mRNA_P-wetherbeei_contig8055.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A835ZDT0_9STRA (Putative DEAD/DEAH box RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT0_9STRA) HSP 1 Score: 290 bits (741), Expect = 2.280e-92 Identity = 142/208 (68.27%), Postives = 171/208 (82.21%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGK-GVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFA 624
GF YQ+RSI+ QVRP+RQT+LFSATFKR++E+LA D+LTDPVRINVG +G +T+NED+RQVV V+P DA KWSWL L GFVA GKVL+FVSS+ GCEELC SIA + + V G+IHGDKDQ++RE LRAF+ ++ VLVGTDVASRGLDIKDVNTVV+YD AK+IETH+HR+GRTGRM K+GVHPG AYTL TPK + A
Sbjct: 178 GFGYQMRSIVDQVRPSRQTMLFSATFKRKVEQLARDVLTDPVRINVGHAGA----MTSNEDIRQVVHVLPSDAAKWSWLTSELPGFVANGKVLIFVSSRAGCEELCKSIAKDRRLQVEVGSIHGDKDQTDRETTLRAFRQGKINVLVGTDVASRGLDIKDVNTVVSYDMAKNIETHIHRIGRTGRMGKEGVHPGAAYTLFTPKHVSAA 381
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A7S3UTY6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTY6_HETAK) HSP 1 Score: 258 bits (658), Expect = 1.480e-79 Identity = 137/239 (57.32%), Postives = 170/239 (71.13%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVAGGVHRRGGSG 720
GFEYQ+RSI+ Q+RP RQTL+FSATFK++I+ LA DIL DPV+I VG G ANED+ Q++ V+ D A KW+WL R++ FV AGKVLVFVS+K EEL +I + GV A AIHGDKDQ R +++ +K +LQVLV TDVA+RGLD+K VNTVVN+DAAK+IETH+HRVGRTGRM DG GTA+TLV +A FA L R+L + Q IP EL +A RGG G
Sbjct: 189 GFEYQMRSIVDQIRPDRQTLMFSATFKKKIQILARDILRDPVKITVGLVG------QANEDIHQIITVMHDSAAKWNWLAQRMAEFVQAGKVLVFVSAKASTEELAANITRH-LGVRADAIHGDKDQHARSLIMQEYKKGKLQVLVATDVAARGLDVKGVNTVVNFDAAKNIETHIHRVGRTGRMGPDGRREGTAHTLVCQSEAHFAGQLCRNLRLSAQPIPEELEKLA----ARGGGG 416
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A2D4CJB4_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJB4_PYTIN) HSP 1 Score: 252 bits (644), Expect = 7.990e-76 Identity = 126/229 (55.02%), Postives = 161/229 (70.31%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFE Q+RSI+GQVRP RQTL+FSATF+RR+E LA D+L DPV++ VG G ANED+ Q V+P+D KW WL L A G++L+F SSK GCEEL ++ N +G A +HGDK+Q ER L F+ +LV TDVA+RGLDIKDV V+NYD AK+I+THVHR+GRTGRM DG PGTAYTLVT K + FAA L+ +++ + QE+P+EL T+A
Sbjct: 241 GFEPQLRSILGQVRPDRQTLMFSATFRRRVEALARDVLCDPVKVTVGVLG------QANEDITQRALVLPNDNAKWPWLMANLGRIAAEGRLLIFASSKVGCEELXKNV--NARGFVACCLHGDKNQQERNEALAQFRSGACGILVATDVAARGLDIKDVKNVINYDVAKNIDTHVHRIGRTGRMGTDGFEPGTAYTLVTMKXSQFAAQLVYNMDVSGQEVPAELLTLA 461
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: D0NN87_PHYIT (DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NN87_PHYIT) HSP 1 Score: 245 bits (625), Expect = 3.740e-74 Identity = 120/229 (52.40%), Postives = 157/229 (68.56%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFE Q+RS++GQVRP RQ L+FSATF+RRIE LA D+LT+PV++ VG G ANED+RQ+ V+P KW WL ++ V G++L+F SK GCEEL ++A A +HGDK Q ER L FKH +VLV TDVA+RGLD+KDV VVN+D AKSI+THVHR+GRTGRM +G PGTAYTLVT ++ FAA L+ +++ + Q + +EL +A
Sbjct: 225 GFEPQLRSVMGQVRPDRQILMFSATFRRRIETLALDVLTNPVKLTVGQIG------QANEDIRQIAVVLPGHGAKWPWLMSKIRSLVDEGRLLIFAGSKAGCEELAKNLAVAFPAAPALCLHGDKTQQERAEALTKFKHGACRVLVATDVAARGLDVKDVKNVVNFDVAKSIDTHVHRIGRTGRMGLEGFEPGTAYTLVTRNESQFAAQLVYNMDVSGQSVSAELLALA 447
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: K3WM87_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM87_GLOUD) HSP 1 Score: 246 bits (628), Expect = 5.640e-74 Identity = 123/229 (53.71%), Postives = 160/229 (69.87%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFE Q+RSI+GQ+RP RQTL+FSATF+RRIE LA DIL +PV++ +G G ANED+ Q+ VVP+D KW WL L G VA G+VL+F SK GCEEL ++ N + +HGDK Q ER L FK + +LV TDVASRGLDIKDV TVVN+D AK+I+ HVHR+GRTGRM DG PGTAYTLVTP+++ FA+ L+ +++ + Q + +L ++A
Sbjct: 261 GFEPQLRSIMGQIRPDRQTLMFSATFRRRIEALAFDILDNPVKVMIGKIG------QANEDIHQIAVVVPNDNAKWPWLMSNLKGIVADGRVLIFAGSKLGCEELTKNL--NAMQFPSWCLHGDKTQQERSEALSKFKSGECLILVATDVASRGLDIKDVKTVVNFDTAKNIDIHVHRIGRTGRMGLDGFEPGTAYTLVTPRESQFASQLVYNMDVSGQTVGPDLLSLA 481
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A1V9ZJM3_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJM3_9STRA) HSP 1 Score: 249 bits (636), Expect = 9.910e-74 Identity = 126/229 (55.02%), Postives = 165/229 (72.05%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFE Q+RSI+GQ+RP RQTLLFSATF+RRIE LA D+LT P +I VG G AN++++QV V+P+ A KW+WL +L V GK+LVFVSSK G +E+ ++ ++ T +IHGDK Q +R LR FK + +L+ TDVA+RGLDIKDV VVNYDAAKSI+THVHR+GRTGRM DGV PGTAYTL+TPK A FA L+ +++ +RQ + ++L +A
Sbjct: 292 GFEAQLRSILGQIRPDRQTLLFSATFRRRIEALARDVLTQPAKIIVGTVG------QANDEIKQVAVVLPNPAAKWNWLIRQLPALVGEGKLLVFVSSKAGVDEVAGNLNSHPIRYTCVSIHGDKSQYDRSDALRQFKTAACPILIATDVAARGLDIKDVRNVVNYDAAKSIDTHVHRIGRTGRMGVDGVAPGTAYTLLTPKDADFAGHLVNNMDLSRQAVGADLMNLA 514
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A225X173_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X173_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.820e-72 Identity = 121/229 (52.84%), Postives = 160/229 (69.87%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFE Q+RS++GQVRP RQTL+FSATF+RRIE LA D+LT+PV++ +G G ANED+RQ+ V+P KW WL R+ V G++L+F SK GCEEL ++A A +HGDK Q ER L FKH + +VLV TDVA+RGLD+KDV TVVN+D AK+I+THVHR+GRTGRM +G PGTAYTLVT ++ FAA L+ +++ + Q + +EL +A
Sbjct: 298 GFEAQLRSVMGQVRPDRQTLMFSATFRRRIESLALDVLTNPVKLIIGQVG------QANEDIRQIAVVLPGHGAKWPWLMSRMRSLVDEGRLLIFAGSKAGCEELAKNLATAFPAAPALCLHGDKTQQERAEALSKFKHGECRVLVATDVAARGLDVKDVKTVVNFDVAKNIDTHVHRIGRTGRMGLEGFEPGTAYTLVTRNESQFAAQLVYNMDVSGQSVSAELLALA 520
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A024UR44_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UR44_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.670e-71 Identity = 123/229 (53.71%), Postives = 156/229 (68.12%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFE Q+RSI+GQ+RP RQTLLFSATF+RRIE LA D+LT+PV+I VG G AN++++Q+ VVP KW+WL L GK+L+F+ SK G +EL S+ G ++HGDK Q +R LR FK + +LV TDVA+RGLDIKD+ VVNYD AK+I+THVHR+GRTGRM DGV PGTAYTLVTPK FA L+ +++ Q + SEL VA
Sbjct: 298 GFESQLRSILGQIRPDRQTLLFSATFRRRIETLARDVLTNPVKIIVGTVG------QANDEIKQMAVVVPTKEAKWNWLMKNLPMLTEEGKLLIFIGSKAGVDELAASLNGLGDVYPCVSLHGDKSQFDRADALRRFKSGKCPILVATDVAARGLDIKDIKNVVNYDVAKNIDTHVHRIGRTGRMGIDGVSPGTAYTLVTPKDQDFAGHLVNNMDFTNQPVSSELLAVA 520
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A8C1KWB8_CYPCA (RNA helicase n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1KWB8_CYPCA) HSP 1 Score: 237 bits (605), Expect = 2.760e-71 Identity = 125/229 (54.59%), Postives = 155/229 (67.69%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFEYQVRSI VRP RQTLLFSATF+++IE+LA DIL DP+R+ G G ANEDV Q+V V+ KW WL RL F +AG VL+FV+ K CEEL T++ N +G + G +HGD DQSER +V+ FK L VLV TDVA+RGLDI + TVVNYD A+ I+TH HR+GRTGR + GV AYTL+T K +FA DL+R+LE A Q + EL +A
Sbjct: 225 GFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIG------EANEDVTQIVEVLQTGQEKWGWLTRRLVEFTSAGSVLIFVTKKTNCEELATNL--NQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGV----AYTLLTTKDTSFAGDLVRNLEGANQSVSRELMDLA 441
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Match: A0A3M6VMH0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMH0_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.960e-71 Identity = 121/229 (52.84%), Postives = 159/229 (69.43%), Query Frame = 1
Query: 4 GFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSGGAGHQLTANEDVRQVVAVVPDDACKWSWLRDRLSGFVAAGKVLVFVSSKQGCEELCTSIAANGKGVTAGAIHGDKDQSERERVLRAFKHSQLQVLVGTDVASRGLDIKDVNTVVNYDAAKSIETHVHRVGRTGRMTKDGVHPGTAYTLVTPKQAAFAADLLRHLEAARQEIPSELRTVA 690
GFE Q+RSI+GQVRP RQTL+FSATF+RRIE LA D+LT+P+++ +G G ANED+RQ+ V+P KW WL R+ V G++L+F SK GCEEL ++A A +HGDK Q ER + L FK + +VLV TDVA+RGLD+KDV VVN+D AK+I+THVHR+GRTGRM +G PGTAYTLVT +A FAA L+ +++ + Q + SEL +A
Sbjct: 338 GFEPQLRSIMGQVRPDRQTLMFSATFRRRIESLALDVLTNPIKLTIGQIG------QANEDIRQIAVVLPGHGAKWPWLMARMRTLVDEGRLLIFAGSKAGCEELAKNLAVAFPAAPALCLHGDKTQQERTQALAKFKQGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGLEGFKPGTAYTLVTRNEAQFAAQLVYNMDVSGQTVSSELLALA 560 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8055.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8055.1.1 >prot_P-wetherbeei_contig8055.1.1 ID=prot_P-wetherbeei_contig8055.1.1|Name=mRNA_P-wetherbeei_contig8055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=341bp QGFEYQVRSIIGQVRPARQTLLFSATFKRRIERLAADILTDPVRINVGGSback to top mRNA from alignment at P-wetherbeei_contig8055:118..2114+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8055.1.1 ID=mRNA_P-wetherbeei_contig8055.1.1|Name=mRNA_P-wetherbeei_contig8055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1997bp|location=Sequence derived from alignment at P-wetherbeei_contig8055:118..2114+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8055:118..2114+ >mRNA_P-wetherbeei_contig8055.1.1 ID=mRNA_P-wetherbeei_contig8055.1.1|Name=mRNA_P-wetherbeei_contig8055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1023bp|location=Sequence derived from alignment at P-wetherbeei_contig8055:118..2114+ (Phaeothamnion wetherbeei SAG_119_79)back to top |