prot_P-wetherbeei_contig8239.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8239.1.1
Unique Nameprot_P-wetherbeei_contig8239.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length128
Homology
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: A0A2P4YHC9_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHC9_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.400e-67
Identity = 99/127 (77.95%), Postives = 110/127 (86.61%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTACTTVKHLALGV+ LGCEDAL HLLNFVWPNIFE SPHV++AVFEA+EG  VALG   +LQYVLQGLFHPARRVRE YWK+YNSLY+   D LT AYPA++DDG N+Y RTYLE+ I
Sbjct:   46 MDRDLVHRQTACTTVKHLALGVAGLGCEDALVHLLNFVWPNIFETSPHVINAVFEAVEGCRVALGPHVILQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPALDDDGVNSYNRTYLELCI 172          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: D7FI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI13_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 2.970e-67
Identity = 103/127 (81.10%), Postives = 114/127 (89.76%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTACTTVKHL+LGV+ LGCEDAL HLLNFVWPNIFE SPHV++AVFEAIEG++VALG  R+LQYVLQGLFHPARRVRE YWKLYNSLYI GAD LT AYP + DDG N YRRT+LE+F+
Sbjct:  433 MDRDLVHRQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 559          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: A0A7S2XY64_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY64_9STRA)

HSP 1 Score: 209 bits (532), Expect = 6.650e-65
Identity = 96/127 (75.59%), Postives = 112/127 (88.19%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTA TTVKH+ALGV+ LGCEDAL HLLNFVWPNIFE SPHV++AV EA+EG  VALG  ++LQYV+QGL+HPARRVR+ YWK+YN+LY+ GAD LT AYP +EDDG NTYRRT+LE+FI
Sbjct:  218 MDRDLVHRQTASTTVKHIALGVAGLGCEDALTHLLNFVWPNIFENSPHVINAVMEAVEGCMVALGPTKILQYVMQGLYHPARRVRDVYWKIYNTLYMFGADALTPAYPRLEDDGLNTYRRTHLELFI 344          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: A0A1Z9QC94_9BACT (TOG domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QC94_9BACT)

HSP 1 Score: 218 bits (555), Expect = 2.460e-63
Identity = 100/127 (78.74%), Postives = 115/127 (90.55%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTACTTVKHLALGV+ LGCEDA++HLLNFVWPNIFE SPHV+ AVFEAIEG+ VALG  ++LQYVLQGL+HPARRVR+ YWKLYN++YI GAD LT AYP +EDDG NTYRRT+LE+F+
Sbjct: 1147 MDRDLVHRQTACTTVKHLALGVAGLGCEDAVSHLLNFVWPNIFETSPHVIAAVFEAIEGMIVALGPIKILQYVLQGLYHPARRVRDVYWKLYNTIYIYGADALTCAYPRLEDDGVNTYRRTHLELFV 1273          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: A0A6V1S7R5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S7R5_HETAK)

HSP 1 Score: 214 bits (544), Expect = 2.130e-62
Identity = 98/127 (77.17%), Postives = 113/127 (88.98%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQT+CTTVKHLALGV+ LGCEDAL HLLN+VWPNIFEVSPH+++A FEAI G  VALG  RVLQYVLQG++HPARRVR+ YWK+YNSLYI GAD LT AYP +ED+G NTYRRT+LE+F+
Sbjct:  769 MDRDLVHRQTSCTTVKHLALGVAGLGCEDALTHLLNYVWPNIFEVSPHMINACFEAIGGCAVALGPTRVLQYVLQGMYHPARRVRDVYWKIYNSLYIYGADALTPAYPRLEDEGANTYRRTHLELFV 895          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: A0A5D6XVH6_9STRA (SF3b1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVH6_9STRA)

HSP 1 Score: 214 bits (544), Expect = 7.530e-62
Identity = 103/127 (81.10%), Postives = 110/127 (86.61%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTACTTVKHLALGV+ LGCEDAL HLLNFVWPNIFE SPHV++AVFEAIEG  VALG   VLQYVLQGLFHPARRVRE YWK+YNSLY+   D LT AYPAIEDDG N YRRTYLE+ +
Sbjct: 1144 MDRDLVHRQTACTTVKHLALGVAGLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGCRVALGPHVVLQYVLQGLFHPARRVREVYWKIYNSLYMYAQDALTPAYPAIEDDGINAYRRTYLELCL 1270          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: A0A835Z3L3_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.630e-61
Identity = 102/127 (80.31%), Postives = 108/127 (85.04%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTACTTVKH+ALGV+ LGCEDAL HLLNFVWPNIFE S HV++AV EAIEG TVALG ARV  YV QGL+HPARRVRE YWKLYN LYI GAD LT AYP I+DD RN YRRT LEVFI
Sbjct: 1202 MDRDLVHRQTACTTVKHIALGVAGLGCEDALVHLLNFVWPNIFETSAHVINAVMEAIEGCTVALGPARVFMYVAQGLYHPARRVREVYWKLYNMLYIYGADALTPAYPVIQDDARNRYRRTDLEVFI 1328          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: M4BK12_HYAAE (INTEIN_C_TER domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=M4BK12_HYAAE)

HSP 1 Score: 211 bits (537), Expect = 6.810e-61
Identity = 100/127 (78.74%), Postives = 109/127 (85.83%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTACTTVKHLALGV+ LGCEDAL HLLNFVWPNIFE SPHV++AVFEA+EG  VALG   +LQYVLQGLFHPARRVRE YWK+YNSLY+   D LT AYP +EDDG NTY RTYLE+ I
Sbjct: 1283 MDRDLVHRQTACTTVKHLALGVTGLGCEDALVHLLNFVWPNIFETSPHVINAVFEAVEGCRVALGPHVILQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPVLEDDGVNTYNRTYLELVI 1409          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: A0A2G9IC96_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9IC96_9LAMI)

HSP 1 Score: 191 bits (484), Expect = 1.670e-60
Identity = 91/128 (71.09%), Postives = 103/128 (80.47%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDD-GRNTYRRTYLEVFI 127
            MDRDLVHRQTA + VKH+ALGV+ LGCEDAL HLLN+VWPNIFE SPHV++AV EAIEG+ VALG A VL Y LQGLFHPAR+VRE YWK+YNSLYI   D L AAYP +EDD G N Y R  L +F+
Sbjct:    1 MDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPVLEDDEGNNVYGRPELHIFV 128          
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Match: G5A4J4_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G5A4J4_PHYSP)

HSP 1 Score: 207 bits (528), Expect = 3.010e-60
Identity = 100/127 (78.74%), Postives = 108/127 (85.04%), Query Frame = 0
Query:    1 MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVMHAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGADMLTAAYPAIEDDGRNTYRRTYLEVFI 127
            MDRDLVHRQTACTTVKHLALGV  LGCEDAL HLLNFVWPNIFE SPHV++AVFEA+EG  VALG   VLQYVLQGLFHPARRVRE YWK+YNSLY+   D LT AYP +EDDG N+Y RTYLE+ I
Sbjct:  739 MDRDLVHRQTACTTVKHLALGVVGLGCEDALLHLLNFVWPNIFETSPHVINAVFEAVEGCRVALGPHVVLQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPMLEDDGVNSYNRTYLELCI 865          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8239.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P4YHC9_9STRA2.400e-6777.95Splicing factor 3B subunit 1 n=1 Tax=Phytophthora ... [more]
D7FI13_ECTSI2.970e-6781.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XY64_9STRA6.650e-6575.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z9QC94_9BACT2.460e-6378.74TOG domain-containing protein n=1 Tax=Phycisphaera... [more]
A0A6V1S7R5_HETAK2.130e-6277.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5D6XVH6_9STRA7.530e-6281.10SF3b1 domain-containing protein n=1 Tax=Pythium br... [more]
A0A835Z3L3_9STRA3.630e-6180.31Splicing factor 3B subunit 1 n=1 Tax=Tribonema min... [more]
M4BK12_HYAAE6.810e-6178.74INTEIN_C_TER domain-containing protein n=3 Tax=Per... [more]
A0A2G9IC96_9LAMI1.670e-6071.09Uncharacterized protein n=1 Tax=Handroanthus impet... [more]
G5A4J4_PHYSP3.010e-6078.74Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038737Splicing factor 3B subunit 1-likePANTHERPTHR12097SPLICING FACTOR 3B, SUBUNIT 1-RELATEDcoord: 1..127
NoneNo IPR availablePANTHERPTHR12097:SF1BNAA06G23400D PROTEINcoord: 1..127
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8239contigP-wetherbeei_contig8239:2019..2689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8239.1.1mRNA_P-wetherbeei_contig8239.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8239 2019..2689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8239.1.1 ID=prot_P-wetherbeei_contig8239.1.1|Name=mRNA_P-wetherbeei_contig8239.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp
MDRDLVHRQTACTTVKHLALGVSALGCEDALAHLLNFVWPNIFEVSPHVM
HAVFEAIEGLTVALGHARVLQYVLQGLFHPARRVRETYWKLYNSLYISGA
DMLTAAYPAIEDDGRNTYRRTYLEVFI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038737SF3b_su1-like
IPR016024ARM-type_fold