mRNA_P-wetherbeei_contig8151.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: A0A835ZEU5_9STRA (Ribosomal protein L21e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEU5_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.180e-26 Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPG-DAETIQALPFVDLV 237
NGRIL+K I VRVEH+ PSKCRDELK+R+KEN+ K AA+ GA + +LKRQP+QPK A+ L G ETIQALPFVDLV
Sbjct: 81 NGRILKKAITVRVEHIRPSKCRDELKRRVKENEAIKAAARAGAERQNLKRQPKQPKGAYTLVTNGAKPETIQALPFVDLV 160
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: A0A6H5K4I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I4_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 1.360e-24 Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLT-APGDAETIQALPFVDLV 237
NGRI+ K+I+VRVEHV PSKCRDE+K+R+KEN+ AK AA+ G K LKR P QPK A+V++ D ETIQALPFVDLV
Sbjct: 81 NGRIISKQIHVRVEHVSPSKCRDEMKRRVKENEAAKKAAREGGEKQVLKRSPTQPKGAYVVSMGDQDVETIQALPFVDLV 160
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: A0A7S3NED9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NED9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.790e-21 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPGDAETIQALPFVDLV 237
NGRI+ K +NVRVEHV PSKCR EL +R+K N+ AK A+ KV LKR P+QPK+ FV+ P ET+Q +PF DLV
Sbjct: 81 NGRIINKHLNVRVEHVTPSKCRSELIERVKTNEAAKQKARESGEKVPLKRVPKQPKDGFVIAIPEQPETMQPIPFSDLV 159
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: A0A6U1KHN8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KHN8_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.590e-21 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPGDAETIQALPFVDL 234
NGRI+ K +NVRVEHV PSKCRD+LK R+ N+ K AA+ G + +LKRQP QPK F + P + TIQ +PF DL
Sbjct: 81 NGRIINKHLNVRVEHVIPSKCRDDLKARVARNEELKKAARAGGARAALKRQPAQPKGGFTIALPAEVTTIQPIPFSDL 158
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: K0SIK6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SIK6_THAOC) HSP 1 Score: 89.0 bits (219), Expect = 8.710e-21 Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPG-DAE--TIQALPFVDLV 237
NGRILEKRI+VR+EH+ SKC+ E+ +R+K N+ AK AA+ G KV LKR P+ PKE + L APG D E TIQ LPF DLV
Sbjct: 68 NGRILEKRIHVRIEHIRKSKCQKEIIERVKSNEAAKKAAREGGEKVVLKRLPKAPKEGYFLAAPGGDGEITTIQPLPFSDLV 149
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: B5YNM6_THAPS (RL21, ribosomal protein 21, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNM6_THAPS) HSP 1 Score: 87.8 bits (216), Expect = 3.420e-20 Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPG-DAE--TIQALPFVDLV 237
NGRILEKRI+VR+EH+ SKC+ E+ R+K N++AK A+ KV LKR P+QPKE + L APG D E TIQ LPF DLV
Sbjct: 81 NGRILEKRIHVRIEHIRKSKCQKEIIARVKSNELAKAEARKTGVKVDLKRHPKQPKEGYFLAAPGGDGEITTIQPLPFSDLV 162
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: A0A7S4MUJ5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MUJ5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 9.910e-20 Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPG--DAE--TIQALPFVDLV 237
NGRILEKRI+VR+EHV PSKC+ E+ R N+ AK A+ KV+LKRQP+QPKEA+ L PG DAE TIQ LPF DLV
Sbjct: 81 NGRILEKRIHVRIEHVRPSKCQKEILARKVANEEAKKKARETGVKVNLKRQPKQPKEAYFLQNPGGDDAEITTIQPLPFSDLV 163
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: F0YGM5_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGM5_AURAN) HSP 1 Score: 84.0 bits (206), Expect = 1.020e-18 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPGDAETIQALPFVDL 234
NGRI+ K +NVRVEHV PSKC+++L R+ N+ K AK KV+LKRQP QPK FV+TA + TIQ +PF DL
Sbjct: 81 NGRIINKHLNVRVEHVTPSKCQNDLIARVARNEKLKKEAKQSGTKVALKRQPTQPKAGFVITASEEPTTIQPIPFSDL 158
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: A0A7S2XXW3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.480e-18 Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVL-TAPGDAETIQALPFVDLV 237
NGR++ K++ VRVEHVHPSKC+ E+ +R KEN+ AKV A+ KV+L+R P+QPKE + L + +TIQ LPFVDL+
Sbjct: 81 NGRVIIKKVVVRVEHVHPSKCQSEIIRRKKENEAAKVEARKTGVKVNLRRIPKQPKEGYFLKNRDAEIQTIQPLPFVDLL 160
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Match: A0A7S2W5V8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W5V8_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.100e-18 Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 1 NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRQPRQPKEAFVLTAPGD---AETIQALPFVDLV 237
NGRI+EKRI+VR+EH+ PSKC+ E+ R N+ AK AA KV+LKRQP+ PKEA+ ++A G TIQ LPF DL+
Sbjct: 81 NGRIIEKRIHVRIEHIRPSKCQKEIIARKASNEAAKKAAAESGEKVNLKRQPKAPKEAYFVSAAGGDGVVTTIQPLPFSDLI 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8151.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8151.1.1 >prot_P-wetherbeei_contig8151.1.1 ID=prot_P-wetherbeei_contig8151.1.1|Name=mRNA_P-wetherbeei_contig8151.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp NGRILEKRINVRVEHVHPSKCRDELKKRIKENQVAKVAAKGGAPKVSLKRback to top mRNA from alignment at P-wetherbeei_contig8151:4..243+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8151.1.1 ID=mRNA_P-wetherbeei_contig8151.1.1|Name=mRNA_P-wetherbeei_contig8151.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig8151:4..243+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8151:4..243+ >mRNA_P-wetherbeei_contig8151.1.1 ID=mRNA_P-wetherbeei_contig8151.1.1|Name=mRNA_P-wetherbeei_contig8151.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig8151:4..243+ (Phaeothamnion wetherbeei SAG_119_79)back to top |