mRNA_P-wetherbeei_contig12933.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: D7G8G0_ECTSI (Bromodomain and PHD finger-containing protein 1, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G0_ECTSI) HSP 1 Score: 156 bits (395), Expect = 2.150e-40 Identity = 76/145 (52.41%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 229 AGLRGATLAVSCRLCPNRGGALKRCTDGSWAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDIS-MVPRFRWARNCRICATRRGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAA------SLALVALCPTHGKAKL 642
AG+ +TLA CR CPNRGGALKRCTDGSW H++C W+PECCFLD MEPI SI+ RG+ G + +P FR +R C +C T G+AIRC CKF HP CG +AG+VYM++E S+ LVA CP H K+K+
Sbjct: 25 AGVHPSTLA--CRFCPNRGGALKRCTDGSWGHILCAFWIPECCFLDPQKMEPIGSINRRGQAGGVEKFLPSFR-SRKCHVCGTSGGSAIRCHSASCKFHLHPMCGSKAGSVYMEIETTMKRGVDGTEHESVNLVAKCPRHNKSKV 166
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A6H5K8Q2_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Q2_9PHAE) HSP 1 Score: 150 bits (379), Expect = 3.010e-38 Identity = 73/149 (48.99%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 217 LAAMAGLRGATLAVSCRLCPNRGGALKRCTDGSWAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISM-VPRFRWARNCRICATRRGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAA------SLALVALCPTHGKAKL 642
L +A A + CR CPNRGGALKRCTDGSW H++C W+PECCFL MEPI SI+ RG+ G + +P FR +R C +C T G+AIRC CKF HP CG +AG+VYM++E S+ LVA CP H K+K+
Sbjct: 3 LKHLANGMSAARSPVCRFCPNRGGALKRCTDGSWGHILCAFWIPECCFLHPQKMEPIGSINRRGQAGGVEQFLPSFR-SRKCHVCGTSGGSAIRCHSASCKFHLHPMCGSKAGSVYMEIETTMKRGVDGTEHESVNLVAKCPRHNKSKV 150
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A7S1T447_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T447_9CHLO) HSP 1 Score: 128 bits (322), Expect = 2.550e-31 Identity = 70/185 (37.84%), Postives = 87/185 (47.03%), Query Frame = 1
Query: 4 LCEVCGHDTE-EQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAMAGLRGATLAVSCRLCPNRGGALKRCTDGS-WAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATRRGAAIRCRFPGCKFLFHPACGRRAG 552
+C VCG N+IVYCE CD+GVHQ CYG+ +IP G W C PCA A + L G +L +C LCPN+GGA +R DG W H VC W PE +L+E D GD+ RW + C +C + G + C GC F HP C RRAG
Sbjct: 60 VCVVCGEGASVSPNVIVYCERCDIGVHQRCYGVTAIPTGEWFCWPCAKHEEILEARGVPRPQIRPPRWQ---RKARSALEGGSLDTTCALCPNKGGAYRRTADGKQWVHEVCARWHPEV-----SLLEAPPGPDAIVGLGDVRAE---RWEQPCAVCGSSAGVVVPCEASGCSFAAHPICARRAG 233
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A8C4ARD2_9TELE (Bromodomain and PHD finger-containing protein 3-like n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4ARD2_9TELE) HSP 1 Score: 130 bits (327), Expect = 2.840e-31 Identity = 72/215 (33.49%), Postives = 103/215 (47.91%), Query Frame = 1
Query: 4 LCEVCGHDT-EEQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAMAGLRGATLAVSCRLCPNRGGALKRCTDGSWAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATR-RGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAAS-----LALVALCPTH 627
C +C D N+I++C+ C++ VHQ CYG+ IP G W C C L+ + V C LCPNRGGA K+ +DGSWAHV+C IW+PE CF + +EP+ + +P RW C +C + RGA+I+C C FH C +RAG ++M +E + +AAA+ + A C H
Sbjct: 252 FCCICLDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRRC--------------------------------LQSPSRPVDCVLCPNRGGAFKQTSDGSWAHVICAIWIPEVCFANTVFLEPVEGVKN---------IPPARWKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQRAG-LFMKIEPVREAAANGTTFAVKKTAFCENH 424
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A150GR46_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GR46_GONPE) HSP 1 Score: 130 bits (327), Expect = 2.950e-31 Identity = 83/215 (38.60%), Postives = 104/215 (48.37%), Query Frame = 1
Query: 4 LCEVCGHDTE-EQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAM-AGLRGATLAVSCRLCPNRGGALKRCTDGS-WAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATRRGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAASLALVALCPTHGKAK 639
LC VCG T + N+IV+CE CD+ VHQ CYG+RSIP W C PC ++ A L G + AVSC LCP R GA KR TD + WAHVVC +W + ++ P D G I RFR C +C GA ++C F C+ FHP CGRRAGN Y+ M+ A +L A C H A+
Sbjct: 654 LCAVCGDGTSVDPNMIVFCERCDIAVHQLCYGVRSIPADEWLCWPCRFYEDQQRAQGVPQNEIRPKRWEMEARGITHAELPGGSHAVSCCLCPVRMGAFKRTTDSTKWAHVVCSMWH------EGPVVHPFDGPDAIDNLGQIK-ADRFRSP--CALCGKVAGAVVKCNFGHCQAYFHPLCGRRAGN-YLCAR-MQPGARTLRYRAYCHNHSNAQ 857
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A8J4XGF5_CLAMG (Bromodomain and PHD finger-containing protein 3-like (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4XGF5_CLAMG) HSP 1 Score: 130 bits (326), Expect = 3.750e-31 Identity = 70/195 (35.90%), Postives = 97/195 (49.74%), Query Frame = 1
Query: 7 CEVCGHDT-EEQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAMAGLRGATLAVSCRLCPNRGGALKRCTDGSWAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATR-RGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMED 585
C VC D N+I++C+ C++ VHQ CYG+ IP G W C C L+ + V C LCPNRGGA K+ +DGSWAHVVC IW+PE CF + +EP+ ++ +P RW C +C R RGA+I+C C FH C +RAG ++M +E ++D
Sbjct: 197 CCVCLEDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRRC--------------------------------LQSPSRPVDCVLCPNRGGAFKQASDGSWAHVVCAIWIPEVCFANTVFLEPVEGVNN---------IPPARWKLICYLCKQRGRGASIQCHKTSCYRAFHVTCAQRAG-LFMKIEPVQD 349
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: UPI000B9031AF (peregrin-like n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B9031AF) HSP 1 Score: 127 bits (318), Expect = 1.340e-30 Identity = 80/214 (37.38%), Postives = 102/214 (47.66%), Query Frame = 1
Query: 4 LCEVCGH-DTEEQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAMAGLRGATLAVSCRLCPNRGGALKRCTDGS---WAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATRRGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAASLALVALCPTHGK 633
+C VC + E+ N I++C+ C++ VHQACYG++ IP+G W C PC A L A L CRLCPN+GGALK S WAHV C W+PE L EPI I S + + R A C IC + GA I+C++ CK FHP C R G + MD+ DA A L L A C TH +
Sbjct: 322 ICAVCADPNVEKDNEILFCDKCNVPVHQACYGVQKIPKGNWYCNPCNA-----------------------------NLNTAELP--CRLCPNKGGALKPVLSPSMNTWAHVFCAWWIPEVKMQSTKLQEPIMGI---------SSIDKRRLALVCCICKVKMGAPIQCKYGPCKRAFHPTCARATG-LRMDMA-DGDADADLKLEAFCETHSR 493
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A8C1E8I7_CYPCA (Bromodomain and PHD finger containing, 3a n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1E8I7_CYPCA) HSP 1 Score: 127 bits (319), Expect = 2.080e-30 Identity = 71/214 (33.18%), Postives = 101/214 (47.20%), Query Frame = 1
Query: 7 CEVCGHDT-EEQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAMAGLRGATLAVSCRLCPNRGGALKRCTDGSWAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATR-RGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAAS-----LALVALCPTH 627
C VC D N+I++C+ C++ VHQ CYG+ IP G W C C L+ + V C LCPNRGGA K+ +DGSWAHV+C IW+PE CF + +EP+ + +P RW C +C + RGA+I+C C FH C +RAG +YM ++ + + A+ + A C H
Sbjct: 213 CCVCLDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRRC--------------------------------LQSPSRPVDCVLCPNRGGAFKQTSDGSWAHVICAIWIPEVCFANTVFLEPVEGVKN---------IPPARWKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQRAG-LYMKIDPVRETGANGTTFTVKKTAYCENH 384
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A3N0XFN4_ANAGA (Bromodomain and PHD finger-containing protein 3 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XFN4_ANAGA) HSP 1 Score: 127 bits (320), Expect = 2.450e-30 Identity = 71/214 (33.18%), Postives = 101/214 (47.20%), Query Frame = 1
Query: 7 CEVCGHDT-EEQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAMAGLRGATLAVSCRLCPNRGGALKRCTDGSWAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATR-RGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAA-----SLALVALCPTH 627
C VC D N+I++C+ C++ VHQ CYG+ IP G W C C L+ + V C LCPNRGGA K+ +DGSWAHV+C IW+PE CF + +EP+ + +P RW C +C + RGA+I+C C FH C +RAG +YM ++ + + A ++ A C H
Sbjct: 251 CCVCLDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRRC--------------------------------LQSPSRPVDCVLCPNRGGAFKQTSDGSWAHVICAIWIPEVCFANTVFLEPVEGVKN---------IPSARWKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQRAG-LYMKIDPVRETGAHGTTFTVKKTAYCENH 422
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Match: A0A8C1EAS1_CYPCA (Bromodomain and PHD finger containing, 3a n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EAS1_CYPCA) HSP 1 Score: 127 bits (319), Expect = 3.100e-30 Identity = 71/214 (33.18%), Postives = 101/214 (47.20%), Query Frame = 1
Query: 7 CEVCGHDT-EEQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARAXXXXXXXXXXXXXXXXXXVDPLAAMAGLRGATLAVSCRLCPNRGGALKRCTDGSWAHVVCCIWVPECCFLDQALMEPIASIDTRGRTGDISMVPRFRWARNCRICATR-RGAAIRCRFPGCKFLFHPACGRRAGNVYMDLELMEDAAAS-----LALVALCPTH 627
C VC D N+I++C+ C++ VHQ CYG+ IP G W C C L+ + V C LCPNRGGA K+ +DGSWAHV+C IW+PE CF + +EP+ + +P RW C +C + RGA+I+C C FH C +RAG +YM ++ + + A+ + A C H
Sbjct: 263 CCVCLDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRRC--------------------------------LQSPSRPVDCVLCPNRGGAFKQTSDGSWAHVICAIWIPEVCFANTVFLEPVEGVKN---------IPPARWKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQRAG-LYMKIDPVRETGANGTTFTVKKTAYCENH 434 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12933.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12933.1.1 >prot_P-wetherbeei_contig12933.1.1 ID=prot_P-wetherbeei_contig12933.1.1|Name=mRNA_P-wetherbeei_contig12933.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp ELCEVCGHDTEEQNLIVYCEDCDMGVHQACYGIRSIPRGAWRCGPCAAARback to top mRNA from alignment at P-wetherbeei_contig12933:88..1068- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12933.1.1 ID=mRNA_P-wetherbeei_contig12933.1.1|Name=mRNA_P-wetherbeei_contig12933.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig12933:88..1068- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12933:88..1068- >mRNA_P-wetherbeei_contig12933.1.1 ID=mRNA_P-wetherbeei_contig12933.1.1|Name=mRNA_P-wetherbeei_contig12933.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig12933:88..1068- (Phaeothamnion wetherbeei SAG_119_79)back to top |