mRNA_P-wetherbeei_contig12934.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12934.1.1
Unique NamemRNA_P-wetherbeei_contig12934.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: A0A7S0M6J6_9CRYP (Protochlorophyllide reductase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M6J6_9CRYP)

HSP 1 Score: 337 bits (863), Expect = 5.600e-112
Identity = 176/275 (64.00%), Postives = 209/275 (76.00%), Query Frame = 1
Query:  106 VSTQDAVIVTGASSGIGLAAAKYLADKGWHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADTG---MIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKS 921
            +ST+ AVI TGASSGIGLAAAK L +KGWHV++A RSFSKAE+AA+  GL  GS+++M  DLAS+ SVR+FV       R + A+VCNAAVWYP+D  PRFTAEGFEE V  NHL HFLL  L+V  +KA      PRVVFL T THNP SIAG +PP+ADLG + GL  + A  G   MIDGK F+PTKAYKDSK CNV+TM+E+ +R A K V +SA+FPGC+AESPLFRDKR WFR IFPLFQKY+TKQ+V V EAGRRVAAVV++ E   S
Sbjct:   69 MSTKTAVI-TGASSGIGLAAAKELTNKGWHVIIAARSFSKAEIAAQTEGLPAGSFTVMPLDLASLNSVRQFVNQIDTQPRQINALVCNAAVWYPRDTAPRFTAEGFEEHVGTNHLAHFLLAGLMVPKLKAAD-GFDPRVVFLGTDTHNPDSIAGKIPPQADLGELSGLTGSDALRGAKSMIDGKAFDPTKAYKDSKACNVLTMKEMHRRFASKGVTFSAIFPGCVAESPLFRDKRDWFRFIFPLFQKYITKQFVPVSEAGRRVAAVVSEEEFCNS 341          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: D8LBZ8_ECTSI (Protochlorophyllide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ8_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 7.410e-112
Identity = 173/270 (64.07%), Postives = 212/270 (78.52%), Query Frame = 1
Query:  127 IVTGASSGIGLAAAKYLADKG-WHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADTGMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            I+TGASSGIGL  AK+LA  G WHV++AVRSF+KAE  AK+ G+   +Y++MN DLAS+ SVR FVA+ KA+     A+VCNAAVW+PKDK PR TA+GFEEA+  NHLGHFLL NLL+D++K      Q RVVF+ T+THNPGSIAG +PP+A LG ++GLA N     MIDG K+EPTKAYKDSKVCNV+ MRE+ KR +   +V SALFPGCIAESPLFR+KRGWFR  FP+FQK+VT+Q VSV+EAGRR+A VV+  +LS SG YW
Sbjct:   93 IITGASSGIGLEGAKFLAASGDWHVILAVRSFAKAEAGAKDLGMDPSTYTVMNLDLASLNSVRNFVAEIKAAKVKPDALVCNAAVWHPKDKKPRRTADGFEEAIGVNHLGHFLLVNLLMDELK------QSRVVFIGTETHNPGSIAGKIPPQAHLGDLDGLAKN---EPMIDGVKYEPTKAYKDSKVCNVLMMREMNKRYSSGGMVVSALFPGCIAESPLFREKRGWFRAGFPVFQKFVTRQLVSVEEAGRRMADVVSSDKLSSSGTYW 353          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: A0A7S1TKW4_9RHOD (Protochlorophyllide reductase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKW4_9RHOD)

HSP 1 Score: 322 bits (826), Expect = 2.860e-105
Identity = 167/280 (59.64%), Postives = 209/280 (74.64%), Query Frame = 1
Query:  115 QDAVIVTGASSGIGLAAAKYLADKG-WHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKA----SGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDM-KAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADTG-MIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            +D V++TG+SSG+GL AAK LA  G W VVMAVRSF+KAE A +EA +   +Y +M+ DLAS+ SVR+FV + K+    +   L A+VCNAAVWYPKDK PRFTA+GFEE V  NHLGHFLL +LLV D+ K+ K    PR+VF+ T+THNP SIAG VPP+ADLG ++GL     +   MIDGKKFEPTKAYKDSKVCN +TM++++ R + + VV SALFPGC+A S LFR+KRGWF   FP FQK +TKQYV+  EAG R+A+VV +   S SGAYW
Sbjct:   70 KDVVVITGSSSGLGLEAAKELAATGDWLVVMAVRSFAKAEKAMREANINPENYRVMSLDLASLTSVRQFVDELKSFLSRARLDLNALVCNAAVWYPKDKKPRFTADGFEEHVGTNHLGHFLLAHLLVSDLHKSAKTGLSPRLVFIGTETHNPDSIAGKVPPQADLGQLQGLLKGLGEEAPMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYSPRGVVVSALFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVTTQEAGHRLASVVANPLYSTSGAYW 349          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: A0A5J4YUK9_PORPP (Protochlorophyllide reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUK9_PORPP)

HSP 1 Score: 318 bits (816), Expect = 8.440e-104
Identity = 167/280 (59.64%), Postives = 204/280 (72.86%), Query Frame = 1
Query:  115 QDAVIVTGASSGIGLAAAKYLADKG-WHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKA----SGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDM-KAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFA-DTGMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            +D V++TGASSG+G+AAAK LA  G W VV+AVRSFSKAE A +EA L   +Y I+  DLAS+ SVR+F    K         L AIVCNAA W+PKDK PR+TA+GFEE V  NHLGHFLL +LL DD+ K+ +    PR+VFL T+THNP SIAG VPP+ADLG + GL      +  MIDGKKFEPTKAYKDSKVCN +TM++++ R   + VV SA+FPGC+A S LFR+KRGWF   FP FQK +TKQYVSV+EAG R+AAVV +   S +GAYW
Sbjct:   67 KDVVVITGASSGLGMAAAKELASTGDWLVVLAVRSFSKAEKALREANLNPKNYRILPLDLASLTSVRQFSESLKTMLAKEKLDLNAIVCNAATWHPKDKKPRYTADGFEEHVGTNHLGHFLLAHLLADDLRKSARTGLAPRLVFLGTETHNPDSIAGKVPPQADLGRLAGLEKGLCGENAMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYGPRGVVVSAMFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVSVEEAGHRLAAVVANPLYSTTGAYW 346          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: S0F3U3_CHOCR (Protochlorophyllide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3U3_CHOCR)

HSP 1 Score: 310 bits (794), Expect = 5.560e-101
Identity = 162/272 (59.56%), Postives = 197/272 (72.43%), Query Frame = 1
Query:  127 IVTGASSGIGLAAAKYLADKG-WHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASG-RPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADT-GMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            IVTGASS IGL AAK LA +G +HVVMAVR+  KAE AAK  G+   SY+++  DLA + SVR FV     +G  P+ A+VCNAA W+P+DK PRFT +GF+E V  NHLGHFLL NLL+  +K  +     R VFLATQTHNP ++ G VPP+ADLG +EGL   F    G IDGKKFEPTKAYKDSKVCN++TM E+ +R     V +SA+FPGCIA+S LFR+KRGWFR +FPLFQ+Y+TKQ V V+EAGRRVA V +D     SG YW
Sbjct:   70 IVTGASSSIGLHAAKELAGRGDYHVVMAVRNPGKAEAAAKAVGMPADSYTVVPLDLARLQSVREFVTAVGVAGVPPVAALVCNAATWHPRDKKPRFTEDGFDETVQVNHLGHFLLANLLLPQLKLNRG----RCVFLATQTHNPDTLPGKVPPQADLGELEGLVGGFKTLPGTIDGKKFEPTKAYKDSKVCNILTMTEMNRRYGTDGVTFSAVFPGCIAQSELFREKRGWFRALFPLFQRYITKQLVPVEEAGRRVALVASDGRFGDSGRYW 337          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: L1JNU2_GUITC (Protochlorophyllide reductase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNU2_GUITC)

HSP 1 Score: 318 bits (815), Expect = 8.300e-101
Identity = 165/272 (60.66%), Postives = 202/272 (74.26%), Query Frame = 1
Query:  124 VIVTGASSGIGLAAAKYL-ADKGWHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADTGMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKA-DKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            V++TGASSGIGL  AK + ADKGWHV+MAVRS+SKA  AA+E G+  G+Y+IMN DLAS++SVR FV   +  GRP+ AIVCNAAVWYP+D  PR T +GFEEAV  NHLGHFLLCNLL+ D+         RVVF+ T+T N G +AG++PP ADLG +EG+A+    T  IDG KFEPTKAYKDSKVCN + MRE+ KR    + ++ +A+FPGCIAESPLFR KR WFR +FP FQK +TKQ+V  + AG+RVA VV D EL   G YW
Sbjct:   97 VVITGASSGIGLQTAKAMSADKGWHVIMAVRSYSKAARAAEEIGMEPGTYTIMNLDLASLSSVRDFVNQLRLLGRPIDAIVCNAAVWYPRDTAPRLTVDGFEEAVGTNHLGHFLLCNLLLGDLPEG----DGRVVFIGTETANDG-LAGLIPPVADLGKLEGMAAGMKST--IDGGKFEPTKAYKDSKVCNAIVMREMNKRYGKSRGLIVNAMFPGCIAESPLFRQKRAWFRWLFPKFQKAITKQFVPEEVAGQRVANVVADEELGVGGTYW 361          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: A0A2V3J6B4_9FLOR (Protochlorophyllide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6B4_9FLOR)

HSP 1 Score: 306 bits (784), Expect = 1.490e-99
Identity = 156/271 (57.56%), Postives = 199/271 (73.43%), Query Frame = 1
Query:  127 IVTGASSGIGLAAAKYLADKG-WHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADT-GMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            IVTGASS IGL AAK L  +G +HVVMAVR+  KA+ AA++  +   SY+++  DLAS+ASVR FV  F++    L ++VCNAA W+P+DK PRFT +G++E V  NHL HFLL NLL+  +K  K     R VFLATQTHNP ++ G +PP+ADLG ++G++S F    G IDGK FEPTKAYKDSKVCN++TM+E+ +R A   V ++A+FPGCIA+S LFR+KRGWFR  FPLFQKYVT+Q V V+EAGRRVA V +D     SG YW
Sbjct:   65 IVTGASSSIGLHAAKELVARGDYHVVMAVRNIEKAKAAAEQLQMPPDSYTLLPIDLASLASVRAFVQKFQSQFSSLNSLVCNAATWHPRDKKPRFTEDGYDETVQVNHLSHFLLANLLLPMLKKTKG----RCVFLATQTHNPDTLPGKIPPQADLGQLQGMSSGFNTLPGTIDGKAFEPTKAYKDSKVCNILTMKEMHRRHASSGVAFTAIFPGCIAQSELFREKRGWFRWFFPLFQKYVTRQMVPVEEAGRRVALVASDGRFGDSGVYW 331          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: A0A654S962_9CYAN (NADPH-protochlorophyllide oxidoreductase n=1 Tax=Chrysosporum ovalisporum TaxID=75695 RepID=A0A654S962_9CYAN)

HSP 1 Score: 303 bits (777), Expect = 3.640e-99
Identity = 153/277 (55.23%), Postives = 204/277 (73.65%), Query Frame = 1
Query:  124 VIVTGASSGIGLAAAKYLADKGWHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAP-----QPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADT-GMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKP-VVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            V++TGASSG+GL AA+ L+ KGW+VVMA R  SKAE AAK  G++  SY++++ DLAS+ SVR FV DF+A+G+ L A+VCNAA++ P  K P  + EG+E  VA NHLGHFLLCNLL++D+K  ++A      +PR+V L T THNP  + G +PPR DLG ++G  + F +   M+DGKKFEP KAYKDSKVCNV+TMREL +R  +   + +S+L+PGC+A + LFR+    F+KIFP+FQKY+T  +VS +EAG RVA VVTD   S+SGAYW
Sbjct:    9 VVITGASSGVGLQAARALSQKGWYVVMACRDLSKAENAAKSLGMSPDSYTVLHIDLASLESVRHFVNDFRATGKSLDALVCNAAIYMPLIKEPLRSPEGYELTVATNHLGHFLLCNLLLEDLKNSRMATPNKLLEPRLVILGTVTHNPKELGGKIPPRPDLGNLQGFTAGFKEPITMVDGKKFEPVKAYKDSKVCNVLTMRELHRRYHESHGITFSSLYPGCVATTALFRNHYPLFQKIFPIFQKYITGGFVSEEEAGNRVAEVVTDPAYSQSGAYW 285          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: A0A1X6NIP3_PORUM (Protochlorophyllide reductase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIP3_PORUM)

HSP 1 Score: 303 bits (775), Expect = 5.820e-99
Identity = 163/273 (59.71%), Postives = 197/273 (72.16%), Query Frame = 1
Query:  127 IVTGASSGIGLAAAKYLADKG-WHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASG-RPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADT--GMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            I+TGASS +G+ AAK L  +G  HVVMAVR  +KA   A E G A+G+Y+I+  DLAS+ SVR FV+ ++A G R L ++VCNAAVWYP+DK PR T +GF+E +  NHLGHFLL NLL+ D+K        RVVFLAT THNP +IAG VPP+A+LG + GL +  A T  G +DG KFEPTKAYKDSKVCNV+TM  L +R A   V+ SA++PGCIA+S LFR KRGWFR  FPLFQKYVTKQYVS +EAGRRVA V   A     G YW
Sbjct:   10 IITGASSSVGMFAAKALVARGDTHVVMAVRDTAKAAKVAAEFGFAEGTYTILPVDLASLDSVRSFVSAYQAGGFRGLSSLVCNAAVWYPRDKEPRLTGDGFDETLQVNHLGHFLLVNLLMGDLKRACG----RVVFLATPTHNPDTIAGKVPPQANLGDLAGLEAAVAGTSSGTVDGGKFEPTKAYKDSKVCNVLTMTALHERAAKDGVIVSAVYPGCIADSELFRQKRGWFRWFFPLFQKYVTKQYVSEEEAGRRVADVAGGAAFGDGGGYW 278          
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Match: UPI0019E4559B (Protochlorophyllide reductase n=1 Tax=Nostocales cyanobacterium LEGE 11386 TaxID=1828825 RepID=UPI0019E4559B)

HSP 1 Score: 302 bits (774), Expect = 8.800e-99
Identity = 155/273 (56.78%), Postives = 203/273 (74.36%), Query Frame = 1
Query:  124 VIVTGASSGIGLAAAKYLADKG-WHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASMASVRRFVADFKASGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHLGHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTMEGLASNFADT-GMIDGKKFEPTKAYKDSKVCNVMTMRELAKR-KADKPVVYSALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVTDAELSKSGAYW 933
            V++TGASSG+GL AA+ L+  G WHVVMA R+ SKAE AAK  G+   SY+IM+ DLAS+ SVR+FV +F+ASG+ L A+VCNAA++ P  K P  + EGFE +VA NHLGHFLLCNLL++D+K+   + +PR++ L T THNP  + G +PPR DLG ++G  + F +   MIDGKKFEP KAYKDSKVCNV+TMREL +R      + +S+L+PGC+A + LFRD    F+K+FP+FQKY+T  +VS +EAG RVA VVTD   S+SGAYW
Sbjct:    9 VVITGASSGVGLQAARALSQMGQWHVVMACRNLSKAEEAAKSVGMQPDSYTIMHLDLASLESVRQFVKEFRASGKSLDALVCNAAIYMPLLKQPLRSPEGFELSVATNHLGHFLLCNLLLEDLKSSP-SSEPRLIILGTVTHNPKELGGKIPPRPDLGDLKGFEAGFKEPISMIDGKKFEPVKAYKDSKVCNVLTMRELHRRYHKSHGITFSSLYPGCVATTALFRDHYPLFQKLFPIFQKYITGGFVSEEEAGNRVAEVVTDPAYSQSGAYW 280          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12934.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0M6J6_9CRYP5.600e-11264.00Protochlorophyllide reductase (Fragment) n=1 Tax=C... [more]
D8LBZ8_ECTSI7.410e-11264.07Protochlorophyllide reductase n=2 Tax=Ectocarpus T... [more]
A0A7S1TKW4_9RHOD2.860e-10559.64Protochlorophyllide reductase n=1 Tax=Erythrolobus... [more]
A0A5J4YUK9_PORPP8.440e-10459.64Protochlorophyllide reductase n=1 Tax=Porphyridium... [more]
S0F3U3_CHOCR5.560e-10159.56Protochlorophyllide reductase n=1 Tax=Chondrus cri... [more]
L1JNU2_GUITC8.300e-10160.66Protochlorophyllide reductase n=1 Tax=Guillardia t... [more]
A0A2V3J6B4_9FLOR1.490e-9957.56Protochlorophyllide reductase n=1 Tax=Gracilariops... [more]
A0A654S962_9CYAN3.640e-9955.23NADPH-protochlorophyllide oxidoreductase n=1 Tax=C... [more]
A0A1X6NIP3_PORUM5.820e-9959.71Protochlorophyllide reductase n=1 Tax=Porphyra umb... [more]
UPI0019E4559B8.800e-9956.78Protochlorophyllide reductase n=1 Tax=Nostocales c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12934contigP-wetherbeei_contig12934:629..1915 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LBZ8
PFAMsadh_short
Model size933
Max annot lvl2759|Eukaryota
KEGG rclassRC01008
KEGG koko:K00218
KEGG ReactionR03845,R06286
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.21e-112
EggNOG OGsCOG1028@1|root,KOG1208@2759|Eukaryota
EC1.3.1.33
Descriptionoxidation-reduction process
Cds size933
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.148364-CDS-P-wetherbeei_contig12934:628..13121683185967.148364-CDS-P-wetherbeei_contig12934:628..1312Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12934 629..1312 +
1683185967.1644447-CDS-P-wetherbeei_contig12934:1666..19151683185967.1644447-CDS-P-wetherbeei_contig12934:1666..1915Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12934 1667..1915 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12934.1.1prot_P-wetherbeei_contig12934.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12934 629..1915 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12934.1.1

>prot_P-wetherbeei_contig12934.1.1 ID=prot_P-wetherbeei_contig12934.1.1|Name=mRNA_P-wetherbeei_contig12934.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=311bp
SLAPASAAQVASRWTMEPKMAAVSATSTASPAKTPVSTQDAVIVTGASSG
IGLAAAKYLADKGWHVVMAVRSFSKAELAAKEAGLAQGSYSIMNCDLASM
ASVRRFVADFKASGRPLGAIVCNAAVWYPKDKTPRFTAEGFEEAVAANHL
GHFLLCNLLVDDMKAPKVAPQPRVVFLATQTHNPGSIAGMVPPRADLGTM
EGLASNFADTGMIDGKKFEPTKAYKDSKVCNVMTMRELAKRKADKPVVYS
ALFPGCIAESPLFRDKRGWFRKIFPLFQKYVTKQYVSVDEAGRRVAAVVT
DAELSKSGAYW
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mRNA from alignment at P-wetherbeei_contig12934:629..1915+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12934.1.1 ID=mRNA_P-wetherbeei_contig12934.1.1|Name=mRNA_P-wetherbeei_contig12934.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1287bp|location=Sequence derived from alignment at P-wetherbeei_contig12934:629..1915+ (Phaeothamnion wetherbeei SAG_119_79)
TCTCTAGCCCCGGCTTCAGCTGCCCAAGTCGCGAGCCGATGGACGATGGA GCCGAAGATGGCGGCTGTCTCAGCGACCTCGACGGCGAGCCCGGCGAAGA CTCCCGTTTCAACCCAGGACGCTGTCATCGTGACGGGGGCGTCGTCGGGC ATCGGGCTGGCGGCCGCCAAGTACCTGGCGGATAAGGGGTGGCACGTGGT GATGGCGGTGCGGTCGTTCAGCAAGGCAGAGCTGGCGGCGAAGGAGGCCG GCCTCGCCCAGGGCTCGTACTCGATCATGAACTGCGACCTCGCCTCCATG GCGTCGGTGCGCAGGTTCGTCGCAGACTTCAAGGCGTCAGGACGGCCGCT TGGCGCCATCGTCTGCAATGCCGCCGTCTGGTACCCCAAGGACAAGACAC CCCGCTTCACGGCTGAGGGCTTTGAAGAGGCGGTCGCAGCCAACCACCTG GGCCACTTCCTGCTCTGCAACCTGCTCGTCGACGACATGAAGGCGCCGAA GGTGGCGCCGCAGCCGCGCGTCGTCTTCCTGGCAACGCAGACGCACAACC CGGGCTCTATCGCCGGCATGGTGCCGCCGCGGGCCGACCTCGGCACGATG GAGGGCCTCGCATCCAACTTCGCCGACACGGGCATGATCGATGGCAAGAA GTTCGAGCCCACGAAGGCCTACAAGGACTCCAAGGTGTGTGTCAGAGAAG GTGTTTTGTGCAGTTCGTGCTTGTTTGCGTGTCGTGTTTCTGAAGAAGTT GTTCTTTCTTGCATTTTTCTCCTGGACGTGTTGGCTTTTGAGTTTGGAGG GCAGTTGCACGGCTGTTGTTGTTATGGCGGCCTAGGTTAATTGTGGCTTG GCGATAGCACCTGGAACGAAGAGAAGTTGGCTTTTTTCTCAGAGTTCGCA TGGCACTCTCCGTGAAAGTTTGTTTAGAGCTTCTATTCTATCGGCCAACT CGGCCACCTTTCGCACCAGCTGCACTCGGTTTTAGAGAAGCTGCCCCTGG ACATTGATAGCCTCCGTTCAACAAACCACCCTGACCAGGTCTGCAACGTG ATGACGATGCGCGAGCTGGCGAAGCGCAAGGCCGACAAGCCCGTCGTTTA CTCGGCCCTCTTCCCGGGCTGCATCGCCGAGTCGCCGCTCTTCCGCGACA AGCGCGGCTGGTTCCGCAAGATCTTCCCGCTCTTCCAGAAGTACGTCACC AAGCAGTACGTCAGCGTCGACGAAGCCGGCCGCCGCGTTGCCGCGGTCGT CACGGACGCGGAGCTTTCCAAGTCGGGCGCGTACTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12934:629..1915+

>mRNA_P-wetherbeei_contig12934.1.1 ID=mRNA_P-wetherbeei_contig12934.1.1|Name=mRNA_P-wetherbeei_contig12934.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig12934:629..1915+ (Phaeothamnion wetherbeei SAG_119_79)
TCTCTAGCCCCGGCTTCAGCTGCCCAAGTCGCGAGCCGATGGACGATGGA
GCCGAAGATGGCGGCTGTCTCAGCGACCTCGACGGCGAGCCCGGCGAAGA
CTCCCGTTTCAACCCAGGACGCTGTCATCGTGACGGGGGCGTCGTCGGGC
ATCGGGCTGGCGGCCGCCAAGTACCTGGCGGATAAGGGGTGGCACGTGGT
GATGGCGGTGCGGTCGTTCAGCAAGGCAGAGCTGGCGGCGAAGGAGGCCG
GCCTCGCCCAGGGCTCGTACTCGATCATGAACTGCGACCTCGCCTCCATG
GCGTCGGTGCGCAGGTTCGTCGCAGACTTCAAGGCGTCAGGACGGCCGCT
TGGCGCCATCGTCTGCAATGCCGCCGTCTGGTACCCCAAGGACAAGACAC
CCCGCTTCACGGCTGAGGGCTTTGAAGAGGCGGTCGCAGCCAACCACCTG
GGCCACTTCCTGCTCTGCAACCTGCTCGTCGACGACATGAAGGCGCCGAA
GGTGGCGCCGCAGCCGCGCGTCGTCTTCCTGGCAACGCAGACGCACAACC
CGGGCTCTATCGCCGGCATGGTGCCGCCGCGGGCCGACCTCGGCACGATG
GAGGGCCTCGCATCCAACTTCGCCGACACGGGCATGATCGATGGCAAGAA
GTTCGAGCCCACGAAGGCCTACAAGGACTCCAAGGTCTGCAACGTGATGA
CGATGCGCGAGCTGGCGAAGCGCAAGGCCGACAAGCCCGTCGTTTACTCG
GCCCTCTTCCCGGGCTGCATCGCCGAGTCGCCGCTCTTCCGCGACAAGCG
CGGCTGGTTCCGCAAGATCTTCCCGCTCTTCCAGAAGTACGTCACCAAGC
AGTACGTCAGCGTCGACGAAGCCGGCCGCCGCGTTGCCGCGGTCGTCACG
GACGCGGAGCTTTCCAAGTCGGGCGCGTACTGG
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