prot_P-wetherbeei_contig824.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig824.2.1
Unique Nameprot_P-wetherbeei_contig824.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length309
Homology
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BLAST of mRNA_P-wetherbeei_contig824.2.1 vs. uniprot
Match: A0A6H5JDC5_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDC5_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.500e-24
Identity = 120/363 (33.06%), Postives = 160/363 (44.08%), Query Frame = 0 
Query:    1 VAEALRRKDAGNSQFYQGRMLAKHTAGRNALSDSCMEYAMGLQELAKADAMIKRLRWLEAQSPQDQPQGGREDGEGDHPAKGNDRSDAM-----DAAATQPDGSTVLNAESDAAAEPTLAEVE-----QTADAVRPALYLNLAATNLLLEEWTPALACCQQVLEVCVPELATAVDAGGAVPLEFVVSSGDGSDS--GXXXXXXXXXXXXXXXXXDRRAAGAANSQNDAAGLSSPLLPPLPSLPLDM----------------------PSN-SDLAAHPLA--------------------AVAAKALYRRSQARRGMGDAAAGREDLRRALRIRPADTAIRRELEEAEAAAAREAAQEALKK 308
            +AEA   KD GN  F++G++LAKHTAG+N L D+C+ YA GL+ L +ADA     R L  ++ Q               A   D SD        +    P   +  N    +   PTL + E     + AD VRP+LYLNLAA NLLL+EWTPA+ACC  VL+ C  +    ++A      E   +  +  D   G                 D   AG+A   +      + L P     P D                       PS  +D  A P A                     VAAK LYRR+ A  G GD AA REDL RALR++P D AI REL++A+   A   A+E+L++
Sbjct:   29 LAEAESCKDRGNVDFHKGKVLAKHTAGKNFLRDACVLYAEGLRVLGEADA-----RLLAQRAQQXXXXXXXXXXXXXXXASAADNSDGSRSLTPSSPVPPPREKSQGNDGQASVLPPTLQDRETISLSKRADTVRPSLYLNLAACNLLLQEWTPAIACCTHVLDECCGDALREIEA------EIGGTGKEARDGVPGVAQGDRRTASAAANDSTDTTRAGSATGTSTGDATDAALAPTGTGAPPDKRQQQQKEGQSGEIYGEHQGTTAPSRGADREAEPRADPPQEESGGRDREAEKTRCREVAAKCLYRRAAALAGGGDVAAAREDLVRALRLKPRDAAISRELKKADKQLAENEARESLRR 380
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig824.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDC5_9PHAE2.500e-2433.06CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 288..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..117
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 126..159
e-value: 12.0
score: 14.3
coord: 250..283
e-value: 10.0
score: 15.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..302
e-value: 8.4E-15
score: 56.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 121..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig824contigP-wetherbeei_contig824:675..1601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig824.2.1mRNA_P-wetherbeei_contig824.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig824 675..1601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig824.2.1 ID=prot_P-wetherbeei_contig824.2.1|Name=mRNA_P-wetherbeei_contig824.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp
VAEALRRKDAGNSQFYQGRMLAKHTAGRNALSDSCMEYAMGLQELAKADA
MIKRLRWLEAQSPQDQPQGGREDGEGDHPAKGNDRSDAMDAAATQPDGST
VLNAESDAAAEPTLAEVEQTADAVRPALYLNLAATNLLLEEWTPALACCQ
QVLEVCVPELATAVDAGGAVPLEFVVSSGDGSDSGGGSGDGDSGGCDGGS
DGDRRAAGAANSQNDAAGLSSPLLPPLPSLPLDMPSNSDLAAHPLAAVAA
KALYRRSQARRGMGDAAAGREDLRRALRIRPADTAIRRELEEAEAAAARE
AAQEALKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf