mRNA_P-wetherbeei_contig8234.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8234.1.1
Unique NamemRNA_P-wetherbeei_contig8234.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A835ZD94_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD94_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.840e-73
Identity = 145/293 (49.49%), Postives = 175/293 (59.73%), Query Frame = 1
Query:   34 PAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTA------------AKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMAL 876
            PAAA   L P     T   +G  AKID  RT RTGFPEVV+GEGKT  Q++ I++  I   +  +                +  S    P +A+++   KW+ L+  + GL YY  A++ VY                                      A P +  LG VAV+CAGTSD+ +AEE AVLLE+CGAAVER+YD+GVAGIHRLFA + RV     A+C+AGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVA LL MLNACAP +AVV IDNGFG AAMA+
Sbjct:    3 PAAAVEQLEPLL---TIAHIGDFAKIDHHRTIRTGFPEVVYGEGKTPEQIRHIMEVMIRHRKSHSXXXXXXXXXXXXXXXXSSGSVDHAPAVASRICSAKWSHLQH-IDGLQYYRDARLAVY-----------------------------------HGSAPPAAGSLGTVAVMCAGTSDVAIAEETAVLLELCGAAVERVYDVGVAGIHRLFAALPRVRAAHCAVCIAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAPLLTMLNACAPGVAVVNIDNGFGAAAMAV 256          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: D8LNM3_ECTSI (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM3_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 6.170e-70
Identity = 158/314 (50.32%), Postives = 184/314 (58.60%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRD--TFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGR---RAAADTAA----------------KSSGHRPPILATKVSEEKWTSLRTAVPG-LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMAL 876
            +L  VAAG L PA A   L P         E VGG AKID  R  R GFPEVVFG+GK++ Q+  IL A I E R   R AA+ AA                       P++AT+VS EKW  +  A+PG L Y+  A+IV      +F      R AA         D A   S+ TS         +G VAVL AGTSDL VAEEAAVL E+ GA V R +D+GVAGIHRL   +  V +  VAICVAGMDGAMP VVAGLV+CPVVAVPTSVGYGAA  G+A LL MLNACAP ++VV IDNGFG AA A+
Sbjct:   23 LLARVAAGDLSPATAASQLAPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSAEQITDILAAMIREARAGSRVAAEAAAVHXXXXXXXXXXXXXXXXXXXXSPVVATRVSPEKWLVISDALPGQLTYHADARIV------SFGEPPQRRRAAG--------DGAPGGSIATSIS-------IGTVAVLSAGTSDLAVAEEAAVLAELAGAEVSRFHDVGVAGIHRLLGAIPSVQKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAV 315          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A352AAW6_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AAW6_9CYAN)

HSP 1 Score: 219 bits (558), Expect = 4.820e-67
Identity = 134/292 (45.89%), Postives = 173/292 (59.25%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPL-GRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            +L+ VAAG + P  A   L    +   FESVG  AKID  RT RTGFPEV++G GKT  Q+  I++A  +                 P ++AT++  E +T L+  VPGL YYPTAQI   A  A                                     ++P   G +A++CAGTSDLPVAEEAAV  E+CG  V+R++D+GVAGIHRL ++ + +    VAI VAGM+GA+PSVVAGL  CPV+AVPTS+GYGA+FGG+A LL MLN+CAP + VV IDNGFG A +A
Sbjct:   10 LLEAVAAGHVSPDVALEKL----KNFAFESVGDFAKIDHHRTLRTGFPEVIWGLGKTPDQIAQIMEAMRLR---------------NPLVMATRIVPEVFTQLQDKVPGLKYYPTAQICAVAPDA-------------------------------------IAPKYAGTIALICAGTSDLPVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLSHREMIAEADVAIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGVGVVNIDNGFGAAILA 245          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: K9WGE5_9CYAN (NCAIR mutase-like protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=K9WGE5_9CYAN)

HSP 1 Score: 212 bits (540), Expect = 1.520e-64
Identity = 131/291 (45.02%), Postives = 170/291 (58.42%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            +L+ VAAG++ PA A   L    +  T+ESVG  AK+D  RT RTGFPEV++G GKT  Q+  I++A  +               H P ++AT++  + +  L+  VP + YY TA+I   A                                     AAP     G ++++ AGTSDLPVAEEAAV  E+CG  V+R++D+GVAGIHRL  N D + +  V I VAGM+GA+PSVVAGL  CPVVAVPTSVGYGA+FGG+A LL MLN+CA  I VV IDNGFG A +A
Sbjct:   10 LLESVAAGQVSPANALDKL----KNFTYESVGDFAKVDHHRTLRTGFPEVIWGPGKTPDQIAQIMEAMRL---------------HNPVVMATRIEPDVFAQLQEKVPDVQYYSTARICALAP------------------------------------AAPQPTYAGLISLISAGTSDLPVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLNNRDAIAQADVLIVVAGMEGALPSVVAGLADCPVVAVPTSVGYGASFGGLAPLLTMLNSCAAGIGVVNIDNGFGAAILA 245          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A6P0QDS6_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QDS6_9CYAN)

HSP 1 Score: 207 bits (528), Expect = 9.750e-63
Identity = 130/291 (44.67%), Postives = 167/291 (57.39%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            +L+ VAAG + PA+A   L    +   FESVG  AKID  RT RTGFPEV++G GKT  Q+  I++   V                 P ++AT++  + +  L+  V GL YYPTA+I          T + + S                                G + V+CAGTSDLPVAEEAAV  E+CG  V+R++D+GVAGIHRL +N   +    V I VAGM+GA+PSVVAGL  CPV+AVPTS+GYG +FGG+A LL MLN+CAP I VV IDNGFG A +A
Sbjct:   10 LLEAVAAGNVTPASALDKL----KNLAFESVGDFAKIDHHRTLRTGFPEVIWGLGKTPEQIAQIMEVMRVR---------------NPLVMATRIEPDVFAKLQEKVSGLQYYPTARICSLVP----GTIQSKYS--------------------------------GIINVICAGTSDLPVAEEAAVTAELCGFQVKRLWDVGVAGIHRLLSNQQVITEADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGTSFGGIAPLLTMLNSCAPGIGVVNIDNGFGAAILA 245          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: K3WGX4_GLOUD (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGX4_GLOUD)

HSP 1 Score: 208 bits (530), Expect = 1.140e-62
Identity = 135/294 (45.92%), Postives = 170/294 (57.82%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPG---LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            +L  VAAG++ PA+A      + +R  +E VGG AKIDT+R  RTGFPEVV+ EGKT  Q+  I++  + +G     DT          ++AT+V+      +   V      VYYPTA+I+                              AS  +N S      +   G   +LCAGTSDLPVAEEAA+ LE+ G  V+R+YD+GVAGIHRL  N   +H   VAICVAGMDGA+P VV GL   PVVAVPTSVGYGAAF G+A LL MLNAC+P + VV IDNGFG A +A
Sbjct:   41 LLQQVAAGEVSPASAVE----QCRRLEYEDVGGYAKIDTNRFKRTGFPEVVYAEGKTPEQVAQIMELMVAKG----VDT---------NVMATRVTPLSVEEILVKVAPDHKYVYYPTARIL------------------------------ASKDLNGSQGEGKKALRKGIACILCAGTSDLPVAEEAAITLELAGYEVKRLYDVGVAGIHRLLRNQHVLHESDVAICVAGMDGALPGVVGGLTEIPVVAVPTSVGYGAAFSGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 287          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: W2QAR8_PHYPN (Phosphoribosylaminoimidazole carboxylase n=8 Tax=Phytophthora TaxID=4783 RepID=W2QAR8_PHYPN)

HSP 1 Score: 208 bits (529), Expect = 2.580e-62
Identity = 132/293 (45.05%), Postives = 163/293 (55.63%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPG--LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            +L  VA GK+ P  A  L  P  +   +E+VG  AKIDT R +RTGFPEVV+ E KTS Q+ AI+KA I               G    ++A++V+ +    +R  +PG  L YY   +I+   T  +    + E     A                                VLCAGTSDLPVAEEAAV LE+    V R+YD+GVAGIHRL  N   +    VAICVAGMDGA+P VV GL   PV+AVPTSVGYGAAFGG+A LL MLNAC+P + VV IDNGFG A +A
Sbjct:   53 LLQRVADGKVSPQEAAELCGPAAE---YEAVGDFAKIDTKREARTGFPEVVYAESKTSQQVAAIMKAMI--------------DGGEDNVMASRVTPQAADQIRALMPGQHLTYYEMPRILASKTLESATKGDVEMDCPTA-------------------------------CVLCAGTSDLPVAEEAAVTLELADYRVTRLYDVGVAGIHRLLRNQHILRASDVAICVAGMDGALPGVVGGLTSAPVIAVPTSVGYGAAFGGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 297          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A6P0MMH7_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Symploca sp. SIO2C1 TaxID=2607783 RepID=A0A6P0MMH7_9CYAN)

HSP 1 Score: 206 bits (524), Expect = 4.150e-62
Identity = 128/294 (43.54%), Postives = 171/294 (58.16%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRP---PILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            +L  VAAGK+ PA A   L+       +ESVG  AKID +RT RTGFPEV++G GKT  Q+  I++               + +G  P   PI+ T++  + +  L+  VP + YYPTA+I                             IA   S    S         G ++++CAGTSDLPVAEEA +  E+CG  V+R++D+GVAGI RL +N+  ++   V I +AGM+GA+PSVVAGL  CPV+AVPTS+GYGA+FGG+A LL MLN+CAP I VV IDNGFG A +A
Sbjct:   10 LLKAVAAGKVSPADALDKLN----NFAYESVGDFAKIDHNRTLRTGFPEVIWGLGKTLEQITQIMEVMR------------ERNGTEPNPVPIMVTRIEPDIYAQLKAQVPDIQYYPTARICA---------------------------IAPKRSKPQYS---------GTISLICAGTSDLPVAEEAGITAELCGFQVQRLWDVGVAGIQRLLSNLQVINEADVLIVIAGMEGALPSVVAGLANCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGIGVVNIDNGFGAAILA 251          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A3R7JW94_9STRA (Phosphoribosylaminoimidazole carboxylase (Fragment) n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JW94_9STRA)

HSP 1 Score: 207 bits (527), Expect = 6.500e-62
Identity = 134/295 (45.42%), Postives = 171/295 (57.97%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPG--LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNT--SSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            +L+ VAAGK+ P  A  +   + +   +E+VG  AKIDT R  RTGFPEVV+ E KTS Q+  I+K  I               G    ++A++V++E    +RT +PG  L YY   +I+                         A+  AA++  N   + + AP +       VLCAGTSDLPVAEEAAV LE+    V R+YD+GVAGIHRL  N   +H   VAICVAGMDGA+P VV GL   PV+AVPTSVGYGAAF G+A LL MLNAC+P + VV IDNGFG A +A
Sbjct:   53 LLERVAAGKVSPIEAAEIYSSKFE---YEAVGDYAKIDTKRGVRTGFPEVVYAESKTSEQVATIMKVMI--------------DGGEDNVMASRVTKEAADEIRTLMPGQQLTYYEVPRILA----------------------SKALGDAAASKTNEFKTEKKAPTA------CVLCAGTSDLPVAEEAAVTLELADYQVTRLYDVGVAGIHRLLRNQHVLHASDVAICVAGMDGALPGVVGGLTDVPVIAVPTSVGYGAAFSGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 302          
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A2D4BLY6_PYTIN (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLY6_PYTIN)

HSP 1 Score: 207 bits (526), Expect = 1.220e-61
Identity = 137/291 (47.08%), Postives = 169/291 (58.08%), Query Frame = 1
Query:    1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
            VL+ VA+G++ P  A        QR  +E++G  AKIDT R +RTGFPEVV+ EGKT  Q+ +I+KA + +G     D           ++AT+VS E    ++   P   Y+ TA+I+                          +D AA A V T           G V VL AGTSDLPVAEEAAV LE+    V R+YD+GVAGIHRL  N   +H   VAICVAGMDGAMP VV GL   PV+AVPTSVGYGAAFGG+A LL MLNAC+P + VV IDNGFG A +A
Sbjct:   30 VLERVASGEIAPKDAVAAC----QRLEYEALGEYAKIDTKRLARTGFPEVVYAEGKTPEQVASIMKAMVEKG----VDN----------VMATRVSREHADFVQRLAPYR-YHETARILA----------------------SRXIDKAAHAXVGT-----------GSVCVLAAGTSDLPVAEEAAVTLELARIRVTRLYDVGVAGIHRLLQNQHVLHESDVAICVAGMDGAMPGVVGGLTDIPVIAVPTSVGYGAAFGGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZD94_9STRA1.840e-7349.49Phosphoribosylaminoimidazole carboxylase n=1 Tax=T... [more]
D8LNM3_ECTSI6.170e-7050.32Phosphoribosylaminoimidazole carboxylase n=2 Tax=E... [more]
A0A352AAW6_9CYAN4.820e-6745.89Nickel pincer cofactor biosynthesis protein LarB n... [more]
K9WGE5_9CYAN1.520e-6445.02NCAIR mutase-like protein n=2 Tax=Oscillatoriales ... [more]
A0A6P0QDS6_9CYAN9.750e-6344.67Nickel pincer cofactor biosynthesis protein LarB n... [more]
K3WGX4_GLOUD1.140e-6245.92Phosphoribosylaminoimidazole carboxylase n=1 Tax=G... [more]
W2QAR8_PHYPN2.580e-6245.05Phosphoribosylaminoimidazole carboxylase n=8 Tax=P... [more]
A0A6P0MMH7_9CYAN4.150e-6243.54Nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A3R7JW94_9STRA6.500e-6245.42Phosphoribosylaminoimidazole carboxylase (Fragment... [more]
A0A2D4BLY6_PYTIN1.220e-6147.08Phosphoribosylaminoimidazole carboxylase n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8234contigP-wetherbeei_contig8234:2..1457 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LNM3
PFAMsAIRC
Model size876
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.01e-70
EggNOG OGsCOG1691@1|root,2S0IG@2759|Eukaryota
DescriptionAIR carboxylase
Cds size876
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187028.2530322-CDS-P-wetherbeei_contig8234:1..1831683187028.2530322-CDS-P-wetherbeei_contig8234:1..183Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8234 2..183 -
1683187028.2702425-CDS-P-wetherbeei_contig8234:481..6491683187028.2702425-CDS-P-wetherbeei_contig8234:481..649Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8234 482..649 -
1683187028.2800317-CDS-P-wetherbeei_contig8234:777..11561683187028.2800317-CDS-P-wetherbeei_contig8234:777..1156Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8234 778..1156 -
1683187028.288359-CDS-P-wetherbeei_contig8234:1310..14571683187028.288359-CDS-P-wetherbeei_contig8234:1310..1457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8234 1311..1457 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8234.1.1prot_P-wetherbeei_contig8234.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8234 2..1457 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8234.1.1

>prot_P-wetherbeei_contig8234.1.1 ID=prot_P-wetherbeei_contig8234.1.1|Name=mRNA_P-wetherbeei_contig8234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp
VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEV
VFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKW
TSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAA
SASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERI
YDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVP
TSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMAL
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mRNA from alignment at P-wetherbeei_contig8234:2..1457-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8234.1.1 ID=mRNA_P-wetherbeei_contig8234.1.1|Name=mRNA_P-wetherbeei_contig8234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1456bp|location=Sequence derived from alignment at P-wetherbeei_contig8234:2..1457- (Phaeothamnion wetherbeei SAG_119_79)
GTGCTCGACGATGTTGCCGCAGGCAAGTTGCAGCCAGCGGCGGCGGAGCG ATTGTTGCATCCTCGGCAGCAGAGAGACACTTTCGAAAGCGTCGGCGGCC TGGCCAAGATCGACACATCGAGGACGTCTCGAACAGGGTTTCCAGAGGTG AGAGAGACGCCTTGCAGAGTTCAACTTAATCTACAATCGCAAGTGTTTGC AACACCCACTCGTAGGTGAACCCCGAGAATGTTCTTAATAGTCTCGTCAG TAAAAAGGAGGAAGAAACATTTGCCGTCCCGGTGCTCGCCACCAATATCA GGTCGTGTTTGGCGAGGGCAAAACCTCTGGTCAATTACAGGCAATTCTCA AAGCATTTATAGTAGAAGGGCGACGCGCAGCTGCCGACACTGCGGCGAAG TCCAGCGGCCATCGCCCGCCAATACTCGCGACAAAAGTGTCGGAGGAGAA GTGGACCAGCCTGCGAACTGCGGTGCCCGGCCTCGTCTACTATCCTACTG CCCAAATCGTGGTGTACGCGACATATGCTACTTTTGCAACGGCGGAGCAC GAACGAAGTGCTGCCGCTGCTGAAAGCGGAGAGAACGCAGTCGACATAGC GGCTAGCGCATCCGTCAACACCTCTTCTGAGGCAGCGCCGCTGTCGCCAC CTCTCGGCCGTGTCGCTGTGCTGTGTGCCGGTAAGGATTTTGATAGAAAA GTTGGCTTTGGTTTGTCTGCTTATCCCTGCCTCATCATGCACTCAGCGCC CACGCTTGCCAGCTTCACCTTCTTGCATCTTCCTGCCTCTGAATTCTCCC CCTTCCAGGCACGTCGGACCTTCCCGTCGCAGAGGAGGCGGCGGTGCTGC TCGAGGTGTGCGGCGCCGCCGTGGAGCGGATCTACGACATCGGCGTGGCG GGCATCCACCGCCTCTTCGCCAACATGGATCGCGTGCACCGCTGCCAGGT CGCCATCTGCGTCGCTGGTATGGACGGTGAGCGAATGTTGCCGCCTGGAA GCAATGCACCAAGGGGCTGGTTTCCTGGTTGTTGCTGTTACGCTGCCCTT GCGTTTGTATGGTTGCACCGCCGGCGCTGGTATTGCTGCTCTGCCGCGCC CTTGCGTTTTTTGACGTCGCACTGTCCCCCGTTTCCAACCTTGCGTGCAT ATTTTGCGTCCTGTGAGAGCAATTGGAACATGTGTCGGCTCGCCATCCCA AGCCGACCCATTTTCTCCTTGCCCTTGCCGGCCGTTCCTTCGCACCGTCC GTGTGTCGATTCGCATTCACATAGGAGCCATGCCGAGCGTGGTCGCGGGG CTAGTGCGGTGCCCCGTCGTCGCCGTGCCGACGTCGGTGGGCTACGGGGC AGCCTTCGGCGGCGTGGCGGCGCTGCTGGCGATGCTTAATGCTTGCGCGC CGTGCATAGCCGTCGTCTACATCGACAATGGCTTTGGGGGAGCGGCAATG GCGCTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8234:2..1457-

>mRNA_P-wetherbeei_contig8234.1.1 ID=mRNA_P-wetherbeei_contig8234.1.1|Name=mRNA_P-wetherbeei_contig8234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig8234:2..1457- (Phaeothamnion wetherbeei SAG_119_79)
GTGCTCGACGATGTTGCCGCAGGCAAGTTGCAGCCAGCGGCGGCGGAGCG
ATTGTTGCATCCTCGGCAGCAGAGAGACACTTTCGAAAGCGTCGGCGGCC
TGGCCAAGATCGACACATCGAGGACGTCTCGAACAGGGTTTCCAGAGGTC
GTGTTTGGCGAGGGCAAAACCTCTGGTCAATTACAGGCAATTCTCAAAGC
ATTTATAGTAGAAGGGCGACGCGCAGCTGCCGACACTGCGGCGAAGTCCA
GCGGCCATCGCCCGCCAATACTCGCGACAAAAGTGTCGGAGGAGAAGTGG
ACCAGCCTGCGAACTGCGGTGCCCGGCCTCGTCTACTATCCTACTGCCCA
AATCGTGGTGTACGCGACATATGCTACTTTTGCAACGGCGGAGCACGAAC
GAAGTGCTGCCGCTGCTGAAAGCGGAGAGAACGCAGTCGACATAGCGGCT
AGCGCATCCGTCAACACCTCTTCTGAGGCAGCGCCGCTGTCGCCACCTCT
CGGCCGTGTCGCTGTGCTGTGTGCCGGCACGTCGGACCTTCCCGTCGCAG
AGGAGGCGGCGGTGCTGCTCGAGGTGTGCGGCGCCGCCGTGGAGCGGATC
TACGACATCGGCGTGGCGGGCATCCACCGCCTCTTCGCCAACATGGATCG
CGTGCACCGCTGCCAGGTCGCCATCTGCGTCGCTGGTATGGACGGAGCCA
TGCCGAGCGTGGTCGCGGGGCTAGTGCGGTGCCCCGTCGTCGCCGTGCCG
ACGTCGGTGGGCTACGGGGCAGCCTTCGGCGGCGTGGCGGCGCTGCTGGC
GATGCTTAATGCTTGCGCGCCGTGCATAGCCGTCGTCTACATCGACAATG
GCTTTGGGGGAGCGGCAATGGCGCTT
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