mRNA_P-wetherbeei_contig8076.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: UPI000D72E11E (LOW QUALITY PROTEIN: uncharacterized protein LOC112558611 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72E11E) HSP 1 Score: 88.2 bits (217), Expect = 1.950e-16 Identity = 75/243 (30.86%), Postives = 113/243 (46.50%), Query Frame = 1
Query: 1 YQHELLEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIA------------------EQTKLAIGAYSGETPVKEWGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELARGVLDLCWHMDEARLLVPIQPENRRELEDHLSPPDAEIVPVALPPAERQL 675
YQ EL+ N S+ V+ LPTG GKTLVA I+ + PT LFLV+++ LV QQ R I E+ KL + G ++ G + D + T N L E V SLV DEAHHC SHP+ +L ++ L P ++P++ G+TASP + EE + + +L ++ +A + P R +LE S A ++P+ +P E ++
Sbjct: 1142 YQVELMRKAMTNDST--VIFLPTGTGKTLVAMMTISYMLTLNPTRPVLFLVDKVLLVLQQARYIINELGSKNFRRPNLQNDHLEERKLKVAVLCGGLNTRD-GTPIYKHDVIVTTAAFCQNLLMEG-VLRWSNLSLVVFDEAHHCTKSHPYNCLLRDYHLKLVPE-SRPKVLGLTASPAGRRT-----KEETLQMLQELLNNLGDACIATVDNPSAREQLEKFSS--SARLIPICVPMTEAEM 1372
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A6A1USN1_9ROSI (Uncharacterized protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1USN1_9ROSI) HSP 1 Score: 88.2 bits (217), Expect = 1.990e-16 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 16 LEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGT--VVAQPT-HLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVVSRDC-----CIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQ--PRLFGMTASPGASASGVTE 507
LE +E N++V L TG+GKTL+A L+ ++ +P+ + +FLV ++ LV+QQ + T L +G Y GE V W + ++ ++T +LLN L F L ++ MDE HH HP+A ++ Y+ P A PR+FGMTASP + SGV+E
Sbjct: 27 LEALEMAIKKNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFIAVFLVPKVVLVSQQAEAVKMHTDLNVGMYCGEMGVDFWDAAIWKQEIEKHEVLVMTPAILLNCL-RHSFFKLSMIKILMMDECHHTRGKHPYASIMTEFYHRQPSYARSGLPRIFGMTASPIKTKSGVSE 199
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A1I8HJL9_9PLAT (RNA-dependent RNA polymerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HJL9_9PLAT) HSP 1 Score: 87.8 bits (216), Expect = 2.560e-16 Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 1
Query: 16 LEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVV---SRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMS-HPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELAR 528
LE + + V+ LPTG+GKTLVAA L+A P + LVER+ LV QQ + + T L + A GE + W + + + D ++T G LL+ + RR+ L S + +DE HH H F VL L++ P +PRL G+TASP G +EG ++L R
Sbjct: 175 LEAFVEALQRDLVLVLPTGSGKTLVAALLLARMRALNPGRMGALLVERVPLVFQQAKALEADTGLKVAALCGEI-MTSWKIRELLDGAHDLVVITAGALLSLITNRRIPDLSAFSCIVIDECHHASSPRHNFPRVLKLNHQL--PEDMRPRLLGLTASPVEPGDGDSEGQKKLRR 346
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A267H6U2_9PLAT (RNA-dependent RNA polymerase (Fragment) n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H6U2_9PLAT) HSP 1 Score: 87.8 bits (216), Expect = 2.570e-16 Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 1
Query: 16 LEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVV---SRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMS-HPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELAR 528
LE + + V+ LPTG+GKTLVAA L+A P + LVER+ LV QQ + + T L + A GE + W + + + D ++T G LL+ + RR+ L S + +DE HH H F VL L++ P +PRL G+TASP G +EG ++L R
Sbjct: 183 LEAFVEALQRDLVLVLPTGSGKTLVAALLLARMRALNPGRMGALLVERVPLVFQQAKALEADTGLKVAALCGEI-MTSWKIRELLDGAHDLVVITAGALLSLITNRRIPDLSAFSCIVIDECHHASSPRHNFPRVLKLNHQL--PEDMRPRLLGLTASPVEPGDGDSEGQKKLRR 354
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A1I8H5L0_9PLAT (RNA-directed RNA polymerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8H5L0_9PLAT) HSP 1 Score: 87.8 bits (216), Expect = 2.760e-16 Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 1
Query: 16 LEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEWGVVVV---SRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMS-HPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELAR 528
LE + + V+ LPTG+GKTLVAA L+A P + LVER+ LV QQ + + T L + A GE + W + + + D ++T G LL+ + RR+ L S + +DE HH H F VL L++ P +PRL G+TASP G +EG ++L R
Sbjct: 175 LEAFVEALQRDLVLVLPTGSGKTLVAALLLARMRALNPGRMGALLVERVPLVFQQAKALEADTGLKVAALCGEI-MTSWKIRELLDGAHDLVVITAGALLSLITNRRIPDLSAFSCIVIDECHHASSPRHNFPRVLKLNHQL--PEDMRPRLLGLTASPVEPGDGDSEGQKKLRR 346
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: D8R5H3_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5H3_SELML) HSP 1 Score: 87.0 bits (214), Expect = 3.500e-16 Identity = 57/163 (34.97%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 46 NSVVCLPTGAGKTLVAAKLIAGT--VVAQPTH-LTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKE---WGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPE 516
N++VCL TG GKT++A LI + +P + +FL +SL QQ VI T L +G Y G T + W + ++ ++T +LL+ L R F D L+ DE HHC HP+A ++ Y+ P A PR+ GMTASP GP+
Sbjct: 2 NTIVCLETGCGKTMIAVLLIRSLSHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLYVGTYVGGTSTMDVHWWTTHLQKQEVFVMTPAILLDNL-RHRFFNPDHVELLIFDECHHCAKGHPYANIMSEFYHK--PEAKCPRILGMTASPIVGKGKTWSGPQ 161
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A811K2M8_9BILA (RNA helicase n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811K2M8_9BILA) HSP 1 Score: 86.3 bits (212), Expect = 8.430e-16 Identity = 74/242 (30.58%), Postives = 114/242 (47.11%), Query Frame = 1
Query: 1 YQHELLEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGTV---------VAQPTHLTLFLVERISLVAQQRRVIAE--QTKLAIGAYSG----ETPVKEWGVVVVSRDCCIVTTGLLLNQ----LGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASPGASASGVTEGPEELARGVLDLCWHMDEARLLVPIQPENRRELEDHLSPPDAEIVPVALPPAER 669
YQ EL N N+V+C PTGAGKT+VAA +I + + Q +F+V + LV QQ + + + Q + + +SG + + ++ S I+T LLLN L R+ D SLV DE HHC HP+ ++ Y P+A +P++ G+TAS G + + E + +L +C M L PEN +EL +++SPP E+ P +R
Sbjct: 312 YQVELAR--SANEGENTVICAPTGAGKTIVAADIIKQHLERRKFDKFGIEQEISRVVFIVPTVPLVGQQVKQVKKFLQHRWIVTGFSGADGFDNAASRFDSLMKSH-VVIITPQLLLNMMKSILKSERLLVSDF-SLVVFDECHHCTAKHPYKIIME--YIVDSPSALKPQIVGLTASLGIGGNDARDD-ENATKHILRMCVAMKATNLSTVKSPENVQELNEYVSPPVDEVTKCKRPDQDR 546
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A383VNR4_TETOB (Helicase ATP-binding domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VNR4_TETOB) HSP 1 Score: 85.9 bits (211), Expect = 1.030e-15 Identity = 61/176 (34.66%), Postives = 94/176 (53.41%), Query Frame = 1
Query: 1 YQHELLEHMEQNPSSNSVVCLPTGAGKTLVAAKLI--------AGTVVAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKE--------WGVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASP 480
YQ EL+E ++ SN+++ LPTG+GKT +AA++I A A +FL LVAQQ V+ + +A AY G+ K+ W V + D ++T +LL+ L + T+ SL+ +DEAHHC HP+A+++ Y+TL P +P++ G TASP
Sbjct: 6 YQRELIELVK---GSNALIVLPTGSGKTHIAARVIQQQHLPAAAAAKAAGSVKAIVFLAPTNPLVAQQCTVLRDGYGMAARAYHGDGSQKDISSWSADIWAREVAAADVMVMTPDVLLHLLAHGSI-TMRSISLLVIDEAHHCNSDHPYAQIMEDFYHTLEPQ-HRPQVLGFTASP 176
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A444S8V9_VERDA (Dicer-like protein 1 n=1 Tax=Verticillium dahliae TaxID=27337 RepID=A0A444S8V9_VERDA) HSP 1 Score: 85.5 bits (210), Expect = 1.590e-15 Identity = 56/172 (32.56%), Postives = 88/172 (51.16%), Query Frame = 1
Query: 1 YQHELLEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGTV--------VAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEW----GVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASP 480
YQ EL E ++ N + LPTG+GKTL+AA L+ T+ +P + FLVE+++L QQ V+ + I G+ +W + + +V T +L Q R +D+ +L+ DEAHH +HP+A ++ +Y T P +P++FGMTASP
Sbjct: 150 YQIELFERAKRK---NIIAVLPTGSGKTLIAALLLRHTLEQETADRRAGKPKRIAFFLVEKVALALQQHAVLECNLEFPIDRVCGDMVRSDWIKESWMKRWDDNMVMVCTAAILQQCLARSFIRMDQINLLVFDEAHHAKGNHPYARIIKDYYITEPDKERRPKIFGMTASP 318
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Match: A0A3M9Y1Z1_9PEZI (Dicer-like protein 1 n=10 Tax=Verticillium TaxID=1036719 RepID=A0A3M9Y1Z1_9PEZI) HSP 1 Score: 85.5 bits (210), Expect = 1.630e-15 Identity = 56/172 (32.56%), Postives = 88/172 (51.16%), Query Frame = 1
Query: 1 YQHELLEHMEQNPSSNSVVCLPTGAGKTLVAAKLIAGTV--------VAQPTHLTLFLVERISLVAQQRRVIAEQTKLAIGAYSGETPVKEW----GVVVVSRDCCIVTTGLLLNQLGERRVFTLDEGSLVFMDEAHHCGMSHPFAEVLHLHYYTLPPAAAQPRLFGMTASP 480
YQ EL E ++ N + LPTG+GKTL+AA L+ T+ +P + FLVE+++L QQ V+ + I G+ +W + + +V T +L Q R +D+ +L+ DEAHH +HP+A ++ +Y T P +P++FGMTASP
Sbjct: 150 YQIELFERAKRK---NIIAVLPTGSGKTLIAALLLRHTLEQETADRRAGKPKRIAFFLVEKVALALQQHAVLECNLEFPIDRVCGDMVRSDWIKESWMKRWDDNMVMVCTAAILQQCLARSFIRIDQINLLVFDEAHHAKGNHPYARIIKDYYITEPDKERRPKIFGMTASP 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8076.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8076.1.1 >prot_P-wetherbeei_contig8076.1.1 ID=prot_P-wetherbeei_contig8076.1.1|Name=mRNA_P-wetherbeei_contig8076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp MEQNPSSNSVVCLPTGAGKTLVAAKLIAGTVVAQPTHLTLFLVERISLVAback to top mRNA from alignment at P-wetherbeei_contig8076:2163..2840+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8076.1.1 ID=mRNA_P-wetherbeei_contig8076.1.1|Name=mRNA_P-wetherbeei_contig8076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig8076:2163..2840+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8076:2163..2840+ >mRNA_P-wetherbeei_contig8076.1.1 ID=mRNA_P-wetherbeei_contig8076.1.1|Name=mRNA_P-wetherbeei_contig8076.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig8076:2163..2840+ (Phaeothamnion wetherbeei SAG_119_79)back to top |