mRNA_P-wetherbeei_contig12932.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12932.1.1
Unique NamemRNA_P-wetherbeei_contig12932.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: A0A2E2BAD5_9GAMM (Cytochrome c oxidase subunit 2 n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E2BAD5_9GAMM)

HSP 1 Score: 317 bits (813), Expect = 2.180e-106
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTK 633
            +I   IGVVVFGA+ YS+F  RKS GAKAA WH STKVE+LWT+IPF ILI +AVPAT +LIMME+VSNADMTIKVTGYQWKW Y Y+ E ++F+STI  DSN+ RQ  S +DP +V +YL +VDN  VVP +KKIRFLTTAGDVIHAWWVPALGWKRDAIPGFI ESWA I+ PG  RGQCAELCGKDHGFMPIVV+A+   DY AW+ +
Sbjct:   49 WIVCAIGVVVFGAMFYSIFVHRKSRGAKAANWHHSTKVEVLWTVIPFAILIAVAVPATKSLIMMEDVSNADMTIKVTGYQWKWXYDYIGEDVSFYSTIXKDSNVTRQRGSKLDPFSVDHYLRDVDNXXVVPTNKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFIXESWALIQEPGVXRGQCAELCGKDHGFMPIVVEAVPEADYLAWIAE 259
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: UPI001CC1C054 (cytochrome c oxidase subunit II n=1 Tax=Marinicella sp. NBU2979 TaxID=2873263 RepID=UPI001CC1C054)

HSP 1 Score: 313 bits (802), Expect = 2.070e-103
Identity = 148/220 (67.27%), Postives = 177/220 (80.45%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNA-------DMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMK 639
            +IC+ IGVVVFGA++ S+FA RKS GA+A Q+  STK E++WTIIP +IL+ +A+PAT ALI MEN ++        D+TIKVTGYQWKW Y Y++EGI+F ST+A DSN+ARQ  SGIDP TV NYLL+VDN LV+P +  IRFL TA DVIHAWWVP  GWKRDAIPGFINE+W  +KTPGTYRGQCAELCGKDHGFMPIVV+ LS EDYAAW+ + K
Sbjct:   49 WICIVIGVVVFGAMIVSIFAHRKSKGAQAEQFTHSTKAEVIWTIIPILILVVIAIPATRALITMENPTDDAGKRMQFDLTIKVTGYQWKWKYDYMEEGISFLSTLAKDSNLARQKGSGIDPATVENYLLDVDNPLVIPANTNIRFLLTADDVIHAWWVPDFGWKRDAIPGFINEAWTNVKTPGTYRGQCAELCGKDHGFMPIVVEVLSQEDYAAWLAEQK 268
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: A0A351MCL7_9GAMM (Cytochrome c oxidase subunit 2 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MCL7_9GAMM)

HSP 1 Score: 311 bits (796), Expect = 1.220e-102
Identity = 142/214 (66.36%), Postives = 177/214 (82.71%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMKA 642
            ++C  IGVVVF  + +S+F  RKS GA+AA +HEST VE++WT++PF+IL+G+AVPAT ALI +E+ ++ADM+I +TGYQWKWHY+YL++ + FFS +  DSN AR L SG DP +V NYLLEVDN +V+PV KK+RFLTTA DVIHAWWVPALG+KRDAIPGF+NESWA ++ PG YRGQCAELCG+DHGFMPIVVDA   E YAAWV + KA
Sbjct:   47 WVCTIIGVVVFSVMFWSIFHHRKSRGAQAAHFHESTTVEVIWTLVPFLILVGLAVPATRALIHIEDAADADMSILITGYQWKWHYKYLEDDVEFFSKLDQDSNRARMLGSGEDPASVENYLLEVDNPVVIPVGKKVRFLTTANDVIHAWWVPALGFKRDAIPGFVNESWALVEEPGIYRGQCAELCGRDHGFMPIVVDARPPEAYAAWVAEFKA 260
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: A0A831W6Y1_9GAMM (Cytochrome c oxidase subunit 2 (Fragment) n=1 Tax=Methylothermaceae bacterium TaxID=2268196 RepID=A0A831W6Y1_9GAMM)

HSP 1 Score: 306 bits (784), Expect = 2.730e-102
Identity = 144/223 (64.57%), Postives = 178/223 (79.82%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMKAATQHAAADA 669
            ++CVGI VVVFG + YS+   RKS     A +HE+T +EI+WT+IP +ILIG+AVPAT ALI +E+ S A+MTIKVTGYQWKWHY+Y +EGI FFS++ + SN ARQL SGIDP+TVPNYLLEVDN LVVPV+ +IRFL TA DVIHAWWVPA GWK+DAIPGF+N +W EI+ PG YRGQC ELCG+DHG+MPIVV A++ ++Y  WV + K   +HAA  A
Sbjct:   49 WVCVGIAVVVFGVMFYSIINHRKSKHPVPATFHENTMLEIVWTVIPVLILIGLAVPATKALIKIEDTSGAEMTIKVTGYQWKWHYEYPEEGIKFFSSLDEASNRARQLGSGIDPETVPNYLLEVDNPLVVPVNTRIRFLITAADVIHAWWVPAFGWKKDAIPGFMNAAWVEIEEPGIYRGQCTELCGRDHGYMPIVVKAVTKDEYQTWVAQWK--QKHAAQQA 269
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: UPI001C550E80 (cytochrome c oxidase subunit II n=1 Tax=Marinicella rhabdoformis TaxID=2580566 RepID=UPI001C550E80)

HSP 1 Score: 308 bits (788), Expect = 2.650e-101
Identity = 147/220 (66.82%), Postives = 169/220 (76.82%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVS-------NADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMK 639
            +ICV IG++VFGA+LYS+ A RKS G    Q+  ST  EILWTIIP +IL  MA PAT ALI MEN +       N DMTIKVTGYQWKW Y Y+DEG  F ST+A DSN+ARQ  SGI P+TV NYLL+VD  LV+PVD  IRFL TA DVIHAWWVP  GWKRDA+PGF+NE+W  +K PGTYRGQCAELCGKDHGFMP+VV+A+S EDYAAWV + K
Sbjct:   49 WICVVIGIIVFGAMLYSIVAHRKSKGVTPEQFSHSTFAEILWTIIPIVILAAMAWPATKALIQMENPTDEAGKPMNMDMTIKVTGYQWKWRYDYMDEGFGFLSTLAKDSNIARQKDSGIKPETVDNYLLDVDKPLVIPVDTNIRFLLTADDVIHAWWVPDFGWKRDAVPGFVNEAWTNVKVPGTYRGQCAELCGKDHGFMPVVVEAVSKEDYAAWVAEQK 268
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: A0A2N1XVT0_9GAMM (Cytochrome c oxidase subunit 2 n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-3 TaxID=2013799 RepID=A0A2N1XVT0_9GAMM)

HSP 1 Score: 307 bits (787), Expect = 4.390e-101
Identity = 139/213 (65.26%), Postives = 172/213 (80.75%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMK 639
            +ICV IG+ VFG + YS++  RKS G  AAQ+HESTKVEI+WTIIP +IL+ MA+PAT  ++ M++V  ADM+IKVTG+QWKW Y YLD G++FFS++ + SN ARQL SGIDP++VP+YLL VD  LV+P  KKIRFL TA DVIH+WWVP LGWK+DAIPGFINE+W  ++ PGTYRGQC ELCGKDHGFMPIVV A+   DY+AWV + K
Sbjct:   49 WICVFIGIAVFGTMFYSIYHHRKSKGHVAAQFHESTKVEIIWTIIPTLILVSMAIPATKTMLKMDDVQEADMSIKVTGWQWKWEYDYLDSGVHFFSSLDEASNRARQLNSGIDPRSVPHYLLNVDKPLVIPTKKKIRFLFTAADVIHSWWVPDLGWKKDAIPGFINEAWTSVEKPGTYRGQCTELCGKDHGFMPIVVIAMDEPDYSAWVDEQK 261
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: UPI0003B6E829 (cytochrome c oxidase subunit II n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI0003B6E829)

HSP 1 Score: 306 bits (783), Expect = 1.180e-100
Identity = 136/213 (63.85%), Postives = 175/213 (82.16%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMK 639
            ++CVGIGVVVFG + YS+   RKS     A +HE+TK+EI+WT+IP +ILI +A+PAT ALI +E+ S +DMTIKVTGYQWKWHY+Y +EGI FFS++ ++SN ARQ+ SG+DP+ VPNYLL VD+ LVVP++KKIRF+ TA DV+HAWWVPA GWK+DAIPG+I  +WA I+ PG YRGQCAELCG+DHG+MPIVV A++ E+Y AWV + K
Sbjct:   50 WVCVGIGVVVFGVMFYSIINHRKSKNPVPASFHENTKLEIIWTVIPVLILISLAIPATKALIKIEDTSGSDMTIKVTGYQWKWHYEYPEEGIKFFSSLDEESNRARQMNSGMDPEKVPNYLLNVDHPLVVPINKKIRFMITAADVLHAWWVPAFGWKKDAIPGYITAAWATIEKPGLYRGQCAELCGRDHGYMPIVVKAVTQEEYDAWVAQWK 262
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: A0A250KY09_9GAMM (Cytochrome c oxidase subunit 2 n=3 Tax=Methylocaldum TaxID=73778 RepID=A0A250KY09_9GAMM)

HSP 1 Score: 305 bits (782), Expect = 1.510e-100
Identity = 141/223 (63.23%), Postives = 179/223 (80.27%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMKAATQHAAADA 669
            +ICV IGV V+G ++YS+   RKS G   AQ+HE+TK+EI+WT+IPF+IL+GMA+PAT  ++   + S ADMT+KVTGYQWKW Y+YLDEGI+FFST+   SN ARQL + I+P +VPNYLL+VDN LVVPV+KKIRFL T  DVIH+WWVPALGWK+D IPGF+ ++WA+I+ PGTYRGQCAELCG+DHGFMPIVV A + E+Y  WV + KA  +   A+A
Sbjct:   47 WICVVIGVGVYGLMIYSIMHHRKSKGVVPAQFHENTKLEIVWTVIPFLILLGMAIPATSVMVKAYDTSGADMTVKVTGYQWKWRYEYLDEGIDFFSTLDAKSNEARQLGASINPTSVPNYLLDVDNPLVVPVNKKIRFLFTGADVIHSWWVPALGWKKDTIPGFVTDAWAKIEKPGTYRGQCAELCGRDHGFMPIVVIAKTNEEYKQWVAEQKAKAEVVKAEA 269
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BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: A0A1G0JZZ5_9GAMM (Cytochrome c oxidase subunit 2 n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0JZZ5_9GAMM)

HSP 1 Score: 305 bits (782), Expect = 2.010e-100
Identity = 144/223 (64.57%), Postives = 174/223 (78.03%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMKAATQHAAADA 669
            +IC  I V+VF  + +S+F  RKS GA AAQ+H STK E++WTIIP +IL+GMA PAT AL+ ME+  +ADMT+K+TG+QWKWHY+Y+D G  FFS +A DSN AR L SG +P+ V NYLLEVD  LV+PV KK+RFL TA DVIHAWWVPALGWKRD+IPG+INESWA I  PGTYRGQCAELCGKDHGFMPIVV A+  ++Y AWV +   A   A+A A
Sbjct:   53 WICCAIAVLVFSVMFWSIFKHRKSQGAVAAQFHHSTKAELIWTIIPIIILVGMAFPATKALVKMESTGDADMTVKITGHQWKWHYEYVDAGFGFFSVLAADSNEARALGSGKNPEEVENYLLEVDRPLVLPVGKKVRFLMTANDVIHAWWVPALGWKRDSIPGYINESWARIDEPGTYRGQCAELCGKDHGFMPIVVKAVPEDEYYAWVEEALVAQVDASAGA 275
[Close]
BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Match: A0A346N7T0_9GAMM (Cytochrome c oxidase subunit 2 n=2 Tax=Solimonas sp. K1W22B-7 TaxID=2303331 RepID=A0A346N7T0_9GAMM)

HSP 1 Score: 305 bits (782), Expect = 6.170e-100
Identity = 149/232 (64.22%), Postives = 176/232 (75.86%), Query Frame = 1 
Query:    1 YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMILIGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIADDSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWWVPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDALSAEDYAAWVTKMKAATQHAAADAA--PAATVA 690
            +ICV IG VVFG + YS+   R+S G K A +HEST VEILWT  PF+ILIGMA+PA   LI ME+  N+DMT+KVTGYQWKW Y+YL E + FFST++ +SN ARQL SGIDP TVPNYL++VDN LV+PV KK+RFL TA DVIHAWWVP +  K+DAIPG+INE+WA+I TPGTYRG CAELCG+DHGFMPIVV AL   +Y  W+ K K     AA  AA  PA  VA
Sbjct:   52 WICVAIGAVVFGVMTYSIIHHRRSKGHKPADFHESTTVEILWTSAPFIILIGMAIPAAGTLIKMEDTRNSDMTVKVTGYQWKWEYEYLGEDVKFFSTLSAESNKARQLGSGIDPNTVPNYLVDVDNPLVLPVGKKVRFLVTANDVIHAWWVPEIAVKKDAIPGYINETWAKINTPGTYRGVCAELCGRDHGFMPIVVKALPEAEYKEWLAKQKGGDAAAAPAAAALPATVVA 283
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12932.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2BAD5_9GAMM2.180e-10671.09Cytochrome c oxidase subunit 2 n=3 Tax=Gammaproteo... [more]
UPI001CC1C0542.070e-10367.27cytochrome c oxidase subunit II n=1 Tax=Marinicell... [more]
A0A351MCL7_9GAMM1.220e-10266.36Cytochrome c oxidase subunit 2 n=1 Tax=Gammaproteo... [more]
A0A831W6Y1_9GAMM2.730e-10264.57Cytochrome c oxidase subunit 2 (Fragment) n=1 Tax=... [more]
UPI001C550E802.650e-10166.82cytochrome c oxidase subunit II n=1 Tax=Marinicell... [more]
A0A2N1XVT0_9GAMM4.390e-10165.26Cytochrome c oxidase subunit 2 n=1 Tax=Gammaproteo... [more]
UPI0003B6E8291.180e-10063.85cytochrome c oxidase subunit II n=1 Tax=Methylohal... [more]
A0A250KY09_9GAMM1.510e-10063.23Cytochrome c oxidase subunit 2 n=3 Tax=Methylocald... [more]
A0A1G0JZZ5_9GAMM2.010e-10064.57Cytochrome c oxidase subunit 2 n=1 Tax=Gammaproteo... [more]
A0A346N7T0_9GAMM6.170e-10064.22Cytochrome c oxidase subunit 2 n=2 Tax=Solimonas s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12932contigP-wetherbeei_contig12932:3..701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1283300.ATXB01000001_gene1078
PFAMsCOX2,COX2_TM,Cytochrome_CBB3
Model size699
Max annot lvl135618|Methylococcales
KEGG rclassRC00016
KEGG koko:K02275
KEGG TC3.D.4.2,3.D.4.4,3.D.4.6
KEGG ReactionR00081
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00155
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.49e-101
EggNOG OGsCOG1622@1|root,COG2010@1|root,COG1622@2|Bacteria,COG2010@2|Bacteria,1MWHZ@1224|Proteobacteria,1RP4H@1236|Gammaproteobacteria,1XECZ@135618|Methylococcales
EC1.9.3.1
DescriptionSubunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
Cds size699
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185967.0077775-CDS-P-wetherbeei_contig12932:2..7011683185967.0077775-CDS-P-wetherbeei_contig12932:2..701Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12932 3..701 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12932.1.1prot_P-wetherbeei_contig12932.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12932 3..701 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12932.1.1

>prot_P-wetherbeei_contig12932.1.1 ID=prot_P-wetherbeei_contig12932.1.1|Name=mRNA_P-wetherbeei_contig12932.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp
YICVGIGVVVFGAILYSVFAFRKSAGAKAAQWHESTKVEILWTIIPFMIL
IGMAVPATHALIMMENVSNADMTIKVTGYQWKWHYQYLDEGINFFSTIAD
DSNMARQLKSGIDPKTVPNYLLEVDNHLVVPVDKKIRFLTTAGDVIHAWW
VPALGWKRDAIPGFINESWAEIKTPGTYRGQCAELCGKDHGFMPIVVDAL
SAEDYAAWVTKMKAATQHAAADAAPAATVAQQ*
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mRNA from alignment at P-wetherbeei_contig12932:3..701+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12932.1.1 ID=mRNA_P-wetherbeei_contig12932.1.1|Name=mRNA_P-wetherbeei_contig12932.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig12932:3..701+ (Phaeothamnion wetherbeei SAG_119_79)
TACATCTGCGTCGGCATCGGCGTGGTCGTTTTTGGCGCCATCCTCTATTC
CGTGTTTGCCTTCCGCAAGTCGGCCGGCGCCAAGGCCGCGCAATGGCACG
AGAGCACCAAGGTCGAAATCCTGTGGACCATCATCCCGTTCATGATCTTG
ATTGGTATGGCCGTTCCTGCCACCCACGCCCTGATCATGATGGAGAACGT
GTCGAACGCCGACATGACCATCAAGGTCACCGGCTATCAGTGGAAATGGC
ACTATCAGTATCTGGACGAGGGCATCAATTTCTTCAGCACCATCGCCGAT
GACAGCAATATGGCCCGCCAACTGAAGTCCGGTATCGACCCCAAGACCGT
GCCGAACTATCTGCTTGAAGTCGACAACCATCTGGTCGTGCCGGTAGACA
AGAAGATCCGCTTCCTGACCACTGCTGGTGACGTCATCCATGCCTGGTGG
GTGCCGGCCCTCGGCTGGAAGCGCGATGCCATCCCGGGCTTCATCAATGA
ATCCTGGGCCGAAATTAAGACCCCGGGCACCTACCGTGGCCAGTGCGCGG
AACTGTGTGGCAAGGATCATGGCTTCATGCCCATCGTGGTCGACGCGTTG
TCAGCCGAAGACTACGCCGCGTGGGTGACCAAGATGAAAGCCGCTACCCA
ACACGCGGCCGCCGACGCCGCCCCGGCCGCCACCGTGGCGCAACAGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12932:3..701+

>mRNA_P-wetherbeei_contig12932.1.1 ID=mRNA_P-wetherbeei_contig12932.1.1|Name=mRNA_P-wetherbeei_contig12932.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig12932:3..701+ (Phaeothamnion wetherbeei SAG_119_79)
TACATCTGCGTCGGCATCGGCGTGGTCGTTTTTGGCGCCATCCTCTATTC
CGTGTTTGCCTTCCGCAAGTCGGCCGGCGCCAAGGCCGCGCAATGGCACG
AGAGCACCAAGGTCGAAATCCTGTGGACCATCATCCCGTTCATGATCTTG
ATTGGTATGGCCGTTCCTGCCACCCACGCCCTGATCATGATGGAGAACGT
GTCGAACGCCGACATGACCATCAAGGTCACCGGCTATCAGTGGAAATGGC
ACTATCAGTATCTGGACGAGGGCATCAATTTCTTCAGCACCATCGCCGAT
GACAGCAATATGGCCCGCCAACTGAAGTCCGGTATCGACCCCAAGACCGT
GCCGAACTATCTGCTTGAAGTCGACAACCATCTGGTCGTGCCGGTAGACA
AGAAGATCCGCTTCCTGACCACTGCTGGTGACGTCATCCATGCCTGGTGG
GTGCCGGCCCTCGGCTGGAAGCGCGATGCCATCCCGGGCTTCATCAATGA
ATCCTGGGCCGAAATTAAGACCCCGGGCACCTACCGTGGCCAGTGCGCGG
AACTGTGTGGCAAGGATCATGGCTTCATGCCCATCGTGGTCGACGCGTTG
TCAGCCGAAGACTACGCCGCGTGGGTGACCAAGATGAAAGCCGCTACCCA
ACACGCGGCCGCCGACGCCGCCCCGGCCGCCACCGTGGCGCAACAGTAA
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