mRNA_P-wetherbeei_contig8004.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8004.1.1
Unique NamemRNA_P-wetherbeei_contig8004.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A7S2XXI7_9STRA (DNA replication licensing factor MCM4 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXI7_9STRA)

HSP 1 Score: 256 bits (655), Expect = 2.780e-81
Identity = 138/231 (59.74%), Postives = 174/231 (75.32%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGGRGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAPVAANNLAQAVRLLADDGLLHFNERTQTAVVR 693
            +L PTLLSRFDLIYLVLDRPN D DRRLARH+V LY   P+ P   ++Q+LLRD+IAYAR+   P + + AV  L+ GYL MRR+GG+G+KTI ATPRQLESLIR+SEALA+MR +  V   DV EAVRLMRVATQ AATDPRTGTIDMDMI TGR  VDR+ ++ L  EV+ LL G   GA++S+ +L+RR+A Q+D  +  N L +A++ LADD  + +++R QT  VR
Sbjct:  144 KLMPTLLSRFDLIYLVLDRPNPDSDRRLARHLVSLYYPDPDDPEVGVDQALLRDYIAYARQTCMPHIGDGAVSALLDGYLAMRRVGGQGSKTIAATPRQLESLIRISEALAKMRLASEVLESDVEEAVRLMRVATQAAATDPRTGTIDMDMITTGRATVDRDLMQQLANEVKQLLQGQR-GAKLSLSELKRRLATQTDEDIQQNLLVEALKQLADDNFIQYSDRHQTVTVR 373          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A7S4R0L5_9STRA (DNA replication licensing factor MCM4 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R0L5_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.660e-78
Identity = 134/236 (56.78%), Postives = 172/236 (72.88%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMG----GRGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAPVAANNLAQAVRLLADDGLLHFNERTQTAVVRA 696
            +LPPTLLSRFDLIYL+LD PN + DR+LA+H+VGLY + P    PP++ +LLRD+IAYAR  +HP L++ A  +L+  YLDMRRMG    G G +TI+ATPRQLESLIRLSE LARMR+SR V   DV EA+RLMRVATQ AATDPRTG IDMDMI TGR + +RE   +L   ++ LLA    G R+++ D+RR++ E ++A      + +A+R +  DGL+ FNER QT  VRA
Sbjct:  177 KLPPTLLSRFDLIYLILDAPNVENDRKLAQHLVGLYYETPNIVEPPLDHALLRDYIAYAREFIHPELSDLATRELIAAYLDMRRMGSGSGGGGQRTISATPRQLESLIRLSEGLARMRYSRVVARNDVKEAMRLMRVATQAAATDPRTGRIDMDMITTGRSSAERENEESLNTTLKELLAERR-GNRMAVSDVRRQLNEVTNANAQQEEVVEALRRMEADGLIQFNERAQTIFVRA 411          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: D7FQ67_ECTSI (MCM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ67_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 3.020e-76
Identity = 132/199 (66.33%), Postives = 158/199 (79.40%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGGRGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDA 597
            +LPPTLLSRFDLIYL+LD+PN   DR+LARH+V LY + P  P+ P+ Q  L D+IAYARRH+ P ++EPAV  L++GYL MR M GRGTKTI+ATPRQLESLIRLSE LA+MR +R+VE  DV EAVRLMRVATQ AATDPRTGTIDMDMI TG+GA DR+ V AL  E++ALL G   G R  +G+LR++M  QSDA
Sbjct:  827 KLPPTLLSRFDLIYLILDKPNAAMDRQLARHLVSLYYKVPVVPSSPLEQDFLMDYIAYARRHIQPEISEPAVRSLIKGYLGMRNMVGRGTKTISATPRQLESLIRLSEGLAKMRHARFVEDSDVAEAVRLMRVATQNAATDPRTGTIDMDMIATGQGASDRDAVDALSAEIKALLTGPLKGKRTGVGELRKKMEAQSDA 1025          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: B8C649_THAPS (DNA replication licensing factor MCM4 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C649_THAPS)

HSP 1 Score: 241 bits (616), Expect = 1.290e-72
Identity = 131/237 (55.27%), Postives = 172/237 (72.57%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRR-----MGGRGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAPVAANNLAQAVRLLADDGLLHFNERTQTAVVRA 696
            +LPPTLLSRFDLIYL+LD PN   DR+LA+H+VGLY + P+   PP++ SLLRD+IAYAR ++HP L++ A  +L+  Y+DMRR      GGRG +TI+ATPRQLESLIRLSE++ARMR+SR V   DV EAVRLM+VATQ AATDPRTG IDMDMI TGR   +RE    LG  ++ LL     G R+S+  +R +++E  +  V  ++L + ++++  DGL+ FNER QT  VRA
Sbjct:  396 QLPPTLLSRFDLIYLILDAPNVTNDRQLAQHLVGLYYETPDVVQPPLDHSLLRDYIAYARENIHPELSDLASRELIAAYIDMRRGGSGGSGGRG-RTISATPRQLESLIRLSESMARMRYSRVVTRSDVREAVRLMKVATQAAATDPRTGRIDMDMITTGRSTAERELEENLGASLKELLVERR-GNRLSVSQIRNQLSEILNVTVQQDDLIEILKVMEADGLVQFNERAQTVFVRA 630          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A7S4IIL2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IIL2_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.630e-72
Identity = 131/244 (53.69%), Postives = 172/244 (70.49%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGG-----------RGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDA-PVAANNLAQAVRLLADDGLLHFNERTQTAVVRA 696
            +LPPTLLSRFDLIYL+LD P+ + DRRLA+H+VGLY + P+   PP++  LLRD+++YAR  +HP L++ A  +L+  YLDMRRMG             G +TI+ATPRQLESL+RLSE+LARMR+SR V   DV EAVRLMRVATQ AATDPRTG IDMDMI TGR   +RE    L   ++ LL G   G R+++ D+++++AE  +   V  ++LA+A+R +  DG + FNER QT  VRA
Sbjct:  275 KLPPTLLSRFDLIYLILDNPDVESDRRLAKHLVGLYYETPDVVEPPLDHDLLRDYVSYARDRIHPELSDLASRELIAAYLDMRRMGSGSSGGAPGAPSSGNRTISATPRQLESLVRLSESLARMRYSRVVSRDDVREAVRLMRVATQAAATDPRTGRIDMDMIATGRSKREREEGETLRVHLKELL-GERRGKRMAVADIKKQLAEVGNLRDVGNDDLAEALRGMEGDGAVQFNERAQTVFVRA 517          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A7S0Y7K6_9STRA (DNA replication licensing factor MCM4 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7K6_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.760e-71
Identity = 124/236 (52.54%), Postives = 169/236 (71.61%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRR-----MGGRGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAPVAANNLAQAVRLLADDGLLHFNERTQTAVVR 693
            +LPPTLLSRFDLIYL+LD PN D DR+LA+H+VGLY +KP    PP++  LL+D+I YAR ++ PRL++ A  +L+  YL++R      +G  GT+TI+ATPRQLESLIR SEALA+M++S  V   D  EAVRL++VATQ AATDPRTG IDMDMINTGR  V+RE    L   ++  L     G R+++ D+ ++++E S+  VA + +A A+R L  DG++ FNER+Q+  VR
Sbjct:  104 KLPPTLLSRFDLIYLILDAPNADSDRQLAQHLVGLYYEKPNVVKPPMDTQLLKDYIDYARENISPRLSDEASEELLNSYLELRNPPGGNVGNNGTRTISATPRQLESLIRTSEALAKMKYSSIVSRADAKEAVRLLKVATQAAATDPRTGRIDMDMINTGRTEVEREMGETLYLGLKEFLVERR-GNRLAVRDVAKQLSEISNTQVAQDEVADALRRLEADGMVQFNERSQSVFVR 338          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A7S3Q726_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q726_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.490e-70
Identity = 135/238 (56.72%), Postives = 172/238 (72.27%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGG-----RGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAE-QSDAPVAANNLAQAVRLLADDGLLHFNERTQTAVVRA 696
            +LPPTLLSRFDLIYLVLD PN +GDRRLA+H+VGLY + P    PP++QS LRD+IAYAR +V P LT+ A  +L+  YL+MR+MG       G++TI+ATPRQLESLIRLSE +A+MRFSR +E  DV EAVRLM+VATQ AATDPRTG IDMDMI TGR   +RE   AL   ++ LLA    G R+++ D+RR++ E  +   +   ++ +A+RL   DGL+  NER QT  VRA
Sbjct:  966 KLPPTLLSRFDLIYLVLDAPNVEGDRRLAQHLVGLYYETPNVIQPPLDQSFLRDYIAYARDNVFPELTDLATKELIMAYLEMRKMGSSSGGNNGSRTISATPRQLESLIRLSEGIAKMRFSRLLERSDVREAVRLMKVATQAAATDPRTGRIDMDMITTGRSTANREMEEALNLSLKELLAERR-GNRMAVVDVRRQLTEIMNITSIKQEDVMEALRLAEGDGLIQLNERAQTIFVRA 1202          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A7S0CFL6_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFL6_9STRA)

HSP 1 Score: 224 bits (570), Expect = 3.360e-70
Identity = 128/236 (54.24%), Postives = 165/236 (69.92%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGGR---GTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAP-VAANNLAQAVRLLADDGLLHFNERTQTAVVRA 696
            +LPPTLLSRFDLIYL+LD PN + DRRLA H+VGLY + P    P I Q LL+D+IAYAR  + P L++ A   L+ GYL+MRR+G     GT TI+ATPRQLESLIRLSE LA+MR S  V   DV EA+RLM+VATQ AATDPRTG IDMDMI TGR  V+R++   L   ++ L A    G R+S+ D++R++AE ++   +    L++ +R L  DG + +NER+QT  VRA
Sbjct:    5 QLPPTLLSRFDLIYLILDHPNIERDRRLANHLVGLYYETPTVVTPRIPQILLKDYIAYARDTIVPELSDLATQTLISGYLEMRRLGHSQRSGTGTISATPRQLESLIRLSEGLAKMRLSTEVTRSDVHEALRLMKVATQAAATDPRTGRIDMDMIATGRAQVERQSREGLNTALKELFAERR-GTRMSVSDIKRQLAEVTNMTNLTQEELSELLRTLDADGFVQYNERSQTLFVRA 239          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A8J9WYV4_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WYV4_PHATR)

HSP 1 Score: 228 bits (581), Expect = 5.320e-70
Identity = 122/236 (51.69%), Postives = 167/236 (70.76%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGG-----RGTKTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAPVAANNLAQAVRLLADDGLLHFNERTQTAVVR 693
            +LPPTLLSRFDLIYL+LD PN + DRRLA+H+VGLY + P    PP++Q+LLRD+IAYAR ++HP +++ A  +LV  YL MR   G      GT+TI+ATPRQLESLIRLSE LA+MR+S  V   D  EAVRLM+VATQ AATDPRTG IDMDMI TG+ + DR+    +   ++ L A    G R+++ D+ +++AE ++A +  + + +A+R +  DG++ + ER QT  VR
Sbjct:  145 QLPPTLLSRFDLIYLILDSPNMEQDRRLAQHLVGLYYETPNVVQPPLDQALLRDYIAYARDNIHPEISDEAADELVSSYLTMRNPPGGGAAAAGTRTISATPRQLESLIRLSEGLAKMRYSSIVSRADALEAVRLMKVATQAAATDPRTGRIDMDMITTGKSSADRQLEEQITLTLQELFAERR-GTRMAVRDVTKQLAEITNATIPHDEVVKALRQMEADGVIQYQERAQTIFVR 379          
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Match: A0A7S2LAC5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LAC5_9STRA)

HSP 1 Score: 241 bits (614), Expect = 7.830e-70
Identity = 129/236 (54.66%), Postives = 167/236 (70.76%), Query Frame = 1
Query:    1 RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQSLLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGGRGT----KTITATPRQLESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMDMINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAPVAANNLAQAVRLLADDGLLHFNERTQTAVVRA 696
            +LPPTLLSRFDLIYL+LD PN D DR L +H+VGLY + P    PP++  LLRD+IAYAR ++HP L++ A  +L+  Y++MRR G  G     +TI+ATPRQLESLIRLSE+LARMRFSR V   DV EAVRLM+VATQ AATDPRTG IDMDMI TGR  ++RE    LG  ++ LL     G R+S+ ++RR M E  +  +   +L + +R+   DGL+ ++ER+QT  VRA
Sbjct:  844 QLPPTLLSRFDLIYLILDAPNVDNDRMLGQHLVGLYYETPNVVEPPLDHGLLRDYIAYARENIHPELSDLASRELISAYIEMRRGGSHGNGGRGRTISATPRQLESLIRLSESLARMRFSRVVTRTDVREAVRLMKVATQAAATDPRTGRIDMDMITTGRSTLERELEENLGASLKELLIERR-GNRMSVSEIRRTMEELLNTQIQQEDLTEVLRMFEADGLVQYSERSQTVFVRA 1078          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8004.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XXI7_9STRA2.780e-8159.74DNA replication licensing factor MCM4 n=1 Tax=Fibr... [more]
A0A7S4R0L5_9STRA1.660e-7856.78DNA replication licensing factor MCM4 n=1 Tax=Dity... [more]
D7FQ67_ECTSI3.020e-7666.33MCM domain-containing protein n=2 Tax=Ectocarpus T... [more]
B8C649_THAPS1.290e-7255.27DNA replication licensing factor MCM4 n=1 Tax=Thal... [more]
A0A7S4IIL2_9STRA1.630e-7253.69Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0Y7K6_9STRA2.760e-7152.54DNA replication licensing factor MCM4 n=1 Tax=Pseu... [more]
A0A7S3Q726_9STRA1.490e-7056.72Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0CFL6_9STRA3.360e-7054.24Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A8J9WYV4_PHATR5.320e-7051.69Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S2LAC5_9STRA7.830e-7054.66Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8004contigP-wetherbeei_contig8004:1326..2821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FQ67
Preferred nameMCM4
PFAMsMCM,MCM_N,MCM_OB
Model size705
Max annot lvl2759|Eukaryota
KEGG koko:K02212
KEGG Pathwayko03030,ko04110,ko04111,ko04113,map03030,map04110,map04111,map04113
KEGG ModuleM00285
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000727,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003688,GO:0003690,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006268,GO:0006270,GO:0006271,GO:0006275,GO:0006279,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0010639,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0022607,GO:0022616,GO:0030174,GO:0030874,GO:0030875,GO:0031261,GO:0031298,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032780,GO:0032991,GO:0032993,GO:0033043,GO:0033044,GO:0033260,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0036387,GO:0036388,GO:0042555,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043462,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044786,GO:0045005,GO:0045934,GO:0046483,GO:0048478,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051095,GO:0051097,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051276,GO:0051321,GO:0051336,GO:0051346,GO:0051716,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0071103,GO:0071162,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097373,GO:1901360,GO:1901363,GO:1901576,GO:1902292,GO:1902299,GO:1902315,GO:1902449,GO:1902450,GO:1902969,GO:1902975,GO:1903046,GO:1903047,GO:1905462,GO:1905463,GO:1905774,GO:1905775,GO:1990837,GO:2000104,GO:2000112,GO:2000113,GO:2001251
Exons4
Evalue4.95e-77
EggNOG OGsCOG1241@1|root,KOG0478@2759|Eukaryota
EC3.6.4.12
DescriptionDNA replication initiation
Cds size705
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187015.1302702-CDS-P-wetherbeei_contig8004:1325..15671683187015.1302702-CDS-P-wetherbeei_contig8004:1325..1567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8004 1326..1567 -
1683187015.142559-CDS-P-wetherbeei_contig8004:1824..19941683187015.142559-CDS-P-wetherbeei_contig8004:1824..1994Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8004 1825..1994 -
1683187015.1516154-CDS-P-wetherbeei_contig8004:2296..25011683187015.1516154-CDS-P-wetherbeei_contig8004:2296..2501Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8004 2297..2501 -
1683187015.1601553-CDS-P-wetherbeei_contig8004:2733..28211683187015.1601553-CDS-P-wetherbeei_contig8004:2733..2821Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8004 2734..2821 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8004.1.1prot_P-wetherbeei_contig8004.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8004 1326..2821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8004.1.1

>prot_P-wetherbeei_contig8004.1.1 ID=prot_P-wetherbeei_contig8004.1.1|Name=mRNA_P-wetherbeei_contig8004.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp
RLPPTLLSRFDLIYLVLDRPNQDGDRRLARHMVGLYLQKPEAPAPPINQS
LLRDFIAYARRHVHPRLTEPAVHDLVRGYLDMRRMGGRGTKTITATPRQL
ESLIRLSEALARMRFSRYVESRDVTEAVRLMRVATQTAATDPRTGTIDMD
MINTGRGAVDRETVRALGEEVRALLAGTPPGARVSMGDLRRRMAEQSDAP
VAANNLAQAVRLLADDGLLHFNERTQTAVVRAHS*
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mRNA from alignment at P-wetherbeei_contig8004:1326..2821-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8004.1.1 ID=mRNA_P-wetherbeei_contig8004.1.1|Name=mRNA_P-wetherbeei_contig8004.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1496bp|location=Sequence derived from alignment at P-wetherbeei_contig8004:1326..2821- (Phaeothamnion wetherbeei SAG_119_79)
CGCCTGCCGCCGACGCTGCTGTCGCGTTTTGACCTCATTTACTTGGTGTT GGACCGGCCCAACCAGGACGGCGACCGCCGCCTGGCCCGTGAGTTTAGGG TTATTGGTTGTGCGCATGAGATGCTGTGTGGTGGAAGTTTTCTGTTTTCG AAATCTGCCTTGCTCGCGGACTGGCATTCTGTGACGAAGCCCTAGTGCAT TATTCCTCATCTATAGGCTGGACGCTAAACTGCCATGGTGGTGTCTTTCC GATTCTGACGTGTCCTCCGGAACTGAACCTGTGTTTCGCTTTTTCTTTTC CCTCGGCGGCGAGGAAGCAGGCCACATGGTGGGGCTGTACCTGCAAAAGC CCGAGGCGCCCGCCCCGCCCATCAACCAGTCGCTGCTGCGCGACTTTATT GCCTACGCGCGGCGCCACGTGCACCCGCGGCTGACGGAGCCCGCTGTGCA CGACCTCGTCCGCGGCTACCTCGACATGCGGCGGATGGGGGGGCGCGGCA CTAAGACCATCACCGCCACGCCCCGGTGAGGGGGATAGGGTGCGGTGGGA GGGAGGGGGTAGGATGTGCAGGGACGAATGCGGGCAACGCCGTGTTGAGC CAATCGGGAGTGGGCTTCGATGTTTGCTTGTCTTGTGTTGTGGACGGGGT CCCCCCCCCTTCCCTTCAGCATTCCTTGTCAGGATGTGTTGGGCCGAGCG CTTGCTGCTCGCTTGGAAAAATTGTTCTGTGACTTACAGTAGTGTTGAAA GCAGTCTACAGAAGTAAGCCCCTCTGACGTCGCTCTCTTTCCGCGCCTTG GCCCGCTGCCGCCCGTTACTTCTGCAGGCAACTGGAGAGCCTGATCCGTC TGTCGGAGGCGCTGGCCCGCATGCGGTTCTCGCGCTACGTGGAATCGCGT GACGTGACAGAGGCGGTGCGGTTGATGCGCGTCGCCACGCAGACCGCCGC CACCGACCCGCGGACTGGCACCATCGACATGGACATGATCAACACCGGTG AGTCGGTAGCAGCGGAACATCAGTCGTTTTCTGAAGGATTTTTAGTTAGA TCGATATGGATCTCAAAATTTTGCTCATTTTGCTGCTTTTGCTATCAGTA CACGCGTTGAATGTTGAAGTACAATGCTGCAGGCGAGGCGCCCTTCCTTA ATAAGGAAAGCTTGCGCCATCGCCGTCGACTCTTTGACCGCCACTGCCAT CAATCACCTCTTTGCTGCTATTCGACTCTTTGCTATTTCCCGTACTGGCG GCAGGGCGTGGTGCCGTGGACCGCGAGACGGTCCGCGCCCTTGGCGAAGA GGTCCGCGCGCTGCTCGCTGGCACTCCGCCGGGCGCCCGCGTCTCGATGG GAGACCTCCGGCGGCGCATGGCGGAACAGAGCGACGCGCCCGTGGCAGCC AACAACCTGGCGCAGGCGGTGCGACTGCTGGCGGACGACGGGCTGCTGCA CTTCAACGAGCGGACGCAGACCGCCGTCGTGCGGGCCCACTCGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8004:1326..2821-

>mRNA_P-wetherbeei_contig8004.1.1 ID=mRNA_P-wetherbeei_contig8004.1.1|Name=mRNA_P-wetherbeei_contig8004.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig8004:1326..2821- (Phaeothamnion wetherbeei SAG_119_79)
CGCCTGCCGCCGACGCTGCTGTCGCGTTTTGACCTCATTTACTTGGTGTT
GGACCGGCCCAACCAGGACGGCGACCGCCGCCTGGCCCGCCACATGGTGG
GGCTGTACCTGCAAAAGCCCGAGGCGCCCGCCCCGCCCATCAACCAGTCG
CTGCTGCGCGACTTTATTGCCTACGCGCGGCGCCACGTGCACCCGCGGCT
GACGGAGCCCGCTGTGCACGACCTCGTCCGCGGCTACCTCGACATGCGGC
GGATGGGGGGGCGCGGCACTAAGACCATCACCGCCACGCCCCGGCAACTG
GAGAGCCTGATCCGTCTGTCGGAGGCGCTGGCCCGCATGCGGTTCTCGCG
CTACGTGGAATCGCGTGACGTGACAGAGGCGGTGCGGTTGATGCGCGTCG
CCACGCAGACCGCCGCCACCGACCCGCGGACTGGCACCATCGACATGGAC
ATGATCAACACCGGGCGTGGTGCCGTGGACCGCGAGACGGTCCGCGCCCT
TGGCGAAGAGGTCCGCGCGCTGCTCGCTGGCACTCCGCCGGGCGCCCGCG
TCTCGATGGGAGACCTCCGGCGGCGCATGGCGGAACAGAGCGACGCGCCC
GTGGCAGCCAACAACCTGGCGCAGGCGGTGCGACTGCTGGCGGACGACGG
GCTGCTGCACTTCAACGAGCGGACGCAGACCGCCGTCGTGCGGGCCCACT
CGTAA
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