mRNA_P-wetherbeei_contig8050.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI) HSP 1 Score: 328 bits (841), Expect = 1.150e-102 Identity = 178/286 (62.24%), Postives = 208/286 (72.73%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 858
GHFVRR+ RAGQADWTN+YVK LP+ W + KLREEF K GA+TSCK+Q++P G+ E + GFGFVNFEEHE AVKA+E N ++ +GE T L+ +RAQKK ER REL K++ +K+ERMN++QGVN+YVKNLDE VTEDA+REAFAPYGTITSARVM D+S QSKGFGFVCFSAPEEATKA+ EMN KML NKPIYVALAQR+EVRR QLEAQ++QRT GM PRG+P P GMYG MPY M A PGMP Q
Sbjct: 203 GHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQ-----GDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNN--------------NQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYG-MPYWMGAQPGMPQQ 468
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA) HSP 1 Score: 311 bits (798), Expect = 1.790e-96 Identity = 179/292 (61.30%), Postives = 202/292 (69.18%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKL-GEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYG-AMPYMMAAGPGMPGQRGGM 870
GHFVRRN+RAGQADWTN+YVKN+P W EEKLR EFAKFG I S K+Q + +S ++GFGF+NFE+HE A AV NG + G + ELF RAQK+ ERQREL KYE LKVERMN+YQGVNLYVKNLDE V E ALREAFA GTITS R+MKD A+ G SKGFGFVCFS+PEEATKAVQEMNN+M+A+KPIYVALAQRKEVRRAQLEAQY+Q+ G+ PRG G Q PGMYG MPYMM PGQ GGM
Sbjct: 224 GHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRE-----------------SSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKD---------------AVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRGPMGAMQ-PGMYGMGMPYMM------PGQPGGM 476
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA) HSP 1 Score: 286 bits (732), Expect = 5.100e-87 Identity = 163/289 (56.40%), Postives = 204/289 (70.59%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLG--EGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMP-YMMAAGPGMPGQ 858
GHFV+R +RA +DWTN+Y+KN+P +WSEEKL +EF KFG +TS K + +P E EG K A G+GFVN+ +HE AVKAVE NGLKL +GE+ E++A RAQKK ER+REL K+E LK ER+N+YQGVNLYVKNLD+ +T++ LRE F YGTITSARVM+DS+G S+GFGFVC+SAPEEATKAV E N K++ KP+Y+ALAQR+EVRRAQLEAQY++ G+ PRG+P + Q PGMYGAMP Y M G G+P Q
Sbjct: 180 GHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKM--DPVE----EGAPPPKVAG----GYGFVNYADHESAVKAVEAMNGLKLKHPDGEER-EMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDSNG----------------NSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIP-LGQ-PGMYGAMPMYAMPPGQGIPPQ 439
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: F0YJH2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJH2_AURAN) HSP 1 Score: 249 bits (637), Expect = 2.320e-73 Identity = 154/304 (50.66%), Postives = 189/304 (62.17%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGEGED-------MTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTS---------GMAPRGLPG-MPQG--PGMYGA-----MPYMMAAG 840
GHFVRR ER+GQ+DWTN+YVKN PA+W EE LR+ F FGAITSCK AA++ FG+VNFE H+ AV A++ NG+ G+ LF RAQKK+ER+REL K++ K+ER+ +YQGVNL+VKNLD+ + +D LRE FA YGTITSARVM++ PA G S+GFGFVCFS+PEEA KAV EMNNK++ KPI+VALAQRKEVRRAQLEAQ++QR + M P G+P PQG P GA MP M AAG
Sbjct: 173 GHFVRRTERSGQSDWTNLYVKNFPADWDEETLRKAFETFGAITSCKA----------------------AAAADGSAFGWVNFEAHDAAVAAMDALNGIAELPGQAGGAPTTLKAPLFVGRAQKKIERERELKAKFDAAKIERIKKYQGVNLFVKNLDDGLDDDQLRENFAEYGTITSARVMRE-------------PAT--GTSRGFGFVCFSSPEEAAKAVTEMNNKLVLGKPIFVALAQRKEVRRAQLEAQHAQRRTTAPYGAHPGAMGPAGVPPHAPQGLHPAHLGAPYGTAMPIMYAAG 439
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC) HSP 1 Score: 248 bits (632), Expect = 1.820e-72 Identity = 151/290 (52.07%), Postives = 187/290 (64.48%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGE--GEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQ-RTSGMAP-RGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 858
GHF +R +R ADWTN YVKN+P W + LR+EF FG+ITSC + A++EG +GFGFVNF+E E A KAVE N +G+ G D+ L+ +AQK+ ER+REL K+E LK+ER+N+YQGVNLYVKNLD+++ +D LREAF GTITS R+MKD SG S+GFGFVCF+ PEEATKAV +MN K+++ KPIYVALAQRKEVRRAQLEAQ++Q R SGM RG+P Q P MYGA P A MP Q
Sbjct: 193 GHFQKRQDRPDLADWTNCYVKNIPHNWDDATLRKEFEVFGSITSCVVMKD---------ASSEGN----------RGFGFVNFDEPESAQKAVEALNDKVVGQEDGADIA-LYVGKAQKRSERERELRNKFEALKMERINKYQGVNLYVKNLDDQLNDDELREAFTTCGTITSCRIMKDPSG----------------NSRGFGFVCFATPEEATKAVTDMNGKLVSGKPIYVALAQRKEVRRAQLEAQHAQQRASGMVVGRGMP--MQQPPMYGAAPMFYAQPNQMPPQ 444
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN) HSP 1 Score: 247 bits (630), Expect = 4.060e-72 Identity = 144/280 (51.43%), Postives = 186/280 (66.43%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNG--LKLGEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMPYMMA 834
GHF +R ER +WTN YVKN+P W+EE++R+EF FG + S + A + KGFGFVNFE+ EGA KAVE NG K +G D+ EL+ RAQK+ ER+REL K+E LK+ER+++YQGVNLYVKNLD+++T++ LREAF +GTITS+R+M+D++G S+GFGFVCFS PEEA KAV EMN K+++ KP+YVALAQRKEVRRAQLEAQ++QR +G+ RG+P M Q P MYGA P A
Sbjct: 189 GHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVMKD-------------------AGAEHHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDV-ELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRDTAG----------------VSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQR-AGLMGRGIP-MGQPP-MYGAAPMFYA 429
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A1E7FQC9_9STRA (Polyadenylate-binding protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQC9_9STRA) HSP 1 Score: 245 bits (625), Expect = 2.100e-71 Identity = 150/295 (50.85%), Postives = 192/295 (65.08%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLG---EGEDMT-ELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMPYMMAAGPGMPG--QRGG 867
GHF+ RN+R GQ D+TN YVKN+P +W +E+L +EFA+FG I S AA T+ + ++ GFGFVNF EHE A +VE NG +GE++ E+F RAQKK ER RE+ K+E K++R++++QGVNLYVKNL++ VT+D LR+ FA GTITSAR+MKD G+S+GFGFVCFS+PEEAT+AV EMN K++ANKPI+VALAQR+EVRRAQLEAQ++ R G G PGM +GP M G M Y PGMP QRGG
Sbjct: 175 GHFIGRNQRPGQDDFTNCYVKNIPLDWDDERLNKEFAQFGEIAS--------------AAETDDK------KIESLGFGFVNFVEHESAAASVEALNGKNYTHTIDGEEVEREMFVGRAQKKAERDREMRSKHEAEKMDRISKFQGVNLYVKNLEDVVTDDMLRDEFAAMGTITSARIMKDMG--------------KDGRSRGFGFVCFSSPEEATRAVNEMNGKLIANKPIFVALAQRREVRRAQLEAQHANRNVGPGGPGQPGMMRGP-MGGPMGY-----PGMPMYMQRGG 429
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A7S3LEE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE9_9STRA) HSP 1 Score: 242 bits (617), Expect = 2.610e-71 Identity = 154/316 (48.73%), Postives = 195/316 (61.71%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAK--GFGFVNFEEHEGAVKAVEHFNGLKLG---EGEDMTE-LFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQR----TSGM--APRG----LPGMPQ-------GPGMYGAMPYMMAAGPGMPGQRGGMTAQ 879
G F+RRN+R WTN YVKN+P EW++++L +EFA+FG I S + + E EGE AK S + + GFGFVNF EHE A AVE NG + +GE+ + L+ RAQKK ER+REL K+E K++R++++QGVNLYVKNLD+ VT+D LR+ F GTITSARVMKD G+S+GFGFVCFS PEEAT+AV EMN K+LA KP++VA+AQR++VRRAQLEAQ++ R GM AP G PG+P G GM A P MM P M G RGG Q
Sbjct: 199 GQFMRRNDRPDVNSWTNCYVKNIPLEWNDDRLNKEFAQFGEIVSATVAKGVKKNKKKEEPPAEGEEPAKEESEEPQSLGFGFVNFLEHEAAAAAVEQLNGKEYTTTVDGEETQQALYVGRAQKKAERERELRAKFEAEKMDRISKFQGVNLYVKNLDDSVTDDMLRDEFTSMGTITSARVMKD---------------VKDGRSRGFGFVCFSTPEEATRAVNEMNGKLLAGKPVFVAVAQRRDVRRAQLEAQHANRGPPGQMGMMRAPMGGPMQYPGVPMYMQRPGPGAGMQPAYPTMM---PQMMGGRGGAVPQ 496
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD) HSP 1 Score: 243 bits (620), Expect = 1.250e-70 Identity = 146/289 (50.52%), Postives = 185/289 (64.01%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNG--LKLGEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAP-RGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 858
GHF +R +R DWTN YVKN+P++WS+E L +EF FG + S + A + +GFGFVNFEE EGA KAVE NG + +G D+ EL+ +AQK+ ER+REL K+E LK+ER+N+YQGVNLYVKNLD+++ +D LREAFA GTITS+RVM+D +G S+GFGFVCFS PEEA KAV EMN K+++ KP+YVALAQRKEVRRAQLEAQ++ + +G+ RGLP M Q P MYGA P MP Q
Sbjct: 194 GHFQKRQDRPDIDDWTNCYVKNIPSQWSDEDLLKEFKPFGPVLSAVIMRD-------------------ADAELNRGFGFVNFEESEGAHKAVEALNGKVYQTADGSDL-ELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRDQNG----------------NSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLP-MGQPP-MYGAAPMFYTQPNQMPPQ 444
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.890e-70 Identity = 149/290 (51.38%), Postives = 187/290 (64.48%), Query Frame = 1
Query: 1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGEGEDMTE--LFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQ-RTSGMAP-RGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 858
GHF +R +R +WTN YVKN+P W + LR+EF FGAI+SC + A+S + +GFGFVNFEE E A +A E N K+ ED E L+ +AQK+ ER+REL K+E LK+ER+N+YQGVNLYVKNLD+++T++ LREAFAP GTITS R+M+D PA G S+GFGFVCF+ PEEATKAV EM+ K+++ KPIYVALAQRKEVRRAQLEAQ++Q R +GM RG+P Q P MYGA P A MP Q
Sbjct: 235 GHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVMKD-------------------ASSEQNRGFGFVNFEEPEAAREACEKLNN-KVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRD-------------PA---GNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMP--MQQPPMYGAAPMFYAQPNQMPPQ 486 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8050.1.1 >prot_P-wetherbeei_contig8050.1.1 ID=prot_P-wetherbeei_contig8050.1.1|Name=mRNA_P-wetherbeei_contig8050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=414bp GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSback to top mRNA from alignment at P-wetherbeei_contig8050:190..2909- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8050.1.1 ID=mRNA_P-wetherbeei_contig8050.1.1|Name=mRNA_P-wetherbeei_contig8050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2720bp|location=Sequence derived from alignment at P-wetherbeei_contig8050:190..2909- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8050:190..2909- >mRNA_P-wetherbeei_contig8050.1.1 ID=mRNA_P-wetherbeei_contig8050.1.1|Name=mRNA_P-wetherbeei_contig8050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1242bp|location=Sequence derived from alignment at P-wetherbeei_contig8050:190..2909- (Phaeothamnion wetherbeei SAG_119_79)back to top |