prot_P-wetherbeei_contig8044.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8044.1.2
Unique Nameprot_P-wetherbeei_contig8044.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length568
Homology
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: A0A7S2V2V8_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2V8_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.300e-92
Identity = 133/170 (78.24%), Postives = 150/170 (88.24%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMGWELVHMDDLVDQLLHDDIVCDIALPRLPKRAML 170
            MANRTDPLA +VHGTNPQNL+EKI R KIYG++YWKEHCFGL+AETL+DKA  L HVGG+YGGN KP++FLCL+LKMLQLQP+K+IV+E IKNEDYKY+R LGAFYLRLVGRP DIYQYLEPLYNDYRKLRVRK MGWEL HMD+ +D LL +D  CDIALP LPKR  L
Sbjct:    7 MANRTDPLARTVHGTNPQNLVEKILRMKIYGSIYWKEHCFGLSAETLIDKAMDLGHVGGTYGGNRKPSKFLCLILKMLQLQPEKEIVIELIKNEDYKYIRALGAFYLRLVGRPADIYQYLEPLYNDYRKLRVRKYMGWELTHMDEYIDMLLREDYSCDIALPHLPKRQAL 176          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: A0A836CM94_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM94_9STRA)

HSP 1 Score: 285 bits (728), Expect = 4.350e-89
Identity = 133/188 (70.74%), Postives = 160/188 (85.11%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMGWELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEEDW 188
            MAN TDP A SVHGTNPQ L+EKITR KIY + YWKEHCFGLTAE +V+KA  L +VGGSYGGN +P++FLCLVLKMLQLQP+KDIV+EFIKNE++KYVR+LGAFY+RLVGRP+DIYQYLEPLYNDYRK+RVR+ MGW + H+D+++D+LL  D   DIALP LPKR  LE+    L+PR+SVLE+ W
Sbjct:    1 MANTTDPFAISVHGTNPQYLVEKITRTKIYNSQYWKEHCFGLTAEGIVEKAVDLKYVGGSYGGNARPSKFLCLVLKMLQLQPEKDIVIEFIKNEEFKYVRVLGAFYMRLVGRPIDIYQYLEPLYNDYRKVRVRQTMGWAMKHVDEIIDELLRGDHSFDIALPHLPKRGALEET-GALKPRISVLEDAW 187          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: W7TQL1_9STRA (Pre-mRNA-splicing factor 38 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL1_9STRA)

HSP 1 Score: 280 bits (717), Expect = 5.090e-85
Identity = 134/187 (71.66%), Postives = 153/187 (81.82%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMGWELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEED 187
            MANRTDP   +VHGTNPQ LIEKI R KIY +LYWKEHCFGLTAETLVDKA  L   GG YGG  KPT+F+CLVLKMLQLQP+K+IVVEFIKNEDYKY+R+LGAFYLRLVG+PLDIYQYLEPLYNDYRKLR R   GW L HMD+ +++LL  D  CD+ALP LPKR +LED    L PR+S L+++
Sbjct:    1 MANRTDPTVTTVHGTNPQFLIEKILRQKIYNSLYWKEHCFGLTAETLVDKAVGLKAYGGQYGGMQKPTKFMCLVLKMLQLQPEKEIVVEFIKNEDYKYLRVLGAFYLRLVGKPLDIYQYLEPLYNDYRKLRFRGVAGWALKHMDEFIEELLTSDYCCDVALPHLPKRHLLEDQKL-LAPRISALDDE 186          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: I0YZI6_COCSC (Pre-mRNA-splicing factor 38 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZI6_COCSC)

HSP 1 Score: 271 bits (693), Expect = 2.780e-83
Identity = 129/198 (65.15%), Postives = 164/198 (82.83%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMG-WELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEEDWGGEAGAAEA 197
            MANRTDP A SVHGTNPQNL+EKI R KIY ++YWKEHCF LTAE+LVDKA  L +VGG++GG   PT+F+CL+LK+LQLQP+K+I+VEFIKNEDYKYVR+LGAFYLRLVGRPL++YQYLEPLYNDYRK+R+R A G + L HMD+++DQ+L+ + + D+A+PR+P R  +E     L PR+SVLE+D+  +   AEA
Sbjct:    1 MANRTDPDARSVHGTNPQNLVEKILRMKIYSSMYWKEHCFALTAESLVDKAVDLKYVGGTFGGQRAPTQFMCLMLKLLQLQPEKEIIVEFIKNEDYKYVRILGAFYLRLVGRPLEVYQYLEPLYNDYRKVRLRNADGNFALTHMDEIIDQMLYSEYLFDVAMPRIPNRVTMERLSL-LEPRISVLEDDFDEDMLEAEA 197          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: A0A7S2W3S8_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3S8_9STRA)

HSP 1 Score: 275 bits (703), Expect = 8.750e-83
Identity = 130/185 (70.27%), Postives = 158/185 (85.41%), Query Frame = 0
Query:    3 NRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMGWELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEED 187
            N TDPLAASVHGTNPQNL+EKITR KIY +L+WKE CFGLTAETLVD+A  L ++GG+YGGN+KP++FLCLVLKMLQLQP+K+I++EFIKNEDYKYVR+LGAFYLRLVG+P+DIY+YLE LY DYRK+RVR   GWE+V +D+ +D+LL  D  CDIALPRLPKR  LED    + PR++  E+D
Sbjct:    6 NTTDPLAASVHGTNPQNLVEKITRLKIYASLFWKEFCFGLTAETLVDRAMGLQYIGGTYGGNVKPSKFLCLVLKMLQLQPEKEIIIEFIKNEDYKYVRVLGAFYLRLVGKPVDIYKYLELLYADYRKIRVRTKQGWEIVRVDEFIDELLTSDYSCDIALPRLPKRWHLEDAGM-IPPRMNHAEDD 189          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: A0A061QUJ5_9CHLO (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUJ5_9CHLO)

HSP 1 Score: 269 bits (687), Expect = 1.560e-81
Identity = 131/189 (69.31%), Postives = 158/189 (83.60%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMG-WELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEEDW 188
            MANRTDP AA+VHGTNPQNL+EKI R KIY  LYWKEHCFGL+AE +VDKA  L  VGG++GG  K T F+CL+LKMLQ+QPDKDI++EFIKNEDYKYVR+LGA+YLRLVGRPL++YQYLEPLYNDYRK+RV  A G +EL H+D+LVDQ+L  D + DIALPRLP+R + E    +L PR SVL+E++
Sbjct:    1 MANRTDPSAAAVHGTNPQNLVEKILRMKIYSQLYWKEHCFGLSAEGVVDKAVELRCVGGTFGGTRKATNFMCLILKMLQIQPDKDIIIEFIKNEDYKYVRILGAYYLRLVGRPLEVYQYLEPLYNDYRKVRVMNASGAYELSHVDELVDQMLTTDYMFDIALPRLPERNVYESQ-GQLDPRQSVLDEEF 188          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: A0A7S1IJP8_9EUGL (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IJP8_9EUGL)

HSP 1 Score: 263 bits (672), Expect = 2.460e-81
Identity = 127/188 (67.55%), Postives = 155/188 (82.45%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMG-WELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEED 187
            MANRTDPLA SVHGTNPQ++IEKI R++IYG  YWKEHCFGLTAE++VDKA  L +  G+YGG  KP++FLCLVLK LQ+QPDK+I++EFIKNEDYKYVR+LGAFYLRLVGR LDIYQYLEPL NDYRK+R R   G +++ H+D+++  LL+ D +CD+ALP LPKR  LED    L  R+SVLE+D
Sbjct:   12 MANRTDPLARSVHGTNPQHMIEKIVRSRIYGCTYWKEHCFGLTAESIVDKAMDLDYYAGTYGGFRKPSKFLCLVLKCLQIQPDKEIIIEFIKNEDYKYVRVLGAFYLRLVGRALDIYQYLEPLLNDYRKIRERGLDGKYKITHVDEIIWDLLNKDTLCDVALPHLPKRTTLEDQQL-LSERISVLEDD 198          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: A0A1D1Z5H8_9ARAE (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z5H8_9ARAE)

HSP 1 Score: 265 bits (678), Expect = 4.910e-81
Identity = 130/189 (68.78%), Postives = 154/189 (81.48%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMG-WELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEEDW 188
            MANRTDP A S+HGTNPQNL+EKI R+KIY   YWKE CFGLTAETLVDKA  L H+GG++GGN KPT F+CLVLKMLQ+QP+KDIVVEFIKNEDYKYVR+LGAFY+RL G   D+YQYLEPLYNDYRKLR++ A G + L H+D+L+D+LL +D  CDIALPR+ +R  LE     L PR S LE+D+
Sbjct:    1 MANRTDPSAKSIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRKPTPFMCLVLKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYMRLTGTVTDVYQYLEPLYNDYRKLRLKSADGRFSLTHVDELIDELLTNDYSCDIALPRVQRRWTLEATGL-LEPRRSALEDDF 188          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: UPI0018ADD529 (pre-mRNA-splicing factor 38-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018ADD529)

HSP 1 Score: 266 bits (681), Expect = 9.780e-81
Identity = 130/189 (68.78%), Postives = 154/189 (81.48%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMG-WELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEEDW 188
            MANRTDPLA S+HGTNPQNL+EKI R+KIY   YWKE CFGLTAETLVDKA  L H+GG++GGN +PT F+CLV+KMLQ+QPDKDIVVEFIKNEDYKYVR+LGAFY+RL G   D+YQYLEPLYNDYRKLR + + G + L H+D+++D+LL  D  CDIALPR+ KR  LE     L PR SVL+ED+
Sbjct:    1 MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRRPTPFICLVMKMLQIQPDKDIVVEFIKNEDYKYVRILGAFYMRLTGTVTDVYQYLEPLYNDYRKLRRKTSDGSFSLTHVDEVIDELLTKDYSCDIALPRVQKRWTLETTGV-LEPRKSVLDEDF 188          
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Match: A0A1Y1HWA0_KLENI (Pre-mRNA-splicing factor 38 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWA0_KLENI)

HSP 1 Score: 268 bits (684), Expect = 1.310e-80
Identity = 133/199 (66.83%), Postives = 155/199 (77.89%), Query Frame = 0
Query:    1 MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDKATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVRLLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMG-WELVHMDDLVDQLLHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEEDWGGEAGAAEAE 198
            MANRTDP A ++HGTNPQNL+EKI R+KIY   YW+EHCFGLTAETLVDKA  L H GG++GGN K T FLCL LKMLQ+QP+K+IVVEFIKNEDYKYVR+LGAFYLRLVG+P D+YQYLEPLYNDYRKLR + A G + L H+D+ +D+LL  D  CDI LPRLPKR  LE     L PR+S LE+ +  E    E E
Sbjct:    1 MANRTDPRARNIHGTNPQNLVEKIVRSKIYSNTYWREHCFGLTAETLVDKAMELDHFGGTFGGNRKATPFLCLTLKMLQIQPEKEIVVEFIKNEDYKYVRILGAFYLRLVGKPTDVYQYLEPLYNDYRKLRQKTAEGKYILSHVDEFIDELLTRDSHCDITLPRLPKRYTLESA-GTLDPRISALEDHFEEEDDEEEGE 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8044.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V2V8_9STRA2.300e-9278.24Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fib... [more]
A0A836CM94_9STRA4.350e-8970.74Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Tri... [more]
W7TQL1_9STRA5.090e-8571.66Pre-mRNA-splicing factor 38 n=2 Tax=Monodopsidacea... [more]
I0YZI6_COCSC2.780e-8365.15Pre-mRNA-splicing factor 38 n=1 Tax=Coccomyxa sube... [more]
A0A7S2W3S8_9STRA8.750e-8370.27Pre-mRNA-splicing factor 38 n=1 Tax=Rhizochromulin... [more]
A0A061QUJ5_9CHLO1.560e-8169.31Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Tet... [more]
A0A7S1IJP8_9EUGL2.460e-8167.55Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Eut... [more]
A0A1D1Z5H8_9ARAE4.910e-8168.78Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Ant... [more]
UPI0018ADD5299.780e-8168.78pre-mRNA-splicing factor 38-like n=1 Tax=Dioscorea... [more]
A0A1Y1HWA0_KLENI1.310e-8066.83Pre-mRNA-splicing factor 38 n=1 Tax=Klebsormidium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005037Pre-mRNA-splicing factor 38PFAMPF03371PRP38coord: 11..172
e-value: 8.7E-58
score: 195.1
IPR005037Pre-mRNA-splicing factor 38PANTHERPTHR23142UNCHARACTERIZEDcoord: 1..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..568
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..327
NoneNo IPR availablePANTHERPTHR23142:SF1PRE-MRNA-SPLICING FACTOR 38Acoord: 1..514

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8044contigP-wetherbeei_contig8044:170..2542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8044.1.2mRNA_P-wetherbeei_contig8044.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8044 10..2542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8044.1.2 ID=prot_P-wetherbeei_contig8044.1.2|Name=mRNA_P-wetherbeei_contig8044.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=568bp
MANRTDPLAASVHGTNPQNLIEKITRAKIYGTLYWKEHCFGLTAETLVDK
ATLLTHVGGSYGGNMKPTRFLCLVLKMLQLQPDKDIVVEFIKNEDYKYVR
LLGAFYLRLVGRPLDIYQYLEPLYNDYRKLRVRKAMGWELVHMDDLVDQL
LHDDIVCDIALPRLPKRAMLEDPPYRLRPRVSVLEEDWGGEAGAAEAEAA
AAAAEAAEAAVMAAAEAEATGIAVDSERGGRWRDEDDGRRREEDDGDGGR
NGWNRGYDGEDNGRGGDRRRGRRDDSAEKEQGEVREHNRERGGGAQNGHR
SGKGGGDGGRKRPRSRSRSRSRSRSRSRSGSGGRDSLRRHHRGSPPRHGY
RDRDRDDDVRGRRRGDSRDGVRRRGGEYGGRHDSRERGRGGGSGGRRRAD
DSRDRGHHRGGGCSPSEDRSRRRSRRDSRDRRGSSPGSGRSRSRSPGRGG
GAGRNRRGYRDRSRDRSSDRSRDRSRDRSRSKDSGRGRNGKDRRRREDRS
RSASPVLSIKGRKDGGSERAAAAAPAAAENKSDAKRQKRSPKGLFKETAQ
AEPAAANGKGGGGGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005037PRP38