mRNA_P-wetherbeei_contig801.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig801.1.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI) HSP 1 Score: 201 bits (511), Expect = 2.340e-48 Identity = 418/1433 (29.17%), Postives = 551/1433 (38.45%), Query Frame = 1
Query: 13 YFTWATEKAQEQLSVQSLRTGYIIESFVLVCDAAGWSPSSVGEAEANVLRDIVDCAKRFYPERLGAFLVVNAPPV--------------AAFALRALGLAPDGGGDGSDDASGGGTSGSGKGWKAPMAAAPAAKIRMVA------TSELLEIVPADQLPPELGGTGMPLPPPPVALWALEALTEPA-ADAAAGAAGVKPISASAGXXXXATPPTAATTAVPETEVAAMAQGSRPEDSKRSDGSGGGDASVG---------------------IVLTAERAIIMLAVLWTLVLFSAIVTQ-ALLAAAIA-----CLIGHIFLRRRARRPKL----------AAASTGGNSGRNGAGHAAALPSREAGSAGDGGVA---GXXXNGAAGRDRAAAAALDPRAERKG----SLHRAEARVTELRGSGSCGGFNICSIRVRRRTNRTGXXXXXXXXXXXXRSSPIDGAGKNGGGAALQWAEQRQVLEFVALRTALVERGL--LDGGXXXXXDVQKRLXXXXXXXXXXXXXXXXXLAGSTALDDRAWDLPPTLPLESLVEAFQTFLRHVLDSSDMCDLRETREFFGAAPLETVVV------------------LPLSCHAAARRSGVPLEAAAGLAXXXXXXXXXXXXXGGI------TVNGASSRVGAXXXXXXXXXXXXXSKVERGVEGPQR------------LPSVRPELRDMFLDAAHTHLFRLPVREENVWLARHLHPAGDRRPVSGHGSHDGGGGTSPLTNRSSRSSSRTSTPSPSKVARRFSPSRFGRGSGRNSGVGSSGASLXXXXXXXXXXXXXGTVSLAPTATLLP---LSRPTNFECPG--SGVSPSSAGSDVLGGPELTPRKRQLVSKLVGHVKDKVRRSSDKSMTWTPAAFPLLHVDVFAVPHDNPLCRIDGIAAVPGGKAAARVAALAATAADRHADGGGGGSVSSGRXXXXXXXVGGYGQFVLVVNVQVPRGXXXXXXXXXXXXXXYWGIPSHLLAPPADDDDGAPLDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVSLDALQQDLLRRFVDLP-----GSGDGGIE------CGGDG-------DTYDEDERESGILPDGDFRNASFQVVAGVIEGSPMAKKAVGEGVALHLPRKVTHRFFRGRRHFEIDIDVSSAVAAESTIGVLLSQPRLTVDFGVHLAGFRRLLGCARVRLPDLRAAEPFLLAPGEVLGLGGGGFGGFPAGPSSNGGASRGCGXXXXXXXXXXXXXXXXXAELVPLCRLELAGMFADSGPLPPFKMPGTGYLSGRRRVDVGPALGRLLRADLYRVDNCHDAMWRADHIVRRGRARDVIAKLLRDHPGCLGRGNGGGGADQVLWVVNLQTPGTPPLSLVCYFLVPLHEA---EGRAGAANAAAAELLRRYVDL 3924
YF W+ E+ E+++ L T +IIE +VCDA GW + ++ ++L+D YPERLG VVN P A RALGL AA A K+R++ ELL+ +P + LP E GGT LP PV L +P+ ADAA P+ AG AT P A AVP A S D G A+ G + AI +L +LW L S + + A+L A+A C+ G L RR L AAA+ G A SR + AG G VA G G +G PR G SL E V + G G G C +RV +++ R + + GA + +W R++ EFVALR +L+E G +GG D R W LPP +P L++ + +LR +L + E R F AP T LP +C A + XXXXXXXXXXX TV+ S + A XXXXXXXXXXXX +PS+RPEL+ MF D H R+P E N WL R + GA + T + P T+ +S ++ G +G S R+R+ + + V VK K S + + F LLHVDVF VP N L R+D I GG+A ARV L + GG+ +F+ VVN+Q+PR YWG+P+ L +PLD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++DLL R++DLP +G G + GG+ DEDE ESG+ PD DFRN S +VV V+EG +KAV +G A L RK+ R+FRG + E D++V S+VAAES +GV L++P +D G L G R+LGC RV L+ AEP LLAP V P P E + D+G F++ G GYLSG +V G G+L+RADLY+++ D M D+I GR+ V+ +L + Q L +VNLQ PG PPLS+V Y+ VP+ E AG A +L RR+VDL
Sbjct: 156 YFIWSVERVLERVASSMLSTQFIIEGSTVVCDARGWDQDNASDSVLSLLQDAAAIGLSRYPERLGQLFVVNVPAADRASGGSXXXXXXXLMLAARALGLG---------------------------AALEAGKLRVLPGELPKWAPELLKAIPPEHLPVEYGGTAPALPRWPV-------LPQPSTADAA-------PVGRPAG----ATSPLAGIRAVPGAPDPCSAGTGAKRGSGSPDRGNGNRATAGSGVLQPLLSLANGGARPGRTSYTIGGVDAIALLLILWALHRESPRLGETAMLGLAVALLARECVGGAATLPSANRRVPLLHDPRALVAAAAAAVG------------AAASRSSNVAGTGVVAEGEGFQGGGVSG----------PRDGDGGWEGVSLLGGEVEVVRVVGRGKSGFDRFC-VRVVEVASQS------------QRQAGVVGA--TAPTSRREWVAWRRLTEFVALRVSLMEAGCPAAEGGDR---------------------------------DTRMWQLPPAVPFGLLMQRLEAWLRRLLRDPEAVKREELRRFLLDAPRTTTAENXXXXXXXXXXXXXXXXSLP-ACQDPAIATNAXXXXXXXXXXXXXXXXXXXXSRRRTAPTVLSTVHEPLSPISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEARVIPSLRPELKTMFRDPGECHALRVPKHEHNQWLRRANRASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADVSGNGAGTSP-----TFPVTPPGTVTGARVVSPRGDYSANGKHAGTPSSXXXXXXXXXXXXXXRRREALKRFVSLVKRK--GGSKRGHRPYASGFKLLHVDVFQVPPGNHLHRVDHIVGRAGGRAQARVKDLTSQP-------------------------GGF-KFLFVVNLQLPRSFTKNTSAASVVL--YWGVPAECLGGAG----ASPLDFSRCTPPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-------FERDLLMRYIDLPFHRMGSNGSGFVSHEQAAVAGGERARGVPGFSADDEDESESGVFPDKDFRNMSLKVVTSVVEGRWTVRKAVDDGNAQVLSRKLNQRYFRGSLYMETDVEVGSSVAAESVVGVCLTEP-CVLDVGFFLEGGHRVLGCVRVSDLRLKVAEP-LLAPDSVA---------TPPPPPVR----------------------------------EFQDTWEDNGESHGFRVRGPGYLSGGGKVAAGTPFGKLVRADLYKMEAGIDRM---DNIGSVGRSAKVVRRLAKK--------------GQFLVIVNLQVPGNPPLSMVLYYAVPVPPGGVPEEGAGGKTTAFLDLFRRFVDL 1364
BLAST of mRNA_P-wetherbeei_contig801.1.1 vs. uniprot
Match: A0A835Z1B8_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B8_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.130e-35 Identity = 164/595 (27.56%), Postives = 228/595 (38.32%), Query Frame = 1
Query: 2389 LLHVDVFAVPHDNPLCRIDGIAAVPGGKAAARVAALAATAADRHADGGGGGSVSSGRXXXXXXXVGGYGQFVLVVNVQVPRGXXXXXXXXXXXXXXYWGIPSHLLAPPADDDDGAPLDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVSLDALQQDLLRRFVDLP------------------------------GSGDGGIECGGDGDTYDEDERESGILPDGDFRNASFQVVAGVIEGS-------------PMA-KKAVGEGVALHLPRKVTHRFFRGRRHFEIDIDVSSAVAAESTIGVLLSQPRLTVDFGVHLAGFRRLLGCARVRLPDLRAAEPFLL---APGEVLGLGGGGFGGFPAGPSSNGGASRGCGXXXXXXXXXXXXXXXXXAELVPLCRLELAGMFADSGPLPPFKMPGTGYLSGRRRVDVGPALGRLLRADLYRVD--------------------------------NCHDAMWRADHIVRRGRARDVIAKLLRDHPGCLGRGNGGGGADQVLWVVNLQTPGTPPLSLVCYFLVPLHEAEGRAGAANAAA---AELLRRYVDLP 3927
LLH DVF VP DN L R+D IA+ P +A ARV LAA +D QF+ ++N+QVP+ YWG+P ++ A G L L ++LL+R+VDLP G GG DE +SG+LPD DFRN+S ++ A + P A ++A+ + + H+ +K+T R+FRG ++ E D+D++SA A ST+ L +Q +T+D GVHL G RLLGCAR+ L+ AE L AP P PS G R V LAG+F DSG P + + G Y S RR+ PA+GRLL DL+RV+ +C D+I R+GR + +A L P D +L++VN+Q PGTPP+SLV Y+ VP+ A + A A LL R+V+LP
Sbjct: 844 LLHADVFEVPEDNDLHRLDHIASEPRSRAQARVKQLAAAKSDDP-------------------------QFLFILNLQVPK---VPGARGALSVVLYWGLPLEVMRV-------ATAAGGGAWDPEYEQL-----------------------------------LTPLHRELLQRYVDLPEXXXXXXXXXCAHASQEXXXXXXXXXXXXXXQGIGG------------DEADSGMLPDKDFRNSSLRLSAAAVPAQXXXXXXXXXXXXLPAALRRALDDAQSAHVAKKLTVRYFRGPQYMETDLDIASAGTA-STVAALCAQSAVTLDVGVHLEGAGRLLGCARLGATLLQRAELLPLPASAPPPS-----------PIAPSGGGSGHR---------------------RFVASTTDALAGVFTDSGAAPVYHLRGLRYASDRRKEAASPAVGRLLAVDLFRVEGPLGRAVXXXXXXXXXXXXXXXXXXXXXVCARSCSVDKKPVDNIARQGRCCERLAALAPTLP-----------PDHILFMVNIQMPGTPPISLVAYWSVPVGPPASGAPDPDGARRKFAHLLARFVELP 1312
BLAST of mRNA_P-wetherbeei_contig801.1.1 vs. uniprot
Match: A0A6H5JPN1_9PHAE (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN1_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.060e-16 Identity = 91/303 (30.03%), Postives = 124/303 (40.92%), Query Frame = 1
Query: 2884 LDALQQDLLRRFVDLP-----GSGDGGIE------CGGDG-------DTYDEDERESGILPDGDFRNASFQVVAGVIEGSPMAKKAVGEGVALHLPRKVTHRFFRGRRHFEIDIDVSSAVAAESTIGVLLSQPRLTVDFGVHLAGFRRLLGCARVRLPDLRAAEPFLLAPGEVLGLGGGGFGGFPAGPS--------------------------------SNGGASRGCGXXXXXXXXXXXXXXXXXAELVPLCRLELAGMFADSGPLPPFKMPGTGYLSGRRRVDVGPALGRLLRADLYRV 3642
L +++DLL R++DLP +G G + GG G DEDE ESG+ D DFRN S +V L RK+ R+FRG + E D++V S+VAAES +GV L++P +D G L G R+LGC RV L+ AEP LLAP V A P + GGA+ E +PL + + D+G F++ G GYL G +V G G+L+RADLY+
Sbjct: 949 LAVVERDLLMRYIDLPFHRMGSNGSGFVSHEQAAVAGGRGARGIPGFSADDEDESESGVFSDKDFRNMSLKV----------------------LSRKLNQRYFRGSLYMETDVEVGSSVAAESVVGVCLTEP-CVLDVGFFLEGGHRVLGCVRVNDFRLKVAEP-LLAPDSV------------ATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGGAA-------VASARDGGLPSANTHETLPLGNPQFQDTWEDNGESHRFRVRGPGYLYGGGKVTAGAPFGKLVRADLYKA 1208
BLAST of mRNA_P-wetherbeei_contig801.1.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.120e-6 Identity = 44/124 (35.48%), Postives = 60/124 (48.39%), Query Frame = 1
Query: 3559 GTGYLSGRRRVDVGPALGRLLRADLYRVDNCHDAMWRADHIVRRGRARDVIAKLLRDHPGCLGRGNGGGGADQVLWVVNLQTPGTPPLSLVCYFLVPLHEAEGRAGAANAAAAELLRRYV-DLP 3927
G YL + +V PA RLL YRVD R DHI RGRA+ +I + + P L++VN+Q PG PPLS+V YFL+P A+ A +L ++Y D+P
Sbjct: 240 GAFYLEDKAKVK-SPATCRLLHFANYRVDTDRFPSERIDHIASRGRAKALIDEWVSLDPQ----------RPPFLYIVNIQLPGKPPLSMVMYFLLPTDLAQQDPSADTQKFLDLFQKYYEDIP 352
BLAST of mRNA_P-wetherbeei_contig801.1.1 vs. uniprot
Match: A0A7S3HMX7_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMX7_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.810e-5 Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 1
Query: 13 YFTWATEKAQEQLSVQSLRTGYIIESFVLVCDAAGWSPSSVGEAEANVLRDIVDCAKRFYPERLGAFLVVNAPPVAAFALRAL 261
+ W TE+A + S ++GY IE+FV+V DA+GW+ ++ + YPERLG +++NAP + +FA R +
Sbjct: 137 FHAWETEQALRSMYSLSRKSGYNIETFVIVIDASGWNLKLATSDAFAFIKGMAVTDSDHYPERLGTLVLINAPSMLSFAWRVI 219
BLAST of mRNA_P-wetherbeei_contig801.1.1 vs. uniprot
Match: A0A482SYZ6_9ARCH (CRAL-TRIO domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYZ6_9ARCH) HSP 1 Score: 58.5 bits (140), Expect = 4.120e-5 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 1
Query: 13 YFTWATEKAQEQLSVQSLRTGYIIESFVLVCDAAGWSPSSVGEAEANVLRDIVDCAKRFYPERLGAFLVVNAPPVAAFALRAL 261
+ W TE+A + S +GY IE+FVLV DAAGW ++++ YPERLG L++NAP V + A + +
Sbjct: 154 FHAWETEQALRGMYKGSQESGYNIETFVLVIDAAGWGLRLATSDAYAFIKNMATTDSDHYPERLGNMLIINAPTVLSVAWKVV 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig801.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig801.1.1 >prot_P-wetherbeei_contig801.1.1 ID=prot_P-wetherbeei_contig801.1.1|Name=mRNA_P-wetherbeei_contig801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1326bp LWRTYFTWATEKAQEQLSVQSLRTGYIIESFVLVCDAAGWSPSSVGEAEAback to top mRNA from alignment at P-wetherbeei_contig801:2..4733- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig801.1.1 ID=mRNA_P-wetherbeei_contig801.1.1|Name=mRNA_P-wetherbeei_contig801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4732bp|location=Sequence derived from alignment at P-wetherbeei_contig801:2..4733- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig801:2..4733- >mRNA_P-wetherbeei_contig801.1.1 ID=mRNA_P-wetherbeei_contig801.1.1|Name=mRNA_P-wetherbeei_contig801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3978bp|location=Sequence derived from alignment at P-wetherbeei_contig801:2..4733- (Phaeothamnion wetherbeei SAG_119_79)back to top |