GYV+++RA + A L + +SEILLG+ V+R PG G+ ++VT VTH S VP +A +V + A DF+ +V
Sbjct: 61 ILVWKGRFRSDGYGSDLPLIKTTWTLDMAPKAFAELLMDSSRVKAYNKMSLGRSDVVTFQEGIDSSSEEFGDGEAKIVRNLTKPPLSKRNMEFVTLMNARQMEEKDDAGIGI----------MGGCTDAGYVVVSRAVGGNGWADFLPSSASAGVTSTGDEFTKSEILLGVNVIRAVPGQPGK-SEVTAVTHCNSPSVPRALAGKVGVKGAVDFVRDV 267
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A1Z5JJV0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJV0_FISSO) HSP 1 Score: 92.8 bits (229), Expect = 2.530e-17 Identity = 71/201 (35.32%), Postives = 101/201 (50.25%), Query Frame = 1
Query: 67 VTVWKRYFPPSERGHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDV----AKLGPD--TKIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHPRAPILKNHVRSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRVSARNAADFIINVGRS 651
+ VW G + P +K+R + PPE+V+ +L DS RVK YN +S GRTD A+ G TKIV + QPPL K TL+H RP SD G +V + + G A + LT RS+ILLG+ +L P + +T++THV S +P M+A+R+ AR+A +F I+V S
Sbjct: 96 IQVWTGKAKKEGHGSEVPFIKSRSILPMPPEEVVELLMDSERVKTYNQWSQGRTDCWIAPAEEGSQKQTKIVKSTTQPPLGAKPVVSVTLLHARPW-GSDGGWIVVSRSPGGNA-----YFDADDSLTS--------------RSDILLGVNLLSPLDEES---CILTSLTHVYSPAIPAMLAERLGARSAINFAIDVRNS 273
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Match: A0A7S4VX38_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VX38_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 5.680e-16 Identity = 62/216 (28.70%), Postives = 101/216 (46.76%), Query Frame = 1
Query: 37 PWAEVSRRDGVTVWKRYFPPSERGHQYPCVKARGEVDAPPEKVLAMLTDSARVKEYNSYSVGRTDV-------------AKLG--PDTKIVWNRAQPPLSTKLHDFCTLMHIRPLRDSDAGVLVGAGAENGKAGTGGSFVGGYVMLTRATEHP-----------RAPILKNHVRSEILLGITVLRPAPGSNGRRTDVTTVTHVVSNGVPVMIADRV 606
PW + + + VW F G P +K RG ++ + ++ ++ DS RVKEYN +++GRTD + LG D K++ + ++PPL K +F +MH R L ENG+ + GYV TR+ ++ I N RSE+LLG+ ++R G ++TT++H+ S GVP+ +A R+
Sbjct: 347 PWYQPRNKKEIFVWSGKFDHGGHGSHLPAIKTRGIINCSAKNLVELIVDSNRVKEYNGFALGRTDEFYFQEGLETDLSDSSLGIAGDAKLIRSLSKPPLIRKPLEFYNIMHARKLSK-----------ENGE------MINGYVCTTRSVWEKEEYAVAFAAGGKSDIPTNTSRSELLLGVNIMRDLDGELEGWCELTTLSHMNSPGVPLSLAKRI 545 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig825.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig825.3.1 >prot_P-wetherbeei_contig825.3.1 ID=prot_P-wetherbeei_contig825.3.1|Name=mRNA_P-wetherbeei_contig825.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp MENSGHVGGGSGPWAEVSRRDGVTVWKRYFPPSERGHQYPCVKARGEVDAback to top mRNA from alignment at P-wetherbeei_contig825:3399..5872- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig825.3.1 ID=mRNA_P-wetherbeei_contig825.3.1|Name=mRNA_P-wetherbeei_contig825.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2474bp|location=Sequence derived from alignment at P-wetherbeei_contig825:3399..5872- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig825:3399..5872- >mRNA_P-wetherbeei_contig825.3.1 ID=mRNA_P-wetherbeei_contig825.3.1|Name=mRNA_P-wetherbeei_contig825.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig825:3399..5872- (Phaeothamnion wetherbeei SAG_119_79)back to top |