mRNA_P-wetherbeei_contig8234.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A835ZD94_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD94_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.840e-73 Identity = 145/293 (49.49%), Postives = 175/293 (59.73%), Query Frame = 1
Query: 34 PAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTA------------AKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMAL 876
PAAA L P T +G AKID RT RTGFPEVV+GEGKT Q++ I++ I + + + S P +A+++ KW+ L+ + GL YY A++ VY A P + LG VAV+CAGTSD+ +AEE AVLLE+CGAAVER+YD+GVAGIHRLFA + RV A+C+AGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVA LL MLNACAP +AVV IDNGFG AAMA+
Sbjct: 3 PAAAVEQLEPLL---TIAHIGDFAKIDHHRTIRTGFPEVVYGEGKTPEQIRHIMEVMIRHRKSHSXXXXXXXXXXXXXXXXSSGSVDHAPAVASRICSAKWSHLQH-IDGLQYYRDARLAVY-----------------------------------HGSAPPAAGSLGTVAVMCAGTSDVAIAEETAVLLELCGAAVERVYDVGVAGIHRLFAALPRVRAAHCAVCIAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAPLLTMLNACAPGVAVVNIDNGFGAAAMAV 256
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: D8LNM3_ECTSI (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM3_ECTSI) HSP 1 Score: 228 bits (582), Expect = 6.170e-70 Identity = 158/314 (50.32%), Postives = 184/314 (58.60%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRD--TFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGR---RAAADTAA----------------KSSGHRPPILATKVSEEKWTSLRTAVPG-LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMAL 876
+L VAAG L PA A L P E VGG AKID R R GFPEVVFG+GK++ Q+ IL A I E R R AA+ AA P++AT+VS EKW + A+PG L Y+ A+IV +F R AA D A S+ TS +G VAVL AGTSDL VAEEAAVL E+ GA V R +D+GVAGIHRL + V + VAICVAGMDGAMP VVAGLV+CPVVAVPTSVGYGAA G+A LL MLNACAP ++VV IDNGFG AA A+
Sbjct: 23 LLARVAAGDLSPATAASQLAPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSAEQITDILAAMIREARAGSRVAAEAAAVHXXXXXXXXXXXXXXXXXXXXSPVVATRVSPEKWLVISDALPGQLTYHADARIV------SFGEPPQRRRAAG--------DGAPGGSIATSIS-------IGTVAVLSAGTSDLAVAEEAAVLAELAGAEVSRFHDVGVAGIHRLLGAIPSVQKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAV 315
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A352AAW6_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AAW6_9CYAN) HSP 1 Score: 219 bits (558), Expect = 4.820e-67 Identity = 134/292 (45.89%), Postives = 173/292 (59.25%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPL-GRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
+L+ VAAG + P A L + FESVG AKID RT RTGFPEV++G GKT Q+ I++A + P ++AT++ E +T L+ VPGL YYPTAQI A A ++P G +A++CAGTSDLPVAEEAAV E+CG V+R++D+GVAGIHRL ++ + + VAI VAGM+GA+PSVVAGL CPV+AVPTS+GYGA+FGG+A LL MLN+CAP + VV IDNGFG A +A
Sbjct: 10 LLEAVAAGHVSPDVALEKL----KNFAFESVGDFAKIDHHRTLRTGFPEVIWGLGKTPDQIAQIMEAMRLR---------------NPLVMATRIVPEVFTQLQDKVPGLKYYPTAQICAVAPDA-------------------------------------IAPKYAGTIALICAGTSDLPVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLSHREMIAEADVAIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGVGVVNIDNGFGAAILA 245
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: K9WGE5_9CYAN (NCAIR mutase-like protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=K9WGE5_9CYAN) HSP 1 Score: 212 bits (540), Expect = 1.520e-64 Identity = 131/291 (45.02%), Postives = 170/291 (58.42%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
+L+ VAAG++ PA A L + T+ESVG AK+D RT RTGFPEV++G GKT Q+ I++A + H P ++AT++ + + L+ VP + YY TA+I A AAP G ++++ AGTSDLPVAEEAAV E+CG V+R++D+GVAGIHRL N D + + V I VAGM+GA+PSVVAGL CPVVAVPTSVGYGA+FGG+A LL MLN+CA I VV IDNGFG A +A
Sbjct: 10 LLESVAAGQVSPANALDKL----KNFTYESVGDFAKVDHHRTLRTGFPEVIWGPGKTPDQIAQIMEAMRL---------------HNPVVMATRIEPDVFAQLQEKVPDVQYYSTARICALAP------------------------------------AAPQPTYAGLISLISAGTSDLPVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLNNRDAIAQADVLIVVAGMEGALPSVVAGLADCPVVAVPTSVGYGASFGGLAPLLTMLNSCAAGIGVVNIDNGFGAAILA 245
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A6P0QDS6_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QDS6_9CYAN) HSP 1 Score: 207 bits (528), Expect = 9.750e-63 Identity = 130/291 (44.67%), Postives = 167/291 (57.39%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
+L+ VAAG + PA+A L + FESVG AKID RT RTGFPEV++G GKT Q+ I++ V P ++AT++ + + L+ V GL YYPTA+I T + + S G + V+CAGTSDLPVAEEAAV E+CG V+R++D+GVAGIHRL +N + V I VAGM+GA+PSVVAGL CPV+AVPTS+GYG +FGG+A LL MLN+CAP I VV IDNGFG A +A
Sbjct: 10 LLEAVAAGNVTPASALDKL----KNLAFESVGDFAKIDHHRTLRTGFPEVIWGLGKTPEQIAQIMEVMRVR---------------NPLVMATRIEPDVFAKLQEKVSGLQYYPTARICSLVP----GTIQSKYS--------------------------------GIINVICAGTSDLPVAEEAAVTAELCGFQVKRLWDVGVAGIHRLLSNQQVITEADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGTSFGGIAPLLTMLNSCAPGIGVVNIDNGFGAAILA 245
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: K3WGX4_GLOUD (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGX4_GLOUD) HSP 1 Score: 208 bits (530), Expect = 1.140e-62 Identity = 135/294 (45.92%), Postives = 170/294 (57.82%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPG---LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
+L VAAG++ PA+A + +R +E VGG AKIDT+R RTGFPEVV+ EGKT Q+ I++ + +G DT ++AT+V+ + V VYYPTA+I+ AS +N S + G +LCAGTSDLPVAEEAA+ LE+ G V+R+YD+GVAGIHRL N +H VAICVAGMDGA+P VV GL PVVAVPTSVGYGAAF G+A LL MLNAC+P + VV IDNGFG A +A
Sbjct: 41 LLQQVAAGEVSPASAVE----QCRRLEYEDVGGYAKIDTNRFKRTGFPEVVYAEGKTPEQVAQIMELMVAKG----VDT---------NVMATRVTPLSVEEILVKVAPDHKYVYYPTARIL------------------------------ASKDLNGSQGEGKKALRKGIACILCAGTSDLPVAEEAAITLELAGYEVKRLYDVGVAGIHRLLRNQHVLHESDVAICVAGMDGALPGVVGGLTEIPVVAVPTSVGYGAAFSGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 287
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: W2QAR8_PHYPN (Phosphoribosylaminoimidazole carboxylase n=8 Tax=Phytophthora TaxID=4783 RepID=W2QAR8_PHYPN) HSP 1 Score: 208 bits (529), Expect = 2.580e-62 Identity = 132/293 (45.05%), Postives = 163/293 (55.63%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPG--LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
+L VA GK+ P A L P + +E+VG AKIDT R +RTGFPEVV+ E KTS Q+ AI+KA I G ++A++V+ + +R +PG L YY +I+ T + + E A VLCAGTSDLPVAEEAAV LE+ V R+YD+GVAGIHRL N + VAICVAGMDGA+P VV GL PV+AVPTSVGYGAAFGG+A LL MLNAC+P + VV IDNGFG A +A
Sbjct: 53 LLQRVADGKVSPQEAAELCGPAAE---YEAVGDFAKIDTKREARTGFPEVVYAESKTSQQVAAIMKAMI--------------DGGEDNVMASRVTPQAADQIRALMPGQHLTYYEMPRILASKTLESATKGDVEMDCPTA-------------------------------CVLCAGTSDLPVAEEAAVTLELADYRVTRLYDVGVAGIHRLLRNQHILRASDVAICVAGMDGALPGVVGGLTSAPVIAVPTSVGYGAAFGGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 297
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A6P0MMH7_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Symploca sp. SIO2C1 TaxID=2607783 RepID=A0A6P0MMH7_9CYAN) HSP 1 Score: 206 bits (524), Expect = 4.150e-62 Identity = 128/294 (43.54%), Postives = 171/294 (58.16%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRP---PILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
+L VAAGK+ PA A L+ +ESVG AKID +RT RTGFPEV++G GKT Q+ I++ + +G P PI+ T++ + + L+ VP + YYPTA+I IA S S G ++++CAGTSDLPVAEEA + E+CG V+R++D+GVAGI RL +N+ ++ V I +AGM+GA+PSVVAGL CPV+AVPTS+GYGA+FGG+A LL MLN+CAP I VV IDNGFG A +A
Sbjct: 10 LLKAVAAGKVSPADALDKLN----NFAYESVGDFAKIDHNRTLRTGFPEVIWGLGKTLEQITQIMEVMR------------ERNGTEPNPVPIMVTRIEPDIYAQLKAQVPDIQYYPTARICA---------------------------IAPKRSKPQYS---------GTISLICAGTSDLPVAEEAGITAELCGFQVQRLWDVGVAGIQRLLSNLQVINEADVLIVIAGMEGALPSVVAGLANCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGIGVVNIDNGFGAAILA 251
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A3R7JW94_9STRA (Phosphoribosylaminoimidazole carboxylase (Fragment) n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JW94_9STRA) HSP 1 Score: 207 bits (527), Expect = 6.500e-62 Identity = 134/295 (45.42%), Postives = 171/295 (57.97%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPG--LVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNT--SSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
+L+ VAAGK+ P A + + + +E+VG AKIDT R RTGFPEVV+ E KTS Q+ I+K I G ++A++V++E +RT +PG L YY +I+ A+ AA++ N + + AP + VLCAGTSDLPVAEEAAV LE+ V R+YD+GVAGIHRL N +H VAICVAGMDGA+P VV GL PV+AVPTSVGYGAAF G+A LL MLNAC+P + VV IDNGFG A +A
Sbjct: 53 LLERVAAGKVSPIEAAEIYSSKFE---YEAVGDYAKIDTKRGVRTGFPEVVYAESKTSEQVATIMKVMI--------------DGGEDNVMASRVTKEAADEIRTLMPGQQLTYYEVPRILA----------------------SKALGDAAASKTNEFKTEKKAPTA------CVLCAGTSDLPVAEEAAVTLELADYQVTRLYDVGVAGIHRLLRNQHVLHASDVAICVAGMDGALPGVVGGLTDVPVIAVPTSVGYGAAFSGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 302
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Match: A0A2D4BLY6_PYTIN (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLY6_PYTIN) HSP 1 Score: 207 bits (526), Expect = 1.220e-61 Identity = 137/291 (47.08%), Postives = 169/291 (58.08%), Query Frame = 1
Query: 1 VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVVFGEGKTSGQLQAILKAFIVEGRRAAADTAAKSSGHRPPILATKVSEEKWTSLRTAVPGLVYYPTAQIVVYATYATFATAEHERSAAAAESGENAVDIAASASVNTSSEAAPLSPPLGRVAVLCAGTSDLPVAEEAAVLLEVCGAAVERIYDIGVAGIHRLFANMDRVHRCQVAICVAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAALLAMLNACAPCIAVVYIDNGFGGAAMA 873
VL+ VA+G++ P A QR +E++G AKIDT R +RTGFPEVV+ EGKT Q+ +I+KA + +G D ++AT+VS E ++ P Y+ TA+I+ +D AA A V T G V VL AGTSDLPVAEEAAV LE+ V R+YD+GVAGIHRL N +H VAICVAGMDGAMP VV GL PV+AVPTSVGYGAAFGG+A LL MLNAC+P + VV IDNGFG A +A
Sbjct: 30 VLERVASGEIAPKDAVAAC----QRLEYEALGEYAKIDTKRLARTGFPEVVYAEGKTPEQVASIMKAMVEKG----VDN----------VMATRVSREHADFVQRLAPYR-YHETARILA----------------------SRXIDKAAHAXVGT-----------GSVCVLAAGTSDLPVAEEAAVTLELARIRVTRLYDVGVAGIHRLLQNQHVLHESDVAICVAGMDGAMPGVVGGLTDIPVIAVPTSVGYGAAFGGLAPLLTMLNACSPGVGVVNIDNGFGAAVLA 268 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8234.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8234.1.1 >prot_P-wetherbeei_contig8234.1.1 ID=prot_P-wetherbeei_contig8234.1.1|Name=mRNA_P-wetherbeei_contig8234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp VLDDVAAGKLQPAAAERLLHPRQQRDTFESVGGLAKIDTSRTSRTGFPEVback to top mRNA from alignment at P-wetherbeei_contig8234:2..1457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8234.1.1 ID=mRNA_P-wetherbeei_contig8234.1.1|Name=mRNA_P-wetherbeei_contig8234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1456bp|location=Sequence derived from alignment at P-wetherbeei_contig8234:2..1457- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8234:2..1457- >mRNA_P-wetherbeei_contig8234.1.1 ID=mRNA_P-wetherbeei_contig8234.1.1|Name=mRNA_P-wetherbeei_contig8234.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig8234:2..1457- (Phaeothamnion wetherbeei SAG_119_79)back to top |