mRNA_P-wetherbeei_contig804.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig804.3.1
Unique NamemRNA_P-wetherbeei_contig804.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: D7G8K1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K1_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 5.450e-15
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 1 
Query:    1 DGVFRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDLLVALP 165
            +G FRLF SG +  P  +EV+ SYGRR NDNLLLDYGF+MLDNEWD  +++ +LP
Sbjct:  229 NGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDAAEVICSLP 283
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A6H5JC99_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC99_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.550e-14
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 1 
Query:    1 DGVFRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDLLVALP 165
            +G FRLF SG +  P  +EV+ SYGRR NDNLLLDYGF+MLDNEWD  ++   LP
Sbjct:  257 NGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDTAEVTCFLP 311
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A836CPE3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.890e-11
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:    1 DGVFRLFASGGD----ACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEV 144
            +GVFRL+ SGG     A P G E + SYGRR N +LLL+YGF+MLDNEWDEV
Sbjct:  209 NGVFRLWPSGGGSASVAVPRGCEALNSYGRRSNAHLLLEYGFAMLDNEWDEV 260
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A2D4CAI0_PYTIN (SET domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAI0_PYTIN)

HSP 1 Score: 64.3 bits (155), Expect = 4.070e-11
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 1 
Query:    1 DGVFRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWD 138
            +G+FRL+ S G+A   G EV  SYGRRPN  LLLDYGF++ DNEWD
Sbjct:  160 NGMFRLYPSAGNAYAQGMEVFNSYGRRPNFQLLLDYGFALTDNEWD 205
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A7S3Y0Q1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Q1_HETAK)

HSP 1 Score: 62.8 bits (151), Expect = 4.030e-10
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 DGVFRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDLLVAL 162
            +G+FRLF S  +  P G+EV  SYGRR N+NLL++YGF++  NEWD V + + L
Sbjct:   34 NGLFRLFPSNSNNYPAGSEVFNSYGRRTNENLLMEYGFALPKNEWDSVHIPIKL 87
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A8K1FF70_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF70_PYTOL)

HSP 1 Score: 62.8 bits (151), Expect = 4.070e-10
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 1 
Query:    1 DGVFRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDLLVALP 165
            +G FRLF S  ++   GAEV  SYGRRPN  LLLDYGF++ DNEW+ V+  V+LP
Sbjct:  215 NGSFRLFPSASNSYAKGAEVFNSYGRRPNFQLLLDYGFALEDNEWEYVE--VSLP 267
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A7S2WBA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBA3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 7.760e-10
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 1 
Query:   10 FRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEV 144
            FRLF S  +    G EV  SYGRRPNDNLLL+YGF+ML NEWD +
Sbjct:  296 FRLFPSSQNKYRAGEEVFNSYGRRPNDNLLLEYGFAMLGNEWDHM 340
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: K3X8I1_GLOUD (SET domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8I1_GLOUD)

HSP 1 Score: 61.6 bits (148), Expect = 9.270e-10
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:    1 DGVFRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDL 150
            +G+FRLF S  +    G EV  SYGRR N  LLLDYGF++L+NEWD VD+
Sbjct:  206 NGMFRLFPSSTNTYAAGTEVFNSYGRRSNFQLLLDYGFALLENEWDYVDI 255
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A6G0XSC9_9STRA (SET domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XSC9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.630e-6
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 1 
Query:   49 GAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDLLVAL 162
            G +V  SYGRRPN +LLLDYGF++  NEWD VD  ++L
Sbjct:  226 GDQVFNSYGRRPNQHLLLDYGFALPQNEWDYVDFDISL 263
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BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Match: A0A1V9ZS68_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS68_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 6.800e-6
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 1 
Query:   49 GAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDLLVAL 162
            G +V  SYGRRPN  LLLDYGF++ DN WD +DL ++L
Sbjct:  436 GDQVFNSYGRRPNHQLLLDYGFALPDNAWDYLDLDLSL 473
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig804.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G8K1_ECTSI5.450e-1561.82SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JC99_9PHAE3.550e-1461.82SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CPE3_9STRA1.890e-1163.46Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2D4CAI0_PYTIN4.070e-1163.04SET domain-containing protein n=1 Tax=Pythium insi... [more]
A0A7S3Y0Q1_HETAK4.030e-1051.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1FF70_PYTOL4.070e-1058.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2WBA3_9STRA7.760e-1064.44Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
K3X8I1_GLOUD9.270e-1058.00SET domain-containing protein n=1 Tax=Globisporang... [more]
A0A6G0XSC9_9STRA2.630e-660.53SET domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9ZS68_9STRA6.800e-660.53Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig804contigP-wetherbeei_contig804:8257..8421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G8K1
PFAMsRubis-subs-bind,SET
Model size165
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue8.94e-16
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
Ec32 ortholog descriptionSET domain and Rubisco LSMT substrate-binding domain protein
Ec32 orthologEc-14_003300.1
EC2.1.1.43
Descriptionpeptidyl-lysine monomethylation
Cds size165
COG categoryI
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187016.9645348-CDS-P-wetherbeei_contig804:8256..84211683187016.9645348-CDS-P-wetherbeei_contig804:8256..8421Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig804 8257..8421 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig804.3.1prot_P-wetherbeei_contig804.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig804 8257..8421 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig804.3.1

>prot_P-wetherbeei_contig804.3.1 ID=prot_P-wetherbeei_contig804.3.1|Name=mRNA_P-wetherbeei_contig804.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=55bp
DGVFRLFASGGDACPMGAEVIISYGRRPNDNLLLDYGFSMLDNEWDEVDL
LVALP
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mRNA from alignment at P-wetherbeei_contig804:8257..8421-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig804.3.1 ID=mRNA_P-wetherbeei_contig804.3.1|Name=mRNA_P-wetherbeei_contig804.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=165bp|location=Sequence derived from alignment at P-wetherbeei_contig804:8257..8421- (Phaeothamnion wetherbeei SAG_119_79)
GATGGTGTCTTCCGCCTCTTCGCCAGTGGCGGCGACGCTTGCCCGATGGG
CGCCGAGGTGATCATCTCGTACGGCCGCCGCCCCAACGACAACCTGCTGC
TGGACTACGGCTTCAGCATGCTCGACAACGAGTGGGACGAGGTCGACCTC
TTGGTGGCGCTGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig804:8257..8421-

>mRNA_P-wetherbeei_contig804.3.1 ID=mRNA_P-wetherbeei_contig804.3.1|Name=mRNA_P-wetherbeei_contig804.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=165bp|location=Sequence derived from alignment at P-wetherbeei_contig804:8257..8421- (Phaeothamnion wetherbeei SAG_119_79)
GATGGTGTCTTCCGCCTCTTCGCCAGTGGCGGCGACGCTTGCCCGATGGG
CGCCGAGGTGATCATCTCGTACGGCCGCCGCCCCAACGACAACCTGCTGC
TGGACTACGGCTTCAGCATGCTCGACAACGAGTGGGACGAGGTCGACCTC
TTGGTGGCGCTGCCG
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