mRNA_P-wetherbeei_contig8093.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: K8YZ78_NANGC (Mitochondrial import inner membrane translocase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZ78_NANGC) HSP 1 Score: 71.6 bits (174), Expect = 1.340e-13 Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1 MSWWGRGKKEEPPEDGGF---LQESPFGDAGGSDFVAPSS-GGGXXXXXXXXXXXXXXXXXLQEQQKVIFQQVITKLTEISFD-CVDRPGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
MSW+G G K+E ++ + S F ++GG SS G XXXXXXXXXXX + EQQK + Q VI +LTE++F+ C+ +P +SLSS EQ CI ++V KYL TS+FV+GR+ +
Sbjct: 1 MSWFGFGGKKEDTQESSYDFSSSASGFEESGGGVGAYDSSLGXXXXXXXXXXXXXQLEELVMAEQQKALVQSVIARLTEMAFETCITKPASSLSSGEQSCIQATVAKYLDTSEFVLGRVQR 121
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: W7TJX5_9STRA (Mitochondrial protein translocase family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJX5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.780e-11 Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 172 LQEQQKVIFQQVITKLTEISFD-CVDRPGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
+ EQQK + Q VI +LTE++F+ C+ +P +SLSS EQ CI ++V KYL TS+FV+GR+ +
Sbjct: 98 MAEQQKALVQSVIARLTEMAFETCITKPASSLSSGEQSCIQATVAKYLDTSEFVLGRVQR 157
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A8J2T0W3_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0W3_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 8.260e-10 Identity = 46/125 (36.80%), Postives = 63/125 (50.40%), Query Frame = 1
Query: 7 WWGRGKKEEPPEDGGFLQESPFGDAGGSDFVAPSSGG---------GXXXXXXXXXXXXXXXXXLQEQQKVIFQQVITKLTEISFD-CVDR-PGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
++G GKK +DGG E GG +F GG G + EQQ+ + QQVI KLTE+SFD C+ + P ++LS+ E+ CI + V KYL TS+FV+GR K
Sbjct: 7 FFGGGKKSN--DDGGMGPEKTDLAVGGENFGGGDFGGPGSMAAPRVGGAPPGQAATQAELQRAVVAEQQRALVQQVIAKLTEVSFDTCLQKKPDSTLSAGERACIHTVVGKYLDTSEFVLGRSTK 129
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A484EEJ0_BRELC (Mitochondrial import inner membrane translocase subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEJ0_BRELC) HSP 1 Score: 60.5 bits (145), Expect = 2.570e-9 Identity = 56/123 (45.53%), Postives = 73/123 (59.35%), Query Frame = 1
Query: 1 MSWWGRGKKEEPPEDGG---FLQESPFGD--AGGSDFVAPSSGGGXXXXXXXXXXXXXXXXXLQEQQKVIFQQVITKLTEISFD--CVDRPGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
MS++G GKKE P F+ E P D A S APS XXXXXXXXXXXX ++EQQ+ + QQ I+K+T +++D +P + LSS+E+ CI + YL TS FVV RLNK
Sbjct: 1 MSFFGFGKKEPEPSTSSSDSFVYEEPTYDYSAPASFDSAPSXXXXXXXXXXXXXXXXMQQMIMEEQQRALIQQAISKITVLAWDKCSASKPDSELSSKEKDCIKNVTLAYLDTSMFVVHRLNK 123
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A7S0GC03_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GC03_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.630e-9 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 181 QQKVIFQQVITKLTEISFD-CVD-RPGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
QQ++I +QV+TKLTE SF+ C+ +P SLS RE CI ++V K+L TS+F+ GR+ K
Sbjct: 60 QQQMIVEQVVTKLTEASFEKCIQGKPSESLSGRESACIYATVGKWLDTSEFMRGRMEK 117
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A6G0X2Q9_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2Q9_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.930e-9 Identity = 46/122 (37.70%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 1 MSWWG-RGKKEEPPEDGGFLQESPFG--DAGGSDFVAP--SSGGGXXXXXXXXXXXXXXXXXLQEQQKVIFQQVITKLTEISFD--CVDRPGTSLSSREQQCIVSSVNKYLATSQFVVGRLN 345
MSW+G GKKEE P ES F DA S P SS GG ++EQQKV+ QQ I K+T I+++ +P TSLS+ E CI + YL +S F+V +L+
Sbjct: 1 MSWFGFGGKKEEEPAPISSFSESSFSEIDASSSPSYTPAISSSGGTSVNDII----------MEEQQKVLIQQAIAKITAIAWEKCSASKPDTSLSASEISCIQNVTTSYLDSSVFIVRKLS 112
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A482SEV0_9ARCH (Tim10/DDP family zinc finger protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEV0_9ARCH) HSP 1 Score: 61.2 bits (147), Expect = 5.320e-9 Identity = 29/55 (52.73%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 181 QQKVIFQQVITKLTEISFD-CVDRPGTSLSSREQQCIVSSVNKYLATSQFVVGRL 342
QQ++IFQQV+ KLT++SF+ CV +PGTSLS EQ CI ++V K++ SQ ++ R+
Sbjct: 147 QQQMIFQQVMIKLTDLSFERCVTKPGTSLSYSEQTCIQATVGKFVDCSQLILQRV 201
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A2D4C4H2_PYTIN (Mitochondrial import inner membrane translocase subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4H2_PYTIN) HSP 1 Score: 58.5 bits (140), Expect = 1.280e-8 Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 172 LQEQQKVIFQQVITKLTEISFD--CVDRPGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
++EQQ+ + QQ I+K+T I++D +P + LSSRE++CI + YL TS FVV RLNK
Sbjct: 58 MEEQQRALIQQAISKITAIAWDKCSASKPDSELSSRERECIKNVTLAYLDTSMFVVHRLNK 118
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A225WXI6_9STRA (Mitochondrial import inner membrane translocase subunit n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WXI6_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 4.150e-8 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 88 SDFVAPSSGGGXXXXXXXXXXXXXXXXXLQEQQKVIFQQVITKLTEISFD--CVDRPGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
S F APSS XXXXXX ++EQQ+V+ QQ ++K+T +++D +P + LSS+E+ CI + YL TS FVV R+NK
Sbjct: 37 SSFDAPSSAPSSALGXXXXXXAEMQQLIVEEQQRVLIQQAVSKITALAWDKCSASKPDSELSSKERDCIKNVTLAYLDTSMFVVHRINK 125
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Match: A0A7S1UNE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNE0_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.850e-7 Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 1
Query: 1 MSWWGRGKKE-EPPEDGGFLQESPFGDAGGSDFVAPSSGGGXXXXXXXXXXXXXXXXXLQEQQKVIFQQVITKLTEISF-DCVD-RPGTSLSSREQQCIVSSVNKYLATSQFVVGRLNK 348
MS+WG KK PP + F + G APSS L +Q+++ Q VIT L++ +F C+ +P SLS +E CI ++VNK++ T++F++GRL K
Sbjct: 7 MSFWGSSKKPPSPPTETSFSSGDESYNVGTDFSAAPSSA-------PTSGLADMQQFSLALRQQIMVQTVITDLSDTAFAQCITGKPSDSLSGKESACIHATVNKWMDTNEFMMGRLAK 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8093.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8093.2.1 >prot_P-wetherbeei_contig8093.2.1 ID=prot_P-wetherbeei_contig8093.2.1|Name=mRNA_P-wetherbeei_contig8093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp MSWWGRGKKEEPPEDGGFLQESPFGDAGGSDFVAPSSGGGLGGGAPGGAAback to top mRNA from alignment at P-wetherbeei_contig8093:1313..1764+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8093.2.1 ID=mRNA_P-wetherbeei_contig8093.2.1|Name=mRNA_P-wetherbeei_contig8093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=452bp|location=Sequence derived from alignment at P-wetherbeei_contig8093:1313..1764+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8093:1313..1764+ >mRNA_P-wetherbeei_contig8093.2.1 ID=mRNA_P-wetherbeei_contig8093.2.1|Name=mRNA_P-wetherbeei_contig8093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig8093:1313..1764+ (Phaeothamnion wetherbeei SAG_119_79)back to top |