mRNA_P-wetherbeei_contig8212.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A521XGT3_9PROT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XGT3_9PROT) HSP 1 Score: 321 bits (822), Expect = 2.920e-107 Identity = 176/251 (70.12%), Postives = 205/251 (81.67%), Query Frame = 1
Query: 7 DDLDFSA-PAPKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
D+LDFSA PAP+P EAVAR Q AQS Y PA+ALEFFR+ GT+E KPAGKPIFSE+EK+GGLFSK ARMYLLL+GEIGLMI+NKFFGVVK G IFGELAVIAG+PRSATAMAK C+VLSLDEKQFH AL+K PEFALMLMS+M QR+R SIAKLGT+ S+ P E S+I+D+K LA L L Q P + GKV+++AGAVGA MYVV++G VAIS+G+ VVERVGPGG+FGEMALVDR+ R
Sbjct: 5 DELDFSAKPAPRP---EAVARATAQVAAQSPLYQPAVALEFFRSAGTIEDKPAGKPIFSESEKAGGLFSKNARMYLLLEGEIGLMIQNKFFGVVKPGHIFGELAVIAGLPRSATAMAKINCRVLSLDEKQFHTALEKKPEFALMLMSTMVQRLRESIAKLGTARPASA--PAEHSDILDRKTLAGLRDALAAQEPAGFPAGKVIMSAGAVGAFMYVVLEGRVAISVGDSVVERVGPGGIFGEMALVDRSAR 250
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A1F4D1S7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110 TaxID=1797500 RepID=A0A1F4D1S7_9PROT) HSP 1 Score: 310 bits (794), Expect = 4.860e-103 Identity = 170/253 (67.19%), Postives = 201/253 (79.45%), Query Frame = 1
Query: 7 DDLDFSA-PAPKPAAAEAVARGAVQ--GTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
DDLDFS+ P P AEA AR A Q G AQS Y PALAL FFR+ GT+E KP G+ IF ENEKSGGLFSKGARMYLLL+GE+GLMI+N+FFGVVK G+IFGELAVI +PRSATAMAK++C++LSLDEKQFH AL++TPEFALMLMS M QR+R S+AKLGT+ A P ERS+++DKK LA L ELG Q P + GKV++ AGA GA MYVV++G VAIS+G+ +VE VGPGGMFGEMALVDR+ R
Sbjct: 2 DDLDFSSKPTPH---AEAAARAAAQAQGAAQSPLYQPALALAFFRSAGTLEEKPGGRSIFVENEKSGGLFSKGARMYLLLEGEVGLMIRNQFFGVVKKGDIFGELAVIGALPRSATAMAKTDCRLLSLDEKQFHTALKQTPEFALMLMSIMVQRLRQSLAKLGTTAA---GTPAERSDLLDKKTLAGLRSELGKQDPALFPAGKVIMTAGAAGAFMYVVLEGRVAISVGSSIVEHVGPGGMFGEMALVDRSAR 248
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A6L4YNQ3_9RHOO (Crp/Fnr family transcriptional regulator n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A6L4YNQ3_9RHOO) HSP 1 Score: 240 bits (612), Expect = 1.770e-75 Identity = 141/254 (55.51%), Postives = 171/254 (67.32%), Query Frame = 1
Query: 7 DDLDFSA----PAPKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
DDLDFSA PAPKPA + ++ Y P LALEFF+ GT+E AGKPIF ENEK+ G FSKGAR+YLLLDG++ L +K K +V GEIFGE+A IA VPRSATA A+ C+VLSLDEK F +LQ+ PEFALMLMS M QR+R S+AKL T+ S A V+ +N +DKK+L EL ELG P G+ VV G GA M+VV+ G +AIS+ V+E VGPGG+FGEMALVDR R
Sbjct: 2 DDLDFSAKPAAPAPKPAVKP------IPPGEPASLYEPRLALEFFKIAGTLEQFAAGKPIFLENEKTAGFFSKGARIYLLLDGDVTLTLKGKPLELVLPGEIFGEMAAIAEVPRSATATARKNCRVLSLDEKAFLQSLQQMPEFALMLMSVMAQRLRRSVAKLATAKKSSVAALVQ-NNSLDKKMLVELQHELGDPSPTVAQTGQNVVTQGGTGACMFVVIQGRIAISVDGLVIEHVGPGGIFGEMALVDRIGR 248
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A1G3GXU9_9RHOO (Uncharacterized protein n=1 Tax=Rhodocyclales bacterium GWA2_65_19 TaxID=1802016 RepID=A0A1G3GXU9_9RHOO) HSP 1 Score: 230 bits (587), Expect = 1.090e-71 Identity = 131/250 (52.40%), Postives = 167/250 (66.80%), Query Frame = 1
Query: 7 DDLDFSAPAPKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
+DLDFS A +PA + A + + Y PALAL+FFR GT+E PAGK IF E EK GG FSKGA +YLLLDGE+ L +K K +V GEIFGE+A IA +PRSATA + CKVL+LDEK+F ++Q+ P+FALMLMS M QR+R S+AKL + +S + N +DKK+LA+L +ELG P G VV GAVGA M+V +G +AIS+ VVE V PGG+FGEMAL+DR+ R
Sbjct: 2 EDLDFSGTAAEPA--KKPATDTRPKSEPVSLYEPALALKFFRVAGTLEQFPAGKQIFVEEEKPGGFFSKGASIYLLLDGEVALTLKGKPLELVLPGEIFGEMATIADIPRSATATVRKNCKVLALDEKKFLQSMQQMPDFALMLMSVMAQRLRRSLAKLAAAKK-TSVEALTHKNTLDKKMLADLQRELGDPLPATAAAGATVVTQGAVGACMFVATEGRIAISVDGLVVEHVEPGGVFGEMALIDRSGR 248
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: W0SJY8_9PROT (Crp/Fnr family transcriptional regulator, partial n=1 Tax=Sulfuritalea hydrogenivorans sk43H TaxID=1223802 RepID=W0SJY8_9PROT) HSP 1 Score: 228 bits (581), Expect = 8.500e-71 Identity = 134/254 (52.76%), Postives = 168/254 (66.14%), Query Frame = 1
Query: 7 DDLDFS----APAPKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
DDLDFS APAPKP A P LAL FF+ GT+E AGK IF+ENEK+GGLFSKGAR+YLLLDG++ L +K K +V GEIFGE+A IA +PRSATA A+ C+VLSLDEK F +LQ+ PEFALMLMS M QR+R S+ KL +P +A +E+ N ++ K+L+EL LG P G+ VV GAVGA M+VV G +AIS+ +V+E VGPGG+FGEMAL++R R
Sbjct: 2 DDLDFSGKPAAPAPKPVAKPXXXXX------XXXXXXPRLALAFFKIAGTLEQFAAGKQIFAENEKAGGLFSKGARIYLLLDGDVALTLKGKPLELVLPGEIFGEMAAIADMPRSATATARKACRVLSLDEKAFLQSLQQMPEFALMLMSVMAQRLRRSLVKLAEAPKPPTAA-LEQKNSLNGKILSELQHALGDPLPTTAPAGQNVVTQGAVGACMFVVTKGRIAISVDGKVIEHVGPGGVFGEMALIERAGR 248
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A1G3HTP5_9RHOO (Uncharacterized protein n=1 Tax=Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 TaxID=1802018 RepID=A0A1G3HTP5_9RHOO) HSP 1 Score: 224 bits (571), Expect = 2.660e-69 Identity = 134/250 (53.60%), Postives = 168/250 (67.20%), Query Frame = 1
Query: 7 DDLDFSAPAPKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
++LDFS KPAA A A + ++ Y P LALEFFR GT E PAGK IF ENEK+ G FSKGA +YLLL+G++ L +K K +V GEIFGE+A IA +PRSATA A+ C+VL+LDEK+F ++LQ+ PEFALMLMS M QR+R S+AKL + S A ++ + DKK+LA+L +ELG P G VV GAVGA M+VV G +AISI V+E V PGG FGEMALVDR+ R
Sbjct: 2 ENLDFSG---KPAA-PARTSPASPNSEPTSLYEPKLALEFFRLAGTQEQFPAGKQIFVENEKATGFFSKGAHIYLLLEGDVTLTLKGKPLELVLPGEIFGEMAAIADIPRSATATARKNCRVLALDEKRFLSSLQRMPEFALMLMSVMAQRLRRSVAKLAEAKVGSVAALTHKATL-DKKMLADLQRELGNPTPTTAPAGTNVVTQGAVGACMFVVTGGRIAISIDGVVIEYVEPGGAFGEMALVDRSGR 246
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A537A1L7_9PROT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A1L7_9PROT) HSP 1 Score: 220 bits (561), Expect = 9.120e-68 Identity = 129/254 (50.79%), Postives = 166/254 (65.35%), Query Frame = 1
Query: 1 MADDLDFSAPA--PKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
MADDLDFS PA PKPAA A Q Y PA+A FF + G E +G FSENEK+ L K +MY LL+G++ L+ K K G K GEIFGE+A I+ PRSATA+AKS+C+V+SLD+K F AALQK PEFALM++ +M R+R IA+L P S ++ S + DK LL ++ + LG Q + Y GK+++ AG GA MYVV +G VAISI VV+RVGPGG+FGEMAL+D++PR
Sbjct: 12 MADDLDFSKPAGAPKPAAPAAP---------QVPLYIPAVARTFFESAGKEESVASGTVFFSENEKASRLLLKRDKMYFLLEGQVALLAKGKQIGAPKVGEIFGEMAAISDSPRSATAVAKSDCRVISLDDKGFAAALQKKPEFALMMLGTMIMRLRAMIARLSGIP---STAEMKDSRVFDKNLLNQMIQGLGDQAVVRYEKGKIIMIAGQAGALMYVVTEGRVAISIRGAVVDRVGPGGIFGEMALIDQSPR 253
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A177R0A8_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177R0A8_9PROT) HSP 1 Score: 218 bits (555), Expect = 5.420e-67 Identity = 130/254 (51.18%), Postives = 167/254 (65.75%), Query Frame = 1
Query: 1 MADDLDFSAPA--PKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
M+DDLDFS PA PKPAA A + + Y PA+A FF + G E AG FSEN+K GGLF K +MY L +G++GL +++K G +KAG+IFGE+A I PRSATA A++ CKV+SLD+K F+AALQK PEFALM++ + QR+R +AKL P S+ E + DK LLA L K LG Q Y GKV++ AG GA MYVV++G VAISI VV+ VGPG +FGEMAL+D++PR
Sbjct: 1 MSDDLDFSKPAGSPKPAAPAAAPQAPI--------YVPAIAKAFFESAGKEEQVAAGAVFFSENQK-GGLFKKD-KMYFLAEGQVGLFMQSKPIGTIKAGQIFGEMAAITESPRSATAAAQTPCKVISLDDKGFNAALQKKPEFALMMLGMLIQRLRGMMAKLSGVP--SAGDVKESPRVFDKTLLASLTKGLGDQAQQRYDKGKVIMVAGQTGALMYVVLEGKVAISIRGAVVQYVGPGAVFGEMALIDQSPR 242
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A1F4BC70_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BC70_9PROT) HSP 1 Score: 217 bits (552), Expect = 1.490e-66 Identity = 115/224 (51.34%), Postives = 157/224 (70.09%), Query Frame = 1
Query: 85 AQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
AQS Y PA+ALEFF++ G E GK IF E+E + +FS+GARMYLL+DGE+ L +K K G V GE+FGE+A I+ +PR+ATA+A++ C V+SL+EKQF AAL K+PEFALMLM+ + R+R ++ L + S ++ + DKKLLA+L +E +P + L KV++ G G MYVV DG VAISI +V+E+VGPGG+FGEMALVD++PR
Sbjct: 18 AQSKLYQPAVALEFFKSVGKAESFAPGKSIFVEDEGTASVFSEGARMYLLVDGEVALSVKKKQIGTVAKGEVFGEMASISQLPRTATAVARTPCSVISLNEKQFQAALAKSPEFALMLMNIIISRIRETLFNLTSGGGLSEKDRWNKAAVFDKKLLADLEREFDDKPAAMHPLNKVIMKEGDRGVFMYVVRDGVVAISISEKVIEKVGPGGVFGEMALVDQSPR 241
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Match: A0A536YCX5_9PROT (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YCX5_9PROT) HSP 1 Score: 215 bits (548), Expect = 5.300e-66 Identity = 128/252 (50.79%), Postives = 159/252 (63.10%), Query Frame = 1
Query: 1 MADDLDFSAPAPKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEVKPAGKPIFSENEKSGGLFSKGARMYLLLDGEIGLMIKNKFFGVVKAGEIFGELAVIAGVPRSATAMAKSECKVLSLDEKQFHAALQKTPEFALMLMSSMGQRMRNSIAKLGTSPAFSSAPPVERSNIIDKKLLAELAKELGGQPPIPYGLGKVVVAAGAVGASMYVVMDGHVAISIGNRVVERVGPGGMFGEMALVDRTPR 756
MADDLDF+ P A Y PA+A FF + G E AG +F+ENEK+ LF + +MY LL+GEI L K K G +KAGEIFGE+A I+ PRSATA+AKS C+VLSLD+K F AALQK PEFALM++ +M R+R IAKL P S ++ S + DK L+A + LG + Y GKV++ AG GA MYVV +G VAISI VVERVGPGG+FGEMALVD++PR
Sbjct: 1 MADDLDFTGSLRLPTGPAAPV------------YIPAVARAFFESAGREETLSAGTVLFAENEKASRLFLQRDKMYFLLEGEISLAAKGKPIGALKAGEIFGEMAAISDSPRSATAVAKSPCRVLSLDDKGFAAALQKKPEFALMMLGTMILRLRGMIAKLSGVP---STGELKASRVFDKALIATMINGLGQNAMVRYDQGKVIMVAGQAGALMYVVTEGRVAISIRGAVVERVGPGGIFGEMALVDQSPR 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8212.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8212.3.1 >prot_P-wetherbeei_contig8212.3.1 ID=prot_P-wetherbeei_contig8212.3.1|Name=mRNA_P-wetherbeei_contig8212.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp MADDLDFSAPAPKPAAAEAVARGAVQGTAQSTGYSPALALEFFRATGTVEback to top mRNA from alignment at P-wetherbeei_contig8212:2113..2868+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8212.3.1 ID=mRNA_P-wetherbeei_contig8212.3.1|Name=mRNA_P-wetherbeei_contig8212.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig8212:2113..2868+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8212:2113..2868+ >mRNA_P-wetherbeei_contig8212.3.1 ID=mRNA_P-wetherbeei_contig8212.3.1|Name=mRNA_P-wetherbeei_contig8212.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig8212:2113..2868+ (Phaeothamnion wetherbeei SAG_119_79)back to top |