mRNA_P-wetherbeei_contig8205.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A6H5KYC8_9PHAE (RNase III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYC8_9PHAE) HSP 1 Score: 153 bits (386), Expect = 6.080e-37 Identity = 87/180 (48.33%), Postives = 112/180 (62.22%), Query Frame = 2
Query: 203 QVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPR-SAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKIMADCFEAVLGAMYLDS---QSMAPIHSLLASLIPCY 730
Q +LP +E L YRF DR+LLL ALTH+S+ NE ++GD DELEWLGD+VLQ+A+SSWLF + K R S+ +LS RQRFVD AC +FA QLNL + Y+R+GH Q GTKI+ADCFEAVLGA+Y+D+ + PIH++LA +IP Y
Sbjct: 11 QHSLPVVEHALGYRFGDRRLLLTALTHRSFCNE-THTASGDFDELEWLGDSVLQLAVSSWLFRSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL------------------------------LPYLRIGHGQPVGGTKILADCFEAVLGAVYVDAGGCSDLEPIHAILARVIPSY 159
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A835Z0E4_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E4_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.080e-30 Identity = 82/184 (44.57%), Postives = 106/184 (57.61%), Query Frame = 2
Query: 203 QVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGT--KIMADCFEAVLGAMYLDSQSMAP------IHSLLASLIPCY 730
Q +PA E LRY F ++ LLL+ALTH+SY NE +TGDND LEWLGD+VLQ AIS WL+ + + RS +L+ +RQ+FVD AC +A++L L MR GH Q + GT K+ ADCFEAVLGAMYLDS+SM+P I +LA +IP +
Sbjct: 389 QQLVPAAEAALRYTFSNKLLLLQALTHRSYCNENR-TATGDNDALEWLGDSVLQHAISDWLYNSFAE-RSVHKLTDLRQQFVDTTACADYASRLGLP------------------------------DMMRTGHGQATRGTNTKVSADCFEAVLGAMYLDSRSMSPDAPFVPIFRVLADVIPAF 540
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A835ZIJ8_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 5.350e-18 Identity = 73/194 (37.63%), Postives = 96/194 (49.48%), Query Frame = 2
Query: 197 GRQVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDP-RSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKIMADCFEAVLGAMYLDSQSMA------PIHSLLASLI---PCYARTASA 748
G Q +PA E L Y F D+ LLL+ALT KSYVNE +TGDN +EWLGD VLQ A+S WL+ +T R R++ R+ +VD AC +A L L R + + A G + K+ AD FEAVLGA++LD + A P+ +LA +I C TASA
Sbjct: 59 GLQSLVPAAEEALGYEFLDQMLLLQALTLKSYVNEVE-SATGDNGAMEWLGDCVLQHAVSDWLYTSTAATHRQEGRMTERRKAYVDTTACARYAQCLGLPRLLRTGA----------------------------GASASLTSRKVQADAFEAVLGAVHLDCRDAAAAAVPSPVVRILAKVIRGFACAQATASA 223
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A3M1LL13_9CHLR (Ribonuclease 3 n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LL13_9CHLR) HSP 1 Score: 84.3 bits (207), Expect = 8.410e-15 Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 2
Query: 212 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKI----MADCFEAVLGAMYLDSQSMAPIHSLLASLI 721
L A+E+ L RF DR LLL+ALTH+SY+NE ++ DN LE+LGD VL + WL+ + + RL+ +R V FA QL+L +Y+RLG +E G + + D FEA +GA+YLD Q + + + L LI
Sbjct: 4 LEALESHLGVRFEDRSLLLRALTHRSYLNENPDLALEDNQRLEFLGDAVLDFLTAEWLYHRFPEFQEG-RLTSLRAALVRTATLARFARQLDLG------------------------------TYLRLGRGEEESGGRQRRANLCDAFEAFIGALYLD-QGLEAVRAFLEPLI 145
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A7C1H438_9DELT (Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1H438_9DELT) HSP 1 Score: 84.3 bits (207), Expect = 8.900e-15 Identity = 53/160 (33.12%), Postives = 76/160 (47.50%), Query Frame = 2
Query: 212 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLDS 679
L +E L+YRF D+ LL ALTH+S++NE A S DN+ LE+LGD VL + +S L D Q LS +R V++ A N+ Y+ LGH +E G + ++A+C EAV+GA+Y+DS
Sbjct: 9 LKKLEKTLQYRFEDKSLLSTALTHRSFINENASYSFSDNERLEFLGDAVLGLCVSDILVKKFSDLAEGQ-LSKLRSHLVNESFLAGLAIDFNIG------------------------------DYLLLGHGEERSGGRGKISLLANCMEAVIGAIYMDS 137
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A3M1DRJ7_9CHLR (Ribonuclease 3 n=1 Tax=Thermoflexia bacterium TaxID=2420334 RepID=A0A3M1DRJ7_9CHLR) HSP 1 Score: 84.0 bits (206), Expect = 2.880e-14 Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 2
Query: 206 VALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKI----MADCFEAVLGAMYLDSQSMAPIHSLLASLIPCYARTASAA 751
V L ++ L Y FRDR LLL+ALTH SY++E DN LE+LGD VL + ++ W++ + R + ++ +R V + + FA QL + S +RLG +E G + + D FEA++GA+YLD + P+ +L+ +L+P A T AA
Sbjct: 50 VPLEHLQRQLNYTFRDRGLLLRALTHPSYLHEHPEAGL-DNQRLEFLGDAVLSLTVAEWIYHRYPEFREGE-MTRLRAALVSEESLARFATQLGVG------------------------------SALRLGRGEEERGGRERPANLCDAFEALIGALYLDG-GLEPVQALVRTLVPPIAETILAA 202
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: UPI0009BC4ED3 (ribonuclease III n=1 Tax=Oceanobacillus timonensis TaxID=1926285 RepID=UPI0009BC4ED3) HSP 1 Score: 81.3 bits (199), Expect = 8.610e-14 Identity = 57/187 (30.48%), Postives = 88/187 (47.06%), Query Frame = 2
Query: 206 VALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLDSQSMAPIHSLLASLIPCYARTASAAV 754
+ L +E L F+ +KLL +A TH SYVNE + DN+ LE+LGD VL++A+S +L+ +D + ++ +R V + + FA Q + + Y+ LG +E G + I+AD FEA LGA+YLD A +H L + P A+A+V
Sbjct: 1 MELSQLEQKLGITFQQKKLLKEAFTHSSYVNEYKKIKLNDNERLEFLGDAVLELAVSQYLYRNNQDMPEGE-MTKIRAAIVCEASLTVFAKQFDFGQ------------------------------YILLGKGEEQTGGRQRPAILADAFEAFLGALYLDQGFDAVLHFLNTRIFPALTVDATASV 156
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A7C7UB02_9CHLR (Ribonuclease 3 n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7UB02_9CHLR) HSP 1 Score: 80.9 bits (198), Expect = 1.590e-13 Identity = 53/159 (33.33%), Postives = 74/159 (46.54%), Query Frame = 2
Query: 212 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKI----MADCFEAVLGAMYLD 676
L I+ L +RFRD LLL+ALTH SYVNE +TGDN LE+LGD VL +W++ D R++ +R V A Q+ + ++ +RLGH +E G + + D FEAV+GA+YLD
Sbjct: 16 LRTIQQALGHRFRDLNLLLRALTHPSYVNEHPEDATGDNQRLEFLGDAVLDFVAGAWVYRRYPDFDEG-RMTRLRAALVRTKTLARLARQVGIGKA------------------------------LRLGHGEEEAGGRERDANLCDAFEAVVGALYLD 143
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A3M1DMJ4_9DELT (Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1DMJ4_9DELT) HSP 1 Score: 80.5 bits (197), Expect = 1.740e-13 Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 2
Query: 203 QVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQ-RLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLD 676
+ +L +ET L YRF +R LL+KALTHKSY NE DN+ LE+LGD VL +A+S +F ++PR A+ ++ +R V + + A A +L + +M LG +E G + +++D EA+LGA++LD
Sbjct: 2 EESLCELETALGYRFSNRDLLVKALTHKSYANEHRDAGARDNERLEFLGDAVLDLAVSETIFA--QEPRLAEGEMTRVRAEVVSEPSLAAVARELGVG------------------------------DHMLLGRGEELTGGREKESLLSDAMEAILGAIFLD 132
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: UPI00068E716F (ribonuclease III n=1 Tax=Butyrivibrio sp. AE2032 TaxID=1458463 RepID=UPI00068E716F) HSP 1 Score: 80.1 bits (196), Expect = 2.270e-13 Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 2
Query: 212 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLD 676
L E + Y FRDR LL++ALTH S+VNE+ D + LE+LGD VL+M S++LF D + + +S +R V +GA A QLN+ + Y++LG +E+ G + I+AD EAV+GA++LD
Sbjct: 7 LSRFEKVIGYTFRDRALLVQALTHSSFVNEQKINKKPDYERLEFLGDAVLEMISSAYLFRTYPDKKEGE-MSKIRASLVCEGALAFDAQQLNIKQ------------------------------YIQLGKGEEATGGRNKESIIADVMEAVIGALFLD 134 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8205.1.1 >prot_P-wetherbeei_contig8205.1.1 ID=prot_P-wetherbeei_contig8205.1.1|Name=mRNA_P-wetherbeei_contig8205.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=467bp MEGRGNENGPGGRQVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVback to top mRNA from alignment at P-wetherbeei_contig8205:88..2583+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8205.1.1 ID=mRNA_P-wetherbeei_contig8205.1.1|Name=mRNA_P-wetherbeei_contig8205.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2496bp|location=Sequence derived from alignment at P-wetherbeei_contig8205:88..2583+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8205:88..2583+ >mRNA_P-wetherbeei_contig8205.1.1 ID=mRNA_P-wetherbeei_contig8205.1.1|Name=mRNA_P-wetherbeei_contig8205.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1401bp|location=Sequence derived from alignment at P-wetherbeei_contig8205:88..2583+ (Phaeothamnion wetherbeei SAG_119_79)back to top |