mRNA_P-wetherbeei_contig8057.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8057.3.1
Unique NamemRNA_P-wetherbeei_contig8057.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A3C0TYC3_9PROT (MBL fold metallo-hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYC3_9PROT)

HSP 1 Score: 535 bits (1379), Expect = 4.650e-192
Identity = 244/262 (93.13%), Postives = 257/262 (98.09%), Query Frame = 1
Query:    1 GRSWDAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWLNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKLKV 786
            GRSWDAIE ERDWLEPHFLLPKDK K+GVLQASLHT++IRTPKHNILVDTCVGNHKPR SLPAWNMMNSDYL+KIAALG +PEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEY+HWLN+KDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDD IWLEPTPGHTPGSVCINLSSGGGSA+FTGDAIHHPIQIAYPEWSTAFCSDA+GSEASRRKII+KICDTDTYI+AAHFMDPT+AR+VRNKDRWKLKV
Sbjct:   30 GRSWDAIEEERDWLEPHFLLPKDKMKKGVLQASLHTYVIRTPKHNILVDTCVGNHKPRTSLPAWNMMNSDYLSKIAALGVRPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYDHWLNNKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDAIWLEPTPGHTPGSVCINLSSGGGSALFTGDAIHHPIQIAYPEWSTAFCSDASGSEASRRKIISKICDTDTYILAAHFMDPTVARIVRNKDRWKLKV 291          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A3C0TYB6_9PROT (MBL fold metallo-hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYB6_9PROT)

HSP 1 Score: 427 bits (1097), Expect = 4.300e-149
Identity = 187/262 (71.37%), Postives = 222/262 (84.73%), Query Frame = 1
Query:    1 GRSWDAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWLNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKLKV 786
            G +W+A+E +RDWLEPHFL PK +G+ GVL  SLHT++IRTP  N+LVDTCVGN + R ++P WNMMN+DYLAKIAA G +PE+IHYVMCTHLHFDHVGWNTKLENGRWVPTFP ARYIF KTEY++W + +D  AMD SF DS+LPVVEAGRADLVK DFAIDDTIWLEP+PGH+PG VCINL SG  SA+FTGDA HHP+Q+AYPEW     +D A S A+RR+I++++CDT TY++AAHFMDPTI RVV NKDRWKL+V
Sbjct:   30 GSTWEAVEAQRDWLEPHFLAPKGQGRDGVLDCSLHTYIIRTPHFNVLVDTCVGNDRQRAAIPDWNMMNTDYLAKIAAAGLRPEDIHYVMCTHLHFDHVGWNTKLENGRWVPTFPRARYIFHKTEYDYWKDHQDHFAMDNSFADSILPVVEAGRADLVKGDFAIDDTIWLEPSPGHSPGHVCINLKSGRDSALFTGDAFHHPVQVAYPEWGIFADTDPAQSSATRRRILDRLCDTPTYMLAAHFMDPTIVRVVSNKDRWKLRV 291          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A352KA04_9PROT (MBL fold metallo-hydrolase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KA04_9PROT)

HSP 1 Score: 415 bits (1066), Expect = 2.510e-144
Identity = 184/260 (70.77%), Postives = 218/260 (83.85%), Query Frame = 1
Query:    7 SWDAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWLNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKLKV 786
            SW+A+E +RDW+EPHFL PK +   G+L+ASLHT+LIRTP+HNIL+DTC+GNHK R     W+MMN+DYLAKIAALGAKPEEI +VMCTHLH DHVGWNT+LENGRWVPTFPNARYIF KTEY+HW  +   HAMDG+FEDSV+P+V+AG ADLV +D AIDD IWLEPTPGHTPG V INL SG  SA+FTGD+ HHPIQ+A+P+W T+  +D A S ASRRK + K+CDTD+Y++AAHFMDPT A VVRN D WKLKV
Sbjct:   32 SWEALETQRDWMEPHFLTPKGELPDGLLKASLHTYLIRTPQHNILIDTCMGNHKERTIFDEWSMMNTDYLAKIAALGAKPEEIDFVMCTHLHVDHVGWNTQLENGRWVPTFPNARYIFHKTEYDHWAENPVHHAMDGAFEDSVIPIVDAGLADLVNADHAIDDRIWLEPTPGHTPGHVSINLKSGNDSALFTGDSFHHPIQVAFPDWGTSVDTDTALSSASRRKTLEKLCDTDSYMLAAHFMDPTAAHVVRNGDSWKLKV 291          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A2A4LWZ8_9GAMM (MBL fold metallo-hydrolase n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A4LWZ8_9GAMM)

HSP 1 Score: 416 bits (1070), Expect = 6.940e-144
Identity = 183/259 (70.66%), Postives = 217/259 (83.78%), Query Frame = 1
Query:   10 WDAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWLNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKLKV 786
            WD IE +RDWLEPHFL PKDK ++G L ASLHTF++RTP HNIL+DTCVGNHK R+ LP WNMM+SDY++K+A +G    +I +VMCTHLH DHVGWNT+LE+GRWVPTFP ARY F KTEY+HW  ++D H MDG+F+DSVLPVVEAGRADLV  DFAIDDTIWLEP+PGHTPG VCIN++S G S +FTGD+ HHP+QIAYPEWSTAFCSD   S  +R+ I+NK+ DTDTYI+AAHF DPT ARVV N+DR KLK+
Sbjct:  103 WDTIESQRDWLEPHFLPPKDKMRKGFLDASLHTFVVRTPHHNILIDTCVGNHKERSILPDWNMMDSDYISKLANMGLATGDIDFVMCTHLHVDHVGWNTQLEDGRWVPTFPKARYXFHKTEYDHWQENRDHHGMDGAFDDSVLPVVEAGRADLVAGDFAIDDTIWLEPSPGHTPGHVCINVASRGASGLFTGDSFHHPVQIAYPEWSTAFCSDIVQSGVARKDILNKLVDTDTYILAAHFNDPTAARVVSNRDRCKLKL 361          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A3C0TYI1_9PROT (MBL fold metallo-hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYI1_9PROT)

HSP 1 Score: 367 bits (941), Expect = 2.610e-125
Identity = 162/258 (62.79%), Postives = 202/258 (78.29%), Query Frame = 1
Query:   13 DAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWLNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKLKV 786
            +A++ ER W+EPHF+ PK  G  G LQA L  ++IRT KH ILVDTCVGN KPR   PAWNM  + +L+ +AA+G   E + +V+CTHLH DHVGWNT+LENGRW PTFPNARYIF KTEYE+W + +DG   DG F+DSVLPVVEAG+ADLVKSD+AIDDT+WLEP+PGHTPG + INL +GG SA+FTGD+ HHP+Q+AYPEWS+  C+D   S A+R+K + ++CDTDTY++ AHF  PT  RV RN  RWKL+V
Sbjct:   39 EAVDAERSWMEPHFIKPKSDG--GRLQAGLFAYVIRTGKHVILVDTCVGNDKPRQFTPAWNMKQTTWLSDLAAMGVPAEAVTHVLCTHLHVDHVGWNTRLENGRWAPTFPNARYIFHKTEYEYWESTRDGVGSDGCFDDSVLPVVEAGKADLVKSDYAIDDTMWLEPSPGHTPGHIFINLKNGGQSALFTGDSFHHPVQVAYPEWSSFACTDKEQSAATRQKTVERLCDTDTYMLGAHFAAPTAGRVRRNGGRWKLEV 294          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A352KCH5_9PROT (MBL fold metallo-hydrolase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KCH5_9PROT)

HSP 1 Score: 354 bits (908), Expect = 2.920e-120
Identity = 159/256 (62.11%), Postives = 194/256 (75.78%), Query Frame = 1
Query:   19 IEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWLNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKLKV 786
            I+ +RDWLEPHF+ PK  G  G +   + T++IRT +H ILVDTCVGN K R   P W+M  + +L  + A+G  PE + +VMCTHLH DHVGWNT+L +GRWVPTFPNARYIF KTEYE W   +D  AMDG F+DSVLPVVEAG ADLV SD+A++D IWLEP+PGHTPG VCINL  GG  A+FTGD+ HHP+Q+AYPEWS+AFCSD   S  +R +I+ K+CDTD+Y+MAAHF  PT  RVV N DR KL+V
Sbjct:   41 IDAQRDWLEPHFMKPKSIG--GGMLGGIFTYVIRTDRHTILVDTCVGNDKERTMTPNWHMKQTGWLDDLRAMGVAPESVDFVMCTHLHVDHVGWNTQLVDGRWVPTFPNARYIFHKTEYEAWEKSQDNPAMDGCFKDSVLPVVEAGNADLVTSDYAVNDAIWLEPSPGHTPGHVCINLKGGGKHALFTGDSFHHPLQVAYPEWSSAFCSDKQMSADTRHRIVEKLCDTDSYMMAAHFAAPTAGRVVANGDRCKLQV 294          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A2E4XW81_9PROT (MBL fold metallo-hydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XW81_9PROT)

HSP 1 Score: 304 bits (779), Expect = 1.100e-100
Identity = 135/261 (51.72%), Postives = 186/261 (71.26%), Query Frame = 1
Query:   13 DAIEGER-DWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHW----LNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKL 780
            DA E ER DWL+PHF+   D G+   L  SLH+++I+TP+H ILVDTCVGNHK R     W+M +  +L  + A+G  PE + +VMCTHLH DH+GWNTKLE+GRWVPTFPNA+Y+F + EY HW    + +  G+    +++DSVLPVVEAG+A +V     ++D++++E +PGHTPG   ++L S  G A+FTGD +HHP+Q+AYPEW++ +C D   S A+RR+I+ +  DTDT ++AAHF DP  AR+V N  RWKL
Sbjct:   34 DAFEAERRDWLDPHFV-DADSGR---LLMSLHSYIIKTPQHTILVDTCVGNHKHRPDTKPWHMKDGPFLEDMVAMGVTPESVDFVMCTHLHVDHIGWNTKLEDGRWVPTFPNAKYLFHEDEYAHWKTAEMPEGSGNTRREAYDDSVLPVVEAGQAVMVSDGHQLEDSVYVESSPGHTPGHAFLHLDSPDGRAVFTGDCMHHPVQVAYPEWNSRYCFDPPKSAATRREIVERCADTDTVVLAAHFADPVAARIVSNGTRWKL 290          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A2E9Y0U4_9PROT (MBL fold metallo-hydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y0U4_9PROT)

HSP 1 Score: 300 bits (769), Expect = 3.520e-99
Identity = 140/259 (54.05%), Postives = 178/259 (68.73%), Query Frame = 1
Query:   13 DAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWLNDKD----GHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWK 777
            +AI    DWL PHFL        G +  S+H ++IRT  H ILVDTC+GN KPR S P WN + + +L  +AA+GA PE++ +VMCTHLH DHVGWNT+L +GRWVPTFP A+YI  K EYEHW    D      + DG FEDSVLPV+ AG+A LV  D A+DD +WL PTPGH+PG VC+NLS+GG +A+F+GD +HH +Q+A+PEW++ FC D   S ASRRK + +   TDT I+AAHF  PT   +V N  R K
Sbjct:   34 EAIAAXHDWLLPHFL----HEASGRMIQSVHAYVIRTGHHTILVDTCIGNDKPRASTPPWNNLQTPWLDDLAAIGATPEDVDFVMCTHLHEDHVGWNTQLLDGRWVPTFPYAKYISEKHEYEHWSTADDDMGGAGSNDGCFEDSVLPVMAAGQAVLVDGDHALDDQMWLNPTPGHSPGHVCMNLSAGGRNAVFSGDLLHHAVQVAHPEWNSRFCWDGEMSRASRRKFVKQNAGTDTLILAAHFPSPTAGTIVSNGPRCK 288          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A2E4GUZ5_9PROT (MBL fold metallo-hydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4GUZ5_9PROT)

HSP 1 Score: 300 bits (767), Expect = 7.310e-99
Identity = 130/261 (49.81%), Postives = 183/261 (70.11%), Query Frame = 1
Query:   13 DAIEGE-RDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHW----LNDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKL 780
            DA E E  DWL+P+F+      + G L  SLH+++I+TPKH I+VDTCVGNHK R    AW+M +  +L K+ A+G  PE + +VMCTHLH DHVGWNTKLE+GRW+PTFPNA+Y+F + EY HW    +++  G+    ++EDSVLP+V AG+A +V     ++D++++E +PGHTPG   + L    G A+FTGD +HHP+Q+AYPEW++ +C D   S A+RR I+ +  DTDT ++AAHF +P  AR++   DRWKL
Sbjct:   34 DAFEDECHDWLKPYFV----DAESGRLLMSLHSYIIKTPKHTIIVDTCVGNHKHRPDTNAWHMKDGPFLNKMIAMGVAPESVDFVMCTHLHVDHVGWNTKLEDGRWIPTFPNAKYLFHEDEYAHWETEEMSEGAGNTRRAAYEDSVLPIVNAGQAIMVNDGHQLEDSLYVESSPGHTPGHAFLRLECPNGGAVFTGDCMHHPVQVAYPEWNSRYCFDPEKSAATRRDIVERCADTDTVVLAAHFAEPVAARIISKGDRWKL 290          
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Match: A0A7Y4TZM6_9DELT (MBL fold metallo-hydrolase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4TZM6_9DELT)

HSP 1 Score: 293 bits (750), Expect = 2.270e-96
Identity = 133/261 (50.96%), Postives = 178/261 (68.20%), Query Frame = 1
Query:   13 DAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDTCVGNHKPRNSLPAWNMMNSDYLAKIAAL-GAKPEEIHYVMCTHLHFDHVGWNTKLENGRWVPTFPNARYIFAKTEYEHWL--NDKDGHAMDGSFEDSVLPVVEAGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHHPIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIARVVRNKDRWKLKV 786
            + IE  + WL PHFL        G+   S+HT++IRT  H ILVDTCVGN K R+  P+W+ M   YL  +  + G KPE++ YV+CTHLH DHVGWNT+L NG+WVPTFPNA+Y+FA+ E+E W   ++KD    DGS  DSV+P+V AG+A LV+ D AIDD ++LEPTPGHTPG VC+++  GG   I TGD +HHP+Q A P+WS+ FC+D   S A+RR  + +  DT   I+AAHF  PT+  +V   + ++LKV
Sbjct:   34 EVIESHKHWLAPHFL-----DANGMFIMSIHTYVIRTKHHTILVDTCVGNDKDRSLFPSWSKMQGPYLQTLEQVAGVKPEQVDYVLCTHLHVDHVGWNTRLVNGKWVPTFPNAKYLFARKEWEFWKQESEKDAGTGDGSIVDSVVPIVAAGKAVLVEGDHAIDDQVFLEPTPGHTPGHVCVHVKGGGKEVIMTGDMMHHPVQTAEPQWSSGFCADPKASAATRRAFLERNADTGRMILAAHFATPTVGTIVPAGNAFRLKV 289          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8057.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TYC3_9PROT4.650e-19293.13MBL fold metallo-hydrolase n=1 Tax=Alphaproteobact... [more]
A0A3C0TYB6_9PROT4.300e-14971.37MBL fold metallo-hydrolase n=1 Tax=Alphaproteobact... [more]
A0A352KA04_9PROT2.510e-14470.77MBL fold metallo-hydrolase n=2 Tax=Alphaproteobact... [more]
A0A2A4LWZ8_9GAMM6.940e-14470.66MBL fold metallo-hydrolase n=1 Tax=Cellvibrionales... [more]
A0A3C0TYI1_9PROT2.610e-12562.79MBL fold metallo-hydrolase n=1 Tax=Alphaproteobact... [more]
A0A352KCH5_9PROT2.920e-12062.11MBL fold metallo-hydrolase n=3 Tax=Alphaproteobact... [more]
A0A2E4XW81_9PROT1.100e-10051.72MBL fold metallo-hydrolase n=1 Tax=Rhodospirillace... [more]
A0A2E9Y0U4_9PROT3.520e-9954.05MBL fold metallo-hydrolase n=1 Tax=Rhodospirillace... [more]
A0A2E4GUZ5_9PROT7.310e-9949.81MBL fold metallo-hydrolase n=1 Tax=Rhodospirillace... [more]
A0A7Y4TZM6_9DELT2.270e-9650.96MBL fold metallo-hydrolase n=1 Tax=Deltaproteobact... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8057contigP-wetherbeei_contig8057:2116..2904 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1097668.BYI23_C006010
PFAMsLactamase_B
Model size789
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.83e-85
EggNOG OGsCOG0491@1|root,COG0491@2|Bacteria,1NK1F@1224|Proteobacteria,2WETU@28216|Betaproteobacteria,1KHVQ@119060|Burkholderiaceae
DescriptionMetallo-beta-lactamase superfamily
Cds size789
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187017.84125-CDS-P-wetherbeei_contig8057:2115..29041683187017.84125-CDS-P-wetherbeei_contig8057:2115..2904Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8057 2116..2904 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8057.3.1prot_P-wetherbeei_contig8057.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8057 2116..2904 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8057.3.1

>prot_P-wetherbeei_contig8057.3.1 ID=prot_P-wetherbeei_contig8057.3.1|Name=mRNA_P-wetherbeei_contig8057.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
GRSWDAIEGERDWLEPHFLLPKDKGKQGVLQASLHTFLIRTPKHNILVDT
CVGNHKPRNSLPAWNMMNSDYLAKIAALGAKPEEIHYVMCTHLHFDHVGW
NTKLENGRWVPTFPNARYIFAKTEYEHWLNDKDGHAMDGSFEDSVLPVVE
AGRADLVKSDFAIDDTIWLEPTPGHTPGSVCINLSSGGGSAIFTGDAIHH
PIQIAYPEWSTAFCSDAAGSEASRRKIINKICDTDTYIMAAHFMDPTIAR
VVRNKDRWKLKV*
back to top

mRNA from alignment at P-wetherbeei_contig8057:2116..2904-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8057.3.1 ID=mRNA_P-wetherbeei_contig8057.3.1|Name=mRNA_P-wetherbeei_contig8057.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig8057:2116..2904- (Phaeothamnion wetherbeei SAG_119_79)
GGCCGTTCCTGGGACGCCATCGAGGGTGAGCGCGACTGGCTGGAGCCGCA CTTTCTGCTGCCCAAAGACAAGGGCAAGCAGGGCGTCCTTCAGGCCAGCC TGCACACATTTTTGATCCGCACCCCCAAACATAATATTCTGGTCGACACC TGTGTTGGCAATCACAAGCCGCGCAACAGTCTGCCCGCCTGGAACATGAT GAATTCGGATTATCTGGCGAAGATCGCGGCGCTGGGCGCGAAGCCCGAAG AAATCCATTATGTCATGTGCACCCATCTGCATTTTGATCATGTCGGCTGG AACACAAAGCTTGAAAATGGCCGCTGGGTTCCGACTTTTCCCAATGCGCG CTATATTTTCGCCAAAACGGAATATGAGCATTGGCTGAATGACAAGGACG GCCATGCCATGGACGGATCTTTTGAGGATAGCGTTCTGCCCGTGGTTGAG GCGGGCCGCGCCGATCTGGTGAAAAGCGATTTCGCCATTGACGACACGAT CTGGCTGGAACCCACGCCGGGCCACACGCCGGGGTCCGTGTGCATCAATC TGTCCAGCGGCGGCGGCAGCGCAATATTCACTGGCGACGCCATCCATCAT CCGATCCAGATCGCCTATCCGGAATGGAGCACGGCGTTCTGTTCCGACGC TGCTGGATCCGAAGCCTCACGCCGCAAAATCATCAACAAGATATGCGACA CCGACACCTATATCATGGCGGCGCATTTCATGGACCCCACCATCGCCCGC GTGGTGCGCAACAAGGACCGCTGGAAGCTGAAGGTATAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig8057:2116..2904-

>mRNA_P-wetherbeei_contig8057.3.1 ID=mRNA_P-wetherbeei_contig8057.3.1|Name=mRNA_P-wetherbeei_contig8057.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig8057:2116..2904- (Phaeothamnion wetherbeei SAG_119_79)
GGCCGTTCCTGGGACGCCATCGAGGGTGAGCGCGACTGGCTGGAGCCGCA
CTTTCTGCTGCCCAAAGACAAGGGCAAGCAGGGCGTCCTTCAGGCCAGCC
TGCACACATTTTTGATCCGCACCCCCAAACATAATATTCTGGTCGACACC
TGTGTTGGCAATCACAAGCCGCGCAACAGTCTGCCCGCCTGGAACATGAT
GAATTCGGATTATCTGGCGAAGATCGCGGCGCTGGGCGCGAAGCCCGAAG
AAATCCATTATGTCATGTGCACCCATCTGCATTTTGATCATGTCGGCTGG
AACACAAAGCTTGAAAATGGCCGCTGGGTTCCGACTTTTCCCAATGCGCG
CTATATTTTCGCCAAAACGGAATATGAGCATTGGCTGAATGACAAGGACG
GCCATGCCATGGACGGATCTTTTGAGGATAGCGTTCTGCCCGTGGTTGAG
GCGGGCCGCGCCGATCTGGTGAAAAGCGATTTCGCCATTGACGACACGAT
CTGGCTGGAACCCACGCCGGGCCACACGCCGGGGTCCGTGTGCATCAATC
TGTCCAGCGGCGGCGGCAGCGCAATATTCACTGGCGACGCCATCCATCAT
CCGATCCAGATCGCCTATCCGGAATGGAGCACGGCGTTCTGTTCCGACGC
TGCTGGATCCGAAGCCTCACGCCGCAAAATCATCAACAAGATATGCGACA
CCGACACCTATATCATGGCGGCGCATTTCATGGACCCCACCATCGCCCGC
GTGGTGCGCAACAAGGACCGCTGGAAGCTGAAGGTATAA
back to top