prot_P-wetherbeei_contig8217.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8217.1.1
Unique Nameprot_P-wetherbeei_contig8217.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length80
Homology
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BLAST of mRNA_P-wetherbeei_contig8217.1.1 vs. uniprot
Match: A0A2P4YAW0_9STRA (Lipid binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAW0_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 4.150e-5
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:    2 MKRLGDLKKEKEDLALEVEREEELLTNTLQKKLN 35
            ++RL D+K EKE LALEVEREEELLTN LQKKLN
Sbjct:   70 LERLHDVKSEKEKLALEVEREEELLTNNLQKKLN 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8217.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2P4YAW0_9STRA4.150e-579.41Lipid binding protein (Fragment) n=1 Tax=Phytophth... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..32
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 1..42
e-value: 1.2E-8
score: 34.4
coord: 48..77
e-value: 3.7E-7
score: 29.6
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 1..39
coord: 49..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8217contigP-wetherbeei_contig8217:36..385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8217.1.1mRNA_P-wetherbeei_contig8217.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8217 33..385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8217.1.1 ID=prot_P-wetherbeei_contig8217.1.1|Name=mRNA_P-wetherbeei_contig8217.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp
MMKRLGDLKKEKEDLALEVEREEELLTNTLQKKLNQAREPAAHSETCFQR
EKVDLENQLEREQEFIVNKLRKQLDQVRFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046