mRNA_P-wetherbeei_contig8011.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8011.1.3
Unique NamemRNA_P-wetherbeei_contig8011.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: D7FVD3_ECTSI (Protein phosphatase 2A regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD3_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 3.780e-57
Identity = 124/244 (50.82%), Postives = 154/244 (63.11%), Query Frame = 1
Query:   46 IVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHSDDVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKD-DTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVARSLAATAAAAG 774
            IVEDDDE+LLALA  L   VP VGGP HA LLLP LENL+A+EETVVRD+ V S   VI   +G   +VA +V RLS GDWFTA+VSACG++ AAY+ I+E + R  LR QFD LAKD DTPMVRRA AS +G+FA  +E   ++++++PV                   F ALA DDQD+VR LA+E    +A +L    D          ++P +KRA EDRSWRVR  +AR  A  A A G
Sbjct:   55 IVEDDDEILLALAEALGQLVPAVGGPGHAALLLPSLENLAAMEETVVRDKAVESACMVIGLMQGGQQEVADMVTRLSTGDWFTAKVSACGLFTAAYKHISEHDQRALLRGQFDVLAKDTDTPMVRRAVASNVGNFAGVVEGHLLLSDVVPV-------------------FEALASDDQDNVRLLAVEQAGKVAKALV---DQQLEDECAPHIVPVIKRAVEDRSWRVRCAMARGFANAAHAVG 276          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: A0A6V1NCY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NCY8_HETAK)

HSP 1 Score: 186 bits (471), Expect = 4.220e-50
Identity = 122/270 (45.19%), Postives = 157/270 (58.15%), Query Frame = 1
Query:   52 EDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACE-GHSDDVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVARSLAATAAAAGAGGAT-ELAPALVGLLGDPETDVRAASI 855
            EDDDE+LL LA EL  FVPLVGGP +A  LL  LE L+ VEETVVRD+   S+ +V+       S++V G+VKRL+ GDWFTARVS+C +  A Y+ I + + + ++R  ++ALAKD+TPMVRRAAA KL DFA A+E   VV++L                              QDSVR LA++ T  +AT L  AG      AVV   LP V+ A EDRSWRVRH + +     + A G    T EL      L+ D E +VRAAS+
Sbjct:   55 EDDDEILLVLAEELGKFVPLVGGPEYAGALLEPLEKLAEVEETVVRDRATESICHVVEVLPPDQSEEVFGLVKRLAHGDWFTARVSSCSLMAATYKAIVDTDQKAEIRTLYEALAKDETPMVRRAAAGKLADFAEAVEVGVVVSDLXXXXX-------------------XXXXXXQDSVRVLAVQATTLIATQLQKAGMEQENLAVV---LPVVRHAVEDRSWRVRHAITKDFFEISEAMGQMVTTNELLQCFNNLIQDQEAEVRAASL 302          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: UPI001E1D5804 (serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5804)

HSP 1 Score: 184 bits (468), Expect = 1.460e-49
Identity = 114/239 (47.70%), Postives = 153/239 (64.02%), Query Frame = 1
Query:   43 EIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHSD---DVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQ---DSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVA 741
            + + D+DE+LLALA +L  F PLVGGP + H LLP LE+L+ VEETVVRD+ V SLRN IAA    SD       +VKRLSGGDWFT+R SACG++  AY+R++   ++ +LR+ F  L  DDTPMVRRAAA KLG+FA A+E D++ +EL+P                   +F  LA D+Q   DSVR LA+E   S+A+ L+          +   V+P +++AAED+SWRVR+ VA
Sbjct:   63 DTIYDEDEVLLALAEQLGQFTPLVGGPEYVHCLLPPLESLATVEETVVRDKAVDSLRN-IAAQHSPSDLENHFVPLVKRLSGGDWFTSRTSACGLFAVAYQRVSS-SVKAELRQHFRNLCGDDTPMVRRAAAGKLGEFAKAVEMDYLKSELIP-------------------LFINLAQDEQVGNDSVRLLAVEACVSIASLLSPED-------IELHVMPTLRQAAEDKSWRVRYMVA 273          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: A0A7R9BVA2_9CRUS (Hypothetical protein n=2 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BVA2_9CRUS)

HSP 1 Score: 180 bits (457), Expect = 7.240e-48
Identity = 122/288 (42.36%), Postives = 167/288 (57.99%), Query Frame = 1
Query:   43 EIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHSD---DVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVARSLAATAAAAGAG-GATELAPALVGLLGDPETDVRAASIAAAPAFADLLGAD 894
            E + D+DE+LLALA +L  F  +VGGP H   LLP LE+L++VEETVVRD+   SLR ++AA    +D       +++RLS GDWFT+R SACG++  AY R++   ++ +LR QF  L +DDTPMVRR AA KLG+FA A+E + + ++L+P+                   F  LA D+QDSVR LA++G  ++A  L   G+   TA  +   +P +K +AED+SWRVR  VA        A G     TEL      LL D E +VRAA+      F  LL  D
Sbjct:   60 ETIYDEDEVLLALAEQLGQFTAMVGGPDHVCCLLPPLESLASVEETVVRDKATESLR-LLAAQHSIADLENQFVPLIRRLSAGDWFTSRTSACGLFSVAYPRVST-SIKAELRGQFRQLCQDDTPMVRRGAACKLGEFAQAIEIEFLKSDLIPM-------------------FVNLASDEQDSVRLLAVDGCVAIARLLTKNGNPDDTAEYI---MPTLKASAEDKSWRVRFMVAEKFTDLQEAVGEELSKTELVGHFCALLKDVEAEVRAAAAHKVKDFCQLLPVD 323          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: A0A7R9A1Z0_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A1Z0_9CRUS)

HSP 1 Score: 179 bits (453), Expect = 3.400e-47
Identity = 125/289 (43.25%), Postives = 161/289 (55.71%), Query Frame = 1
Query:   43 EIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHSD---DVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVARSLAATAAAAGAG-GATELAPALVGLLGDPETDVRAASIAAAPAFADLLGADA 897
            + + D+DE+LLALA +L  F   VGGP H   LL  LE L+ VEETVVRD+ V SLR  +AA    +D       +VKRLS GDWFT+R SACG++  AY R++ P ++  LR  F  L +DDTPMVRRAA+SKLG+FA  +E + V  +L+P+                   F  LA DDQDSVR LA+E   S+A+ L  +     T      V+P +K  AED+SWRVR+ VA   +    A G      EL      LL D E +VRAA+ A    F   L  DA
Sbjct:   61 DTIYDEDEVLLALAEQLGSFTTFVGGPEHVSCLLTPLEALATVEETVVRDKAVDSLRT-LAAQHSTADLEQHFIPLVKRLSTGDWFTSRTSACGLFSVAYPRVSNP-IKADLRSHFRQLCQDDTPMVRRAASSKLGEFARVVELEFVKVDLIPM-------------------FVNLAQDDQDSVRLLAVEACVSIASLLTQSS----TEDTATHVMPTLKSCAEDKSWRVRYMVADKFSELQEAVGPELTKNELVTPFCSLLKDVEAEVRAAAAAKVRDFCQKLKEDA 324          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: F0WD27_9STRA (Serine/threonineprotein phosphatase 2A 65 kDa regulatory subunit A putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WD27_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.760e-47
Identity = 104/231 (45.02%), Postives = 141/231 (61.04%), Query Frame = 1
Query:   52 EDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHSDDVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVAR 744
            ++DDE+L+ALA E+ DFV LVGGPAHA +L+  LE L+ +EETVVRD+ V SL+ VI A     + +  ++KRL  GDWFT+RVSAC ++   Y R+ +   + Q+RE F     D+TPMVRRAAA+ +G  AA +E + VV                    L VQ+F AL  DDQDSVR LAIE   ++A  L+   +          +LP VK +AEDRSWRVR+ +A+
Sbjct:   57 DNDDEILVALADEVGDFVDLVGGPAHAAILVDPLEVLAGIEETVVRDRAVQSLQKVIKAVPNVGEVMVPLLKRLIEGDWFTSRVSACSLFAPTYSRLVDAGQKKQVRELFSVACNDETPMVRRAAATNIGKVAANVEQEFVVT-------------------LIVQLFKALTSDDQDSVRLLAIENCAAIAELLSPEENQQ-------HILPIVKTSAEDRSWRVRYSIAK 261          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: A0A0K0D3C6_ANGCA (Uncharacterized protein n=2 Tax=Strongylida TaxID=6308 RepID=A0A0K0D3C6_ANGCA)

HSP 1 Score: 169 bits (428), Expect = 1.180e-46
Identity = 106/241 (43.98%), Postives = 141/241 (58.51%), Query Frame = 1
Query:   43 EIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHSDDVAG-----VVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVARSL 750
            + + D+DE+LL LA +L +F PLVGGP + H LLP LENL+ VEETVVRD+ V SLR +    + HS          ++KRL+ GDWFT+R SACG++  AY R++ P ++ +LR  F  + +DDTPMVRRAAASKLGDFA   E D++V EL                     +F+ LA D+QDSVR LA+EG  ++A  L               V P +    +D+SWRVR  VA  L
Sbjct:   66 DTIYDEDEVLLILADQLGNFTPLVGGPDYVHCLLPPLENLATVEETVVRDKAVESLRKI---ADKHSSSALEEYFIPMLKRLATGDWFTSRTSACGLFSVAYPRVS-PAIKAELRNLFRQMCRDDTPMVRRAAASKLGDFAKVFERDYLVEELH-------------------SMFSDLAADEQDSVRLLAVEGCIAMAGLLPEDSRRE-------YVRPVLVGLMDDKSWRVRFMVAEKL 276          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: A0A183BLL1_GLOPA (Uncharacterized protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BLL1_GLOPA)

HSP 1 Score: 172 bits (437), Expect = 3.740e-46
Identity = 118/276 (42.75%), Postives = 157/276 (56.88%), Query Frame = 1
Query:   43 EIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHS-----DDVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVARSLAATAAAAGAG-GATELAPALVGLLGDPETDVRAAS 852
            + + D+DE+LLALA +L +F PLVGGP + H LLP LENL+ +EETVVRD+ V SL+ +    E HS     +    +V RLS GDWFT+R SACG++  AY R A P  + +LR  F +L +DDTPMVRRAAASKLGDFA   E D++  E+                   VQ+F  LA D+QDSVR L++E        + + G     +  +A V P V    +D+SWRVR+  A  +     A G   G  E+     GLL D E +VR A+
Sbjct:   63 DTIYDEDEVLLALAEQLGNFTPLVGGPEYVHCLLPPLENLANIEETVVRDKAVESLQKI---AEKHSAAQLEEYFIPMVLRLSAGDWFTSRTSACGLFSVAYAR-ANPAQKTELRAAFRSLCRDDTPMVRRAAASKLGDFAKVQEEDYLKNEI-------------------VQMFEDLAKDEQDSVRLLSVEA------GIVIVGLLCDDSTKLAHVKPIVVNLVQDKSWRVRYMSAVKIVEIQQAFGTKIGIEEIVAWYTGLLKDCEGEVRDAA 309          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: A0A812LRL6_9DINO (Ppp2r1a protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LRL6_9DINO)

HSP 1 Score: 175 bits (443), Expect = 4.170e-46
Identity = 111/237 (46.84%), Postives = 144/237 (60.76%), Query Frame = 1
Query:   40 AEIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHS--DDVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVAR 744
            AE VEDDDE+L+ +A +LA FV L+GG + A +L+  L +L+ VEETVVRD+ V S   ++           V  V++RL+ G+WFT+RVSA G++  AY R+A+P    +LR+ F AL  DDTPMVRRAAA  +G FA A   D  V ELLP                   +F  LAGDDQDSVR LAIE   + A +LA AGDA +T      VLP  K  AED+SWRVR+ +A+
Sbjct:   52 AEQVEDDDEVLMVMAEQLAGFVELMGGHSQAAVLVDILGSLATVEETVVRDKAVESTNTIVEGLPSADIVTHVLPVIERLASGEWFTSRVSAAGLFPTAYARLADPAAATKLRQHFKALCSDDTPMVRRAAAKHIGAFADAAH-DGSVGELLP-------------------LFTQLAGDDQDSVRLLAIENCTAFARNLA-AGDAQST------VLPLAKACAEDKSWRVRNNIAK 261          
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Match: A0A7R8WBA3_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WBA3_9CRUS)

HSP 1 Score: 175 bits (443), Expect = 5.240e-46
Identity = 120/275 (43.64%), Postives = 163/275 (59.27%), Query Frame = 1
Query:   43 EIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPCLENLSAVEETVVRDQTVVSLRNVIAACEGHSD---DVAGVVKRLSGGDWFTARVSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFAAAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLAIEGTPSLATSLAVAGDAAATAAVVAQV-LPAVKRAAEDRSWRVRHGVARSLAATAAAAGAG-GATELAPALVGLLGDPETDVRAAS 852
            E + D+DE+LLALA +L  F  LVGGP + H+LL  LE+L+ VEETVVRD+ V SLR+ +A     +D       ++KR++ GDWFT+R SACG++   Y R++ P ++ +LR  F  L +DDTPMVRRAAASKLG+FA  +E +HV  EL+P+                   F  LA D+QDSVR LA++    + + L+           VAQ+ LP +K+AAEDRSWRVR+ VA        A G     +EL      LL D E +VRAA+
Sbjct:   61 ESIYDEDEVLLALAEQLGQFTALVGGPEYVHVLLAPLESLATVEETVVRDKAVESLRH-LATLHSTTDLETYFVPLIKRIARGDWFTSRTSACGLFAVCYPRVS-PAIKTELRTLFKELCQDDTPMVRRAAASKLGEFAQVVEYEHVKDELIPM-------------------FTHLANDEQDSVRLLAVDACVMITSLLSQRSKDD-----VAQLTLPTLKQAAEDRSWRVRYMVADKFTELQKALGPELTESELVGPFCALLKDNEAEVRAAA 309          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8011.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVD3_ECTSI3.780e-5750.82Protein phosphatase 2A regulatory subunit n=2 Tax=... [more]
A0A6V1NCY8_HETAK4.220e-5045.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001E1D58041.460e-4947.70serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
A0A7R9BVA2_9CRUS7.240e-4842.36Hypothetical protein n=2 Tax=Notodromas monacha Ta... [more]
A0A7R9A1Z0_9CRUS3.400e-4743.25Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
F0WD27_9STRA7.760e-4745.02Serine/threonineprotein phosphatase 2A 65 kDa regu... [more]
A0A0K0D3C6_ANGCA1.180e-4643.98Uncharacterized protein n=2 Tax=Strongylida TaxID=... [more]
A0A183BLL1_GLOPA3.740e-4642.75Uncharacterized protein n=1 Tax=Globodera pallida ... [more]
A0A812LRL6_9DINO4.170e-4646.84Ppp2r1a protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
A0A7R8WBA3_9CRUS5.240e-4643.64Hypothetical protein n=1 Tax=Cyprideis torosa TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8011contigP-wetherbeei_contig8011:109..2531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FVD3
PFAMsHEAT
Model size1077
Max annot lvl2759|Eukaryota
KEGG koko:K03456
KEGG Pathwayko03015,ko04071,ko04111,ko04113,ko04114,ko04151,ko04152,ko04261,ko04350,ko04390,ko04391,ko04530,ko04728,ko04730,ko05142,ko05160,ko05165,map03015,map04071,map04111,map04113,map04114,map04151,map04152,map04261,map04350,map04390,map04391,map04530,map04728,map04730,map05142,map05160,map05165
Hectar predicted targeting categoryother localisation
Exons5
Evalue6.2e-58
EggNOG OGsKOG0211@1|root,KOG0211@2759|Eukaryota
Descriptionmeiotic spindle elongation
Cds size1077
COG categoryS
BRITEko00000,ko00001,ko01009,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187015.584525-CDS-P-wetherbeei_contig8011:108..2571683187015.584525-CDS-P-wetherbeei_contig8011:108..257Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8011 109..257 +
1683187015.5982478-CDS-P-wetherbeei_contig8011:751..9801683187015.5982478-CDS-P-wetherbeei_contig8011:751..980Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8011 752..980 +
1683187015.6065068-CDS-P-wetherbeei_contig8011:1248..14161683187015.6065068-CDS-P-wetherbeei_contig8011:1248..1416Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8011 1249..1416 +
1683187015.625467-CDS-P-wetherbeei_contig8011:1584..19771683187015.625467-CDS-P-wetherbeei_contig8011:1584..1977Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8011 1585..1977 +
1683187015.6373713-CDS-P-wetherbeei_contig8011:2393..25311683187015.6373713-CDS-P-wetherbeei_contig8011:2393..2531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8011 2394..2531 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8011.1.3prot_P-wetherbeei_contig8011.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8011 109..2531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8011.1.3

>prot_P-wetherbeei_contig8011.1.3 ID=prot_P-wetherbeei_contig8011.1.3|Name=mRNA_P-wetherbeei_contig8011.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=359bp
LVFSSFPLRQCLHAEIVEDDDELLLALAGELADFVPLVGGPAHAHLLLPC
LENLSAVEETVVRDQTVVSLRNVIAACEGHSDDVAGVVKRLSGGDWFTAR
VSACGVYGAAYRRIAEPELRGQLREQFDALAKDDTPMVRRAAASKLGDFA
AAMEADHVVAELLPVREAEASCFDVLVQLLFVQIFAALAGDDQDSVRQLA
IEGTPSLATSLAVAGDAAATAAVVAQVLPAVKRAAEDRSWRVRHGVARSL
AATAAAAGAGGATELAPALVGLLGDPETDVRAASIAAAPAFADLLGADAF
LRTVTPALQQLQQDSTLPVRNALSAAAMALTPKLGPDGMDQFVLPMLQTF
LRDDAPEVR
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mRNA from alignment at P-wetherbeei_contig8011:109..2531+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8011.1.3 ID=mRNA_P-wetherbeei_contig8011.1.3|Name=mRNA_P-wetherbeei_contig8011.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2423bp|location=Sequence derived from alignment at P-wetherbeei_contig8011:109..2531+ (Phaeothamnion wetherbeei SAG_119_79)
CTTGTGTTCTCTTCTTTTCCCCTGCGGCAATGTCTTCACGCAGAAATTGT TGAGGATGACGATGAACTTTTGCTGGCGCTGGCCGGGGAACTCGCCGACT TCGTGCCGCTCGTCGGAGGCCCCGCACACGCACACTTGCTGCTGCCCTGG TAAGTGTACAGTATATGAAAGGGCTGGTGTCCCGGCGACTCTTACTGCCT ACGGATTGCGGTGAAAAAGTATGTGGCATGACGCAAGTAGTTGAATTGAA AATCTTGCTCACCTCGTCGTATCGGTGGGCCTAGCGTCCTGTTTCCCGCG CCCTGCTTCTGGATTGCGCAAGCTTTCTATGTGTTACAGTTTGCATCGAG GAAAAGTGTCCTTGACGTATTTCTGACCCCATTTCTTCTTCATACTGCGG CATTGGCTGGCGGCCTGGCATGCGTTTGGCCGCTGAAACGGCAACAACTG ATCTCGTGATTATGCTGGTGGCGGGTGACGACGGTGGCGGCGGCGGCGAT GCGACTGCTGCAACTTCGGCGGCGTCGGCATTCCGGCGACTGGCAAACAA ATGAACGCGGCGGACGAAAAATCTGGCGGCGGCTCTCGGGAGCCATTCCC GCGGCGTTTCGGCGGCAACGTCTCTCACACTCCCGCGGGGCAGCCTGGAG AACCTCTCAGCCGTCGAGGAGACTGTGGTGCGGGACCAGACGGTGGTGTC GCTGCGAAACGTCATCGCAGCGTGCGAGGGGCACTCCGACGATGTCGCCG GTGTCGTGAAGCGGCTGAGTGGCGGCGACTGGTTCACTGCCCGCGTCAGT GCCTGCGGCGTCTACGGAGCGGCGTACCGGCGAATCGCCGAGCCGGAGCT CAGGGGCCAGCTGCGAGAACAGGTGAGGATGGTGTTTGGTTCGGTTTGCT GTGGGGTCTTAATGTTGATTTGGCGCGGCGGAATGGGGTCGTGGGGCTCC CGGAAATGCGACGATTGGGTTGCCGGAATGGAATTGGGGGACTGAAGAGT GTCTGCAAGCTGTTGCGGTCTCGGGCTCACCAGGGCTTGCCTTAGTTGGC GGTCGTCTTGCACCTGGCACAACGTCGTTGATCCAATTCTCTTGTTACTC AATTTGACGTTGTCGCCCCTTGATGGTCTGCTTTCTTCAGTTTGACGCCT TAGCCAAAGACGACACGCCGATGGTGCGGCGGGCGGCGGCGTCGAAGCTG GGAGACTTCGCGGCCGCGATGGAGGCGGATCACGTCGTCGCGGAGCTCTT GCCGGTGAGAGAGGCAGAAGCATCCTGCTTCGATGTGTTAGTGCAACTCC TTTTTGTTGTACAATTTGCTTCAGAGGTTGCCGCGTATGCATGCGGGAGG TATGGAAATGTCAAGTTGTGTTCTTTGCACCATCGCTGGTGTAGTGCACA CCAGCTCAGTGCATTTCATGTCTTCTCTAACCATACTATTCGCTTTGCTC TTTCGCCCTCTCCCTCCAAACACGAGCAGATTTTTGCTGCGCTCGCCGGA GACGACCAGGACAGCGTGCGACAGCTGGCGATTGAAGGCACGCCTTCCCT CGCCACCTCGCTGGCGGTAGCGGGCGACGCGGCGGCGACTGCGGCCGTGG TAGCACAAGTCCTGCCGGCTGTCAAGCGAGCAGCGGAGGACCGGAGCTGG AGAGTCCGGCATGGGGTCGCCCGAAGCCTGGCGGCGACGGCTGCGGCGGC GGGCGCCGGCGGGGCGACGGAGCTGGCGCCGGCACTGGTGGGTCTGCTCG GCGACCCTGAAACGGATGTCCGGGCGGCATCCATTGCAGCGGCGCCGGCG TTCGCGGACTTGCTCGGGGCGGACGCGTTCTTGCGAACTGTCACGCCGGC CCTGCAGCAGCTGCAACAGGTGGGTGTGTGGCTGTCCTTTCTTGTGCTTC TTTCGACGGTCAGATGCATTTTTTGTTGTGGCGCTGTCTTTGAGTCATAT TGGGGCTGCATCGGCTGGCAGTTCTTATGGTGCCGAGGAGGCACCGGTTG CTGGCAGAGTCTAAAACGTTAACCGTGCTACCTGAAACAGGGCCACTCGT TTCATGATTTTTGAGCTATGGTGTTGCGTTTTGTGAACCTGGTTGCCTTT GTTCAGTGTGATGGCGAACGCAACCGTACGGCAATCGATTTCCTGCGGCT AGGTGGTGCATTGCCATGAGGGGCCTGGCTTTTACGGCATGCGTGCCAAG GCTTTTCCATGCCTATGTGTAAACACGACCATGCCATCCAATCCGCCGCG GCTCTGTCGTTTCCTTCCTCCGCCGCCCTCGTTAGGATTCGACGCTGCCG GTGCGCAATGCTCTAAGCGCGGCAGCGATGGCGTTGACACCGAAGCTGGG GCCTGATGGCATGGACCAGTTTGTGCTGCCCATGCTGCAGACCTTCCTTA GAGACGACGCTCCTGAGGTGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8011:109..2531+

>mRNA_P-wetherbeei_contig8011.1.3 ID=mRNA_P-wetherbeei_contig8011.1.3|Name=mRNA_P-wetherbeei_contig8011.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig8011:109..2531+ (Phaeothamnion wetherbeei SAG_119_79)
CTTGTGTTCTCTTCTTTTCCCCTGCGGCAATGTCTTCACGCAGAAATTGT
TGAGGATGACGATGAACTTTTGCTGGCGCTGGCCGGGGAACTCGCCGACT
TCGTGCCGCTCGTCGGAGGCCCCGCACACGCACACTTGCTGCTGCCCTGC
CTGGAGAACCTCTCAGCCGTCGAGGAGACTGTGGTGCGGGACCAGACGGT
GGTGTCGCTGCGAAACGTCATCGCAGCGTGCGAGGGGCACTCCGACGATG
TCGCCGGTGTCGTGAAGCGGCTGAGTGGCGGCGACTGGTTCACTGCCCGC
GTCAGTGCCTGCGGCGTCTACGGAGCGGCGTACCGGCGAATCGCCGAGCC
GGAGCTCAGGGGCCAGCTGCGAGAACAGTTTGACGCCTTAGCCAAAGACG
ACACGCCGATGGTGCGGCGGGCGGCGGCGTCGAAGCTGGGAGACTTCGCG
GCCGCGATGGAGGCGGATCACGTCGTCGCGGAGCTCTTGCCGGTGAGAGA
GGCAGAAGCATCCTGCTTCGATGTGTTAGTGCAACTCCTTTTTGTTCAGA
TTTTTGCTGCGCTCGCCGGAGACGACCAGGACAGCGTGCGACAGCTGGCG
ATTGAAGGCACGCCTTCCCTCGCCACCTCGCTGGCGGTAGCGGGCGACGC
GGCGGCGACTGCGGCCGTGGTAGCACAAGTCCTGCCGGCTGTCAAGCGAG
CAGCGGAGGACCGGAGCTGGAGAGTCCGGCATGGGGTCGCCCGAAGCCTG
GCGGCGACGGCTGCGGCGGCGGGCGCCGGCGGGGCGACGGAGCTGGCGCC
GGCACTGGTGGGTCTGCTCGGCGACCCTGAAACGGATGTCCGGGCGGCAT
CCATTGCAGCGGCGCCGGCGTTCGCGGACTTGCTCGGGGCGGACGCGTTC
TTGCGAACTGTCACGCCGGCCCTGCAGCAGCTGCAACAGGATTCGACGCT
GCCGGTGCGCAATGCTCTAAGCGCGGCAGCGATGGCGTTGACACCGAAGC
TGGGGCCTGATGGCATGGACCAGTTTGTGCTGCCCATGCTGCAGACCTTC
CTTAGAGACGACGCTCCTGAGGTGAGG
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