prot_P-wetherbeei_contig8076.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8076.1.1
Unique Nameprot_P-wetherbeei_contig8076.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length218
Homology
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A1I8HJL9_9PLAT (RNA-dependent RNA polymerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HJL9_9PLAT)

HSP 1 Score: 87.0 bits (214), Expect = 3.810e-16
Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 0
Query:   10 VVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVV---SRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMS-HPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELAR 168
            V+ LPTG+GKTLVAA L+A      P  +   LVER+ LV QQ + +   T L + A  GE  +  W +  +   + D  ++T G LL+ +  RR+  L   S + +DE HH     H F  VL L++    P   +PRL G+TASP     G +EG ++L R
Sbjct:  187 VLVLPTGSGKTLVAALLLARMRALNPGRMGALLVERVPLVFQQAKALEADTGLKVAALCGEI-MTSWKIRELLDGAHDLVVITAGALLSLITNRRIPDLSAFSCIVIDECHHASSPRHNFPRVLKLNHQL--PEDMRPRLLGLTASPVEPGDGDSEGQKKLRR 346          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A267H6U2_9PLAT (RNA-dependent RNA polymerase (Fragment) n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H6U2_9PLAT)

HSP 1 Score: 87.0 bits (214), Expect = 3.830e-16
Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 0
Query:   10 VVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVV---SRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMS-HPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELAR 168
            V+ LPTG+GKTLVAA L+A      P  +   LVER+ LV QQ + +   T L + A  GE  +  W +  +   + D  ++T G LL+ +  RR+  L   S + +DE HH     H F  VL L++    P   +PRL G+TASP     G +EG ++L R
Sbjct:  195 VLVLPTGSGKTLVAALLLARMRALNPGRMGALLVERVPLVFQQAKALEADTGLKVAALCGEI-MTSWKIRELLDGAHDLVVITAGALLSLITNRRIPDLSAFSCIVIDECHHASSPRHNFPRVLKLNHQL--PEDMRPRLLGLTASPVEPGDGDSEGQKKLRR 354          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: D8R5H3_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5H3_SELML)

HSP 1 Score: 86.7 bits (213), Expect = 3.900e-16
Identity = 57/163 (34.97%), Postives = 82/163 (50.31%), Query Frame = 0
Query:    8 NSVVCLPTGAGKTLVAAKLIAGT--VVAQPTH-LTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKE---WGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPE 164
            N++VCL TG GKT++A  LI     +  +P   + +FL   +SL  QQ  VI   T L +G Y G T   +   W   +  ++  ++T  +LL+ L   R F  D   L+  DE HHC   HP+A ++   Y+   P A  PR+ GMTASP         GP+
Sbjct:    2 NTIVCLETGCGKTMIAVLLIRSLSHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLYVGTYVGGTSTMDVHWWTTHLQKQEVFVMTPAILLDNL-RHRFFNPDHVELLIFDECHHCAKGHPYANIMSEFYHK--PEAKCPRILGMTASPIVGKGKTWSGPQ 161          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A1I8H5L0_9PLAT (RNA-directed RNA polymerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8H5L0_9PLAT)

HSP 1 Score: 87.0 bits (214), Expect = 4.100e-16
Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 0
Query:   10 VVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVV---SRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMS-HPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELAR 168
            V+ LPTG+GKTLVAA L+A      P  +   LVER+ LV QQ + +   T L + A  GE  +  W +  +   + D  ++T G LL+ +  RR+  L   S + +DE HH     H F  VL L++    P   +PRL G+TASP     G +EG ++L R
Sbjct:  187 VLVLPTGSGKTLVAALLLARMRALNPGRMGALLVERVPLVFQQAKALEADTGLKVAALCGEI-MTSWKIRELLDGAHDLVVITAGALLSLITNRRIPDLSAFSCIVIDECHHASSPRHNFPRVLKLNHQL--PEDMRPRLLGLTASPVEPGDGDSEGQKKLRR 346          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A811K2M8_9BILA (RNA helicase n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811K2M8_9BILA)

HSP 1 Score: 84.7 bits (208), Expect = 2.320e-15
Identity = 70/231 (30.30%), Postives = 110/231 (47.62%), Query Frame = 0
Query:    4 NPSSNSVVCLPTGAGKTLVAAKLIAGTV---------VAQPTHLTLFLVERISLVAQQRRVIAE--QTKLAIGAYSG----ETPVKEWGVVVVSRDCCIVTTGLLLNQ----LGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELARGVLDLCWHMDEARLLVPIQPENRRELEDHLSPPDAEIVPVALPPAER 215
            N   N+V+C PTGAGKT+VAA +I   +         + Q     +F+V  + LV QQ + + +  Q +  +  +SG    +     +  ++ S    I+T  LLLN     L   R+   D  SLV  DE HHC   HP+  ++   Y    P+A +P++ G+TAS G   +   +  E   + +L +C  M    L     PEN +EL +++SPP  E+     P  +R
Sbjct:  321 NEGENTVICAPTGAGKTIVAADIIKQHLERRKFDKFGIEQEISRVVFIVPTVPLVGQQVKQVKKFLQHRWIVTGFSGADGFDNAASRFDSLMKSH-VVIITPQLLLNMMKSILKSERLLVSDF-SLVVFDECHHCTAKHPYKIIME--YIVDSPSALKPQIVGLTASLGIGGNDARDD-ENATKHILRMCVAMKATNLSTVKSPENVQELNEYVSPPVDEVTKCKRPDQDR 546          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A6A1USN1_9ROSI (Uncharacterized protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1USN1_9ROSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.500e-15
Identity = 59/171 (34.50%), Postives = 91/171 (53.22%), Query Frame = 0
Query:    1 MEQNPSSNSVVCLPTGAGKTLVAAKLIAGT--VVAQPT-HLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVVSRDC-----CIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQ--PRLFGMTASPGASASGVTE 161
            +E     N++V L TG+GKTL+A  L+     ++ +P+  + +FLV ++ LV+QQ   +   T L +G Y GE  V  W   +  ++       ++T  +LLN L     F L    ++ MDE HH    HP+A ++   Y+  P  A    PR+FGMTASP  + SGV+E
Sbjct:   30 LEMAIKKNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFIAVFLVPKVVLVSQQAEAVKMHTDLNVGMYCGEMGVDFWDAAIWKQEIEKHEVLVMTPAILLNCL-RHSFFKLSMIKILMMDECHHTRGKHPYASIMTEFYHRQPSYARSGLPRIFGMTASPIKTKSGVSE 199          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: UPI000D72E11E (LOW QUALITY PROTEIN: uncharacterized protein LOC112558611 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72E11E)

HSP 1 Score: 84.3 bits (207), Expect = 3.330e-15
Identity = 69/230 (30.00%), Postives = 108/230 (46.96%), Query Frame = 0
Query:    6 SSNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIA------------------EQTKLAIGAYSGETPVKEWGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELARGVLDLCWHMDEARLLVPIQPENRRELEDHLSPPDAEIVPVALPPAERQL 217
            + ++V+ LPTG GKTLVA   I+  +   PT   LFLV+++ LV QQ R I                   E+ KL +    G    ++ G  +   D  + T     N L E  V      SLV  DEAHHC  SHP+  +L  ++  L P  ++P++ G+TASP    +      EE  + + +L  ++ +A +     P  R +LE   S   A ++P+ +P  E ++
Sbjct: 1153 NDSTVIFLPTGTGKTLVAMMTISYMLTLNPTRPVLFLVDKVLLVLQQARYIINELGSKNFRRPNLQNDHLEERKLKVAVLCGGLNTRD-GTPIYKHDVIVTTAAFCQNLLMEG-VLRWSNLSLVVFDEAHHCTKSHPYNCLLRDYHLKLVPE-SRPKVLGLTASPAGRRT-----KEETLQMLQELLNNLGDACIATVDNPSAREQLEKFSS--SARLIPICVPMTEAEM 1372          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A813NRY6_9BILA (RNA-directed RNA polymerase n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813NRY6_9BILA)

HSP 1 Score: 84.0 bits (206), Expect = 4.650e-15
Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    8 NSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELARGVLDLC 174
            N++V LPTG+GKT+++A LIA      P     F+V+R+ LV QQ   +  Q  L  G + GE   K      +  D  ++T G L+N L  ++++  D   L+F DE HH    H + +++  HYY +     +PR+ GMTASP +     T    ++ + ++ LC
Sbjct:  189 NTIVYLPTGSGKTMISAMLIAHMKRLNPKKKVFFVVDRVPLVFQQSSYLRFQCNLTTGEFCGEN--KALFESQLDADIYVLTAGFLVNMLLLKKLYLEDCSCLIF-DEIHHAKYGHHYVQIIENHYYKID-RKYKPRILGMTASPTSG----TRDQNQMHQDIVRLC 347          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: D3BEQ9_POLPP (Putative RNA helicase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BEQ9_POLPP)

HSP 1 Score: 82.4 bits (202), Expect = 1.370e-14
Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 0
Query:    8 NSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELARGVLDLCWHMDEARLLVPIQPENRRELEDHLSPPDAEIVPVALPPAERQL 217
            N + C+PTG GKT +AA +I       P    LFLVERI LV QQ + I EQT L +    G+  +     +    D  +  + L LN L + +   +++ SL+  DEAHH    H F+ +L  HY  +     +P++ G+TASP   +S +           +  C      R++ P   E + ++E+H +  + ++V +   P E+ L
Sbjct:  226 NIICCIPTGLGKTQIAAMVICKMKQMNPKKRILFLVERIPLVLQQEKYIREQTGLNVLGVHGDMSID--AKLNDHHDVLVSISALFLNLLRDNKG-VMEQYSLIVFDEAHHIVKDHSFSMLLKKHYKDMEDD-VKPKVMGLTASPAGKSSWIDTFISLKVMSCISGC------RIISP-DAETQADIEEHRNTAELQLVELQQHPKEKYL 424          
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: UPI000F54D33C (uncharacterized protein LOC113687008 isoform X2 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F54D33C)

HSP 1 Score: 82.0 bits (201), Expect = 1.940e-14
Identity = 69/207 (33.33%), Postives = 99/207 (47.83%), Query Frame = 0
Query:    7 SNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQ---------------RRVIAEQTK-LAIGAYSGETPVKEWGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAA-QPRLFGMTASPGASASGVTEGPEELARGVLDLCWHMDEARLLVPIQPENRRELED 196
            +N V  LPTG GKTLVAA++IA  +   P+   +FLV+R+ LV QQ                R   E T+ + IGA  GE    E    +  +D  I+T     N L    +   D+ SL+ +DEAHHC   HP+  ++   Y         +P++ G+TASP    S      E+  R +  L  ++ EA LLV  +  N  ELE+
Sbjct:  496 TNGVCFLPTGTGKTLVAAQVIAHMLKLNPSRQVVFLVDRVLLVLQQSDYLRKELGHIRVADERGSFESTRSIRIGAVCGEMRKLEGNARIYEQDVLIITADCYRNHLNNGTL-RFDDVSLIVLDEAHHCNKDHPYNVIIRDFYLQEDVHLGHRPKILGLTASPAGETS-----LEKTTRRLQRLLGNLGEAELLVVTR--NGLELEE 694          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I8HJL9_9PLAT3.810e-1637.42RNA-dependent RNA polymerase n=1 Tax=Macrostomum l... [more]
A0A267H6U2_9PLAT3.830e-1637.42RNA-dependent RNA polymerase (Fragment) n=2 Tax=Ma... [more]
D8R5H3_SELML3.900e-1634.97Uncharacterized protein n=6 Tax=Selaginella moelle... [more]
A0A1I8H5L0_9PLAT4.100e-1637.42RNA-directed RNA polymerase n=1 Tax=Macrostomum li... [more]
A0A811K2M8_9BILA2.320e-1530.30RNA helicase n=1 Tax=Bursaphelenchus okinawaensis ... [more]
A0A6A1USN1_9ROSI2.500e-1534.50Uncharacterized protein n=1 Tax=Morella rubra TaxI... [more]
UPI000D72E11E3.330e-1530.00LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
A0A813NRY6_9BILA4.650e-1532.93RNA-directed RNA polymerase n=1 Tax=Brachionus cal... [more]
D3BEQ9_POLPP1.370e-1430.00Putative RNA helicase n=1 Tax=Polysphondylium pall... [more]
UPI000F54D33C1.940e-1433.33uncharacterized protein LOC113687008 isoform X2 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..187
e-value: 1.3E-4
score: 31.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..152
score: 14.595894
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..207
e-value: 2.0E-36
score: 127.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..153
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 8..152
e-value: 4.0E-11
score: 43.2
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 7..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8076contigP-wetherbeei_contig8076:2187..2840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8076.1.1mRNA_P-wetherbeei_contig8076.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8076 2163..2840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8076.1.1 ID=prot_P-wetherbeei_contig8076.1.1|Name=mRNA_P-wetherbeei_contig8076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp
MEQNPSSNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVA
QQRRVIAEQTKLAIGAYSGETPVKEWGVVVVSRDCCIVTTGLLLNQLGER
RVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTA
SPGASASGVTEGPEELARGVLDLCWHMDEARLLVPIQPENRRELEDHLSP
PDAEIVPVALPPAERQLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR006935Helicase/UvrB_N